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Cow genome map

           
Conread name:
           
Pig1-107L24
        

               
Conread position:
               
1-168
               

               
Cow position:
               
chr4:2713681-2713854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
48, 6
               

               
Conread position:
               
1-538
               

               
Cow position:
               
chr4:10732397-10731832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 69
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr4:23271460-23271297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
2-170
               

               
Cow position:
               
chr4:61999022-61999197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 41
               

               
Conread position:
               
2-188
               

               
Cow position:
               
chr4:8083632-8083812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
137, 56
               

               
Conread position:
               
2-327
               

               
Cow position:
               
chr4:68569468-68569813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr4:31348024-31348360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
138, 51
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr4:31859444-31859095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 259
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr4:56570967-56570630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 51
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr4:59105510-59105655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
3-150
               

               
Cow position:
               
chr4:19420580-19420732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
3-150
               

               
Cow position:
               
chr4:23943468-23943620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
3-165
               

               
Cow position:
               
chr4:36876681-36876848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 121
               

               
Conread position:
               
3-165
               

               
Cow position:
               
chr4:44681085-44681242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
136, 40
               

               
Conread position:
               
3-166
               

               
Cow position:
               
chr4:26012306-26012137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
3-167
               

               
Cow position:
               
chr4:5250366-5250195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
3-167
               

               
Cow position:
               
chr4:58045457-58045627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
3-169
               

               
Cow position:
               
chr4:25802869-25802696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-169
               

               
Cow position:
               
chr4:30691177-30691010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr4:4647577-4647404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
61, 35
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr4:39092059-39091895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
136, 153
               

               
Conread position:
               
3-173
               

               
Cow position:
               
chr4:11186142-11185965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
3-173
               

               
Cow position:
               
chr4:12245386-12245214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
66, 128
               

               
Conread position:
               
3-173
               

               
Cow position:
               
chr4:56236378-56236550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 40
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr4:46656309-46656130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-176
               

               
Cow position:
               
chr4:21553917-21554083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
133, 62
               

               
Conread position:
               
3-176
               

               
Cow position:
               
chr4:22849327-22849493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
158, 55
               

               
Conread position:
               
3-177
               

               
Cow position:
               
chr4:27511723-27511542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-177
               

               
Cow position:
               
chr4:42347662-42347482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
49, 79
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr4:22482495-22482319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 56
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr4:23059677-23059859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr4:45964065-45963880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr4:61214681-61214855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
143, 75
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr4:63078401-63078219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-179
               

               
Cow position:
               
chr4:45483979-45483794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 88
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr4:30648022-30647853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
157, 50
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr4:34722709-34722893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr4:38949353-38949543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr4:39010229-39010043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
57, 85
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chr4:55694345-55694173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chr4:59015755-59015585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
136, 27
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chr4:66168163-66168339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr4:50837878-50837691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
66, 172
               

               
Conread position:
               
3-185
               

               
Cow position:
               
chr4:17790121-17790302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
136, 25
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chr4:54880899-54881087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 156
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr4:19496675-19496479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr4:53819509-53819701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
3-194
               

               
Cow position:
               
chr4:67393270-67393072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr4:27521735-27521530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
60, 153
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr4:59001963-59002162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr4:61608793-61608988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
136, 13
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr4:6072876-6073076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
49, 143
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr4:14131600-14131410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr4:20124793-20124995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr4:46560354-46560153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
95, 55
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr4:6093889-6094094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
36, 118
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr4:7698440-7698238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr4:14020674-14020472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 141
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr4:31177997-31177798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
136, 187
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr4:38209800-38210003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr4:43542307-43542499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
137, 49
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr4:46883492-46883701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr4:47305256-47305049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr4:51986399-51986609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr4:32562007-32561794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
48, 80
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr4:37343295-37343092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
135, 108
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr4:50687690-50687897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
49, 110
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr4:40995909-40995694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
49, 153
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chr4:26959791-26960009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
49, 79
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr4:3853654-3853431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
48, 205
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr4:66380161-66380380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
3-217
               

               
Cow position:
               
chr4:42231858-42232065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
136, 34
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr4:33181719-33181502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
51, 212
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr4:19199108-19199331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr4:47125663-47125890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr4:47748589-47748371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
23, 83
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr4:62370484-62370247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
140, 77
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr4:44183945-44184192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
135, 39
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr4:19292889-19292634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr4:19573464-19573191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
60, 203
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr4:24092956-24093244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 74
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr4:46136924-46136644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 51
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr4:2774898-2774609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr4:45725039-45724767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
143, 61
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr4:46494476-46494183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
3-279
               

               
Cow position:
               
chr4:13026469-13026188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
27, 34
               

               
Conread position:
               
3-279
               

               
Cow position:
               
chr4:19102701-19102992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
57, 193
               

               
Conread position:
               
3-281
               

               
Cow position:
               
chr4:38156918-38157207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
136, 51
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr4:22546668-22546959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 108
               

               
Conread position:
               
3-288
               

               
Cow position:
               
chr4:12474026-12473727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 130
               

               
Conread position:
               
3-291
               

               
Cow position:
               
chr4:25227109-25226823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
205, 62
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr4:37732304-37732612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
3-296
               

               
Cow position:
               
chr4:7043642-7043954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
49, 79
               

               
Conread position:
               
3-312
               

               
Cow position:
               
chr4:4827308-4826980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
3-312
               

               
Cow position:
               
chr4:18756612-18756288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
3-314
               

               
Cow position:
               
chr4:47262712-47262385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
3-315
               

               
Cow position:
               
chr4:20026930-20027249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
76, 92
               

               
Conread position:
               
3-316
               

               
Cow position:
               
chr4:54171800-54171473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr4:36290797-36290472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
136, 144
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr4:45685628-45685303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 45
               

               
Conread position:
               
3-334
               

               
Cow position:
               
chr4:62317622-62317277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr4:656633-656981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 127
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr4:12127464-12127807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 332
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr4:21088693-21089038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
49, 100
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr4:51851387-51851033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
49, 323
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr4:13344711-13344377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
136, 285
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr4:34022411-34022756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 23
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr4:62472251-62471903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr4:202968-203312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr4:4320818-4321172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 204
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr4:13284559-13284210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
33, 130
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr4:22138041-22138402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 319
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr4:22713320-22713661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 39
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr4:30974509-30974170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 145
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr4:32458681-32459032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
49, 326
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr4:43515898-43515556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 147
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr4:22101086-22101428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 301
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr4:43740706-43740350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
136, 73
               

               
Conread position:
               
3-339
               

               
Cow position:
               
chr4:16881198-16881535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
138, 13
               

               
Conread position:
               
3-339
               

               
Cow position:
               
chr4:19709118-19708769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 246
               

               
Conread position:
               
3-339
               

               
Cow position:
               
chr4:29384066-29384391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
135, 54
               

               
Conread position:
               
3-339
               

               
Cow position:
               
chr4:45076904-45077245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 291
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr4:20147360-20147009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 296
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr4:27632616-27632277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
3-344
               

               
Cow position:
               
chr4:48322212-48321847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 84
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr4:35982173-35981815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
56, 93
               

               
Conread position:
               
3-346
               

               
Cow position:
               
chr4:17186173-17186531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
30, 158
               

               
Conread position:
               
3-346
               

               
Cow position:
               
chr4:23444863-23445231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 108
               

               
Conread position:
               
3-346
               

               
Cow position:
               
chr4:56591217-56590856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
34, 155
               

               
Conread position:
               
3-350
               

               
Cow position:
               
chr4:38946394-38946026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
49, 153
               

               
Conread position:
               
3-379
               

               
Cow position:
               
chr4:22860552-22860935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
135, 54
               

               
Conread position:
               
3-380
               

               
Cow position:
               
chr4:13222005-13222406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
33, 173
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr4:11897127-11897545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 133
               

               
Conread position:
               
3-398
               

               
Cow position:
               
chr4:12676970-12676565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 79
               

               
Conread position:
               
3-411
               

               
Cow position:
               
chr4:1985826-1985388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
66, 295
               

               
Conread position:
               
3-413
               

               
Cow position:
               
chr4:66547588-66548016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 306
               

               
Conread position:
               
3-416
               

               
Cow position:
               
chr4:8770269-8769844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 73
               

               
Conread position:
               
3-418
               

               
Cow position:
               
chr4:29291681-29291254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 62
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr4:29805194-29805630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 149
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr4:3837443-3837002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
108, 40
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr4:44613180-44612729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 90
               

               
Conread position:
               
3-425
               

               
Cow position:
               
chr4:59785495-59785041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 305
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr4:15439761-15439321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 303
               

               
Conread position:
               
3-440
               

               
Cow position:
               
chr4:51728249-51727793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 62
               

               
Conread position:
               
3-446
               

               
Cow position:
               
chr4:14414179-14414640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
216, 20
               

               
Conread position:
               
3-455
               

               
Cow position:
               
chr4:45775155-45775646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 421
               

               
Conread position:
               
3-484
               

               
Cow position:
               
chr4:49629661-49629149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 295
               

               
Conread position:
               
3-484
               

               
Cow position:
               
chr4:68764694-68764183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 122
               

               
Conread position:
               
3-487
               

               
Cow position:
               
chr4:1060104-1060599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 108
               

               
Conread position:
               
3-496
               

               
Cow position:
               
chr4:60897118-60897619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 51
               

               
Conread position:
               
3-497
               

               
Cow position:
               
chr4:44496537-44496039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
137, 43
               

               
Conread position:
               
3-507
               

               
Cow position:
               
chr4:11187627-11187102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 261
               

               
Conread position:
               
3-510
               

               
Cow position:
               
chr4:40414453-40414991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 302
               

               
Conread position:
               
3-512
               

               
Cow position:
               
chr4:13668443-13668975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 413
               

               
Conread position:
               
3-515
               

               
Cow position:
               
chr4:23646695-23647207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 75
               

               
Conread position:
               
3-516
               

               
Cow position:
               
chr4:43909940-43909405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 325
               

               
Conread position:
               
3-529
               

               
Cow position:
               
chr4:34210212-34209652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
3-531
               

               
Cow position:
               
chr4:19238393-19237862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
3-538
               

               
Cow position:
               
chr4:4084282-4084836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 52
               

               
Conread position:
               
3-538
               

               
Cow position:
               
chr4:19315832-19316371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 141
               

               
Conread position:
               
3-538
               

               
Cow position:
               
chr4:41186226-41186753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 61
               

               
Conread position:
               
3-538
               

               
Cow position:
               
chr4:49794825-49794294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 49
               

               
Conread position:
               
3-538
               

               
Cow position:
               
chr4:59871656-59871117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 144
               

               
Conread position:
               
3-542
               

               
Cow position:
               
chr4:18974601-18974048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 258
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr4:961490-962043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
135, 50
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr4:3421799-3421251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 250
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr4:5609916-5610463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 92
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr4:7964472-7965043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 93
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr4:9444507-9445083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 292
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr4:10968222-10968756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 21
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr4:13326776-13327348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 154
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr4:13590262-13589701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 295
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr4:15905281-15904714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 312
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr4:19435424-19434866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 13
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr4:26323919-26323348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 301
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr4:32259664-32260241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
3-544
               

               
Cow position:
               
chr4:46527179-46526606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 512
               

               
Conread position:
               
3-546
               

               
Cow position:
               
chr4:25370269-25369723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 49
               

               
Conread position:
               
3-555
               

               
Cow position:
               
chr4:21531465-21532034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 306
               

               
Conread position:
               
3-555
               

               
Cow position:
               
chr4:49158617-49159169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
49, 195
               

               
Conread position:
               
3-559
               

               
Cow position:
               
chr4:27276370-27276951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
3-563
               

               
Cow position:
               
chr4:53208458-53207895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 55
               

               
Conread position:
               
3-565
               

               
Cow position:
               
chr4:7704141-7704721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 269
               

               
Conread position:
               
4-177
               

               
Cow position:
               
chr4:5790820-5790642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
48, 167
               

               
Conread position:
               
4-182
               

               
Cow position:
               
chr4:30769206-30769029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
134, 115
               

               
Conread position:
               
4-199
               

               
Cow position:
               
chr4:13919154-13918957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
9, 153
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr4:15236798-15236608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
135, 48
               

               
Conread position:
               
4-253
               

               
Cow position:
               
chr4:44772865-44773132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr4:32693962-32693685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
4-268
               

               
Cow position:
               
chr4:45837455-45837734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
50, 37
               

               
Conread position:
               
4-306
               

               
Cow position:
               
chr4:54871849-54872166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 305
               

               
Conread position:
               
4-314
               

               
Cow position:
               
chr4:45250147-45249829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
4-332
               

               
Cow position:
               
chr4:19500914-19501249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr4:19745044-19744716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr4:20327548-20327879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
135, 57
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr4:29107085-29106733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
48, 204
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr4:45582948-45583294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
30, 49
               

               
Conread position:
               
4-339
               

               
Cow position:
               
chr4:2885372-2885716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
139, 45
               

               
Conread position:
               
4-342
               

               
Cow position:
               
chr4:61388893-61389249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 139
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr4:28771895-28772245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
135, 292
               

               
Conread position:
               
4-422
               

               
Cow position:
               
chr4:46061122-46060674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 293
               

               
Conread position:
               
4-458
               

               
Cow position:
               
chr4:23450916-23451404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
4-477
               

               
Cow position:
               
chr4:37915164-37915656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 163
               

               
Conread position:
               
4-491
               

               
Cow position:
               
chr4:46383191-46383712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 305
               

               
Conread position:
               
4-494
               

               
Cow position:
               
chr4:42423631-42424144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 246
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr4:45706210-45705976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
5-337
               

               
Cow position:
               
chr4:27344509-27344841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
100, 45
               

               
Conread position:
               
5-337
               

               
Cow position:
               
chr4:52823229-52823574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 251
               

               
Conread position:
               
5-446
               

               
Cow position:
               
chr4:33910432-33910010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
123, 60
               

               
Conread position:
               
6-177
               

               
Cow position:
               
chr4:60955494-60955327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
133, 59
               

               
Conread position:
               
6-203
               

               
Cow position:
               
chr4:58018515-58018316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
130, 177
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr4:36929468-36929147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
206, 59
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr4:55270594-55270927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
46, 81
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr4:16594248-16593905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 28
               

               
Conread position:
               
6-538
               

               
Cow position:
               
chr4:58248575-58248024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 148
               

               
Conread position:
               
6-544
               

               
Cow position:
               
chr4:27755134-27755699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 54
               

               
Conread position:
               
6-544
               

               
Cow position:
               
chr4:34383166-34383742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 146
               

               
Conread position:
               
7-170
               

               
Cow position:
               
chr4:42044803-42044970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
7-196
               

               
Cow position:
               
chr4:3299627-3299818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
133, 103
               

               
Conread position:
               
7-219
               

               
Cow position:
               
chr4:38358652-38358865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
7-281
               

               
Cow position:
               
chr4:12901384-12901670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
7-346
               

               
Cow position:
               
chr4:10999536-10999882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 192
               

               
Conread position:
               
7-544
               

               
Cow position:
               
chr4:13142408-13142917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
337, 46
               

               
Conread position:
               
8-498
               

               
Cow position:
               
chr4:508737-509247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 242
               

               
Conread position:
               
9-516
               

               
Cow position:
               
chr4:34209107-34208562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
53, 85
               

               
Conread position:
               
9-546
               

               
Cow position:
               
chr4:12004387-12003827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 152
               

               
Conread position:
               
10-336
               

               
Cow position:
               
chr4:25888675-25888999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 48
               

               
Conread position:
               
12-167
               

               
Cow position:
               
chr4:24356675-24356518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
12-176
               

               
Cow position:
               
chr4:42080536-42080703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
12-193
               

               
Cow position:
               
chr4:29247031-29247219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
12-272
               

               
Cow position:
               
chr4:41900134-41899874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
40, 104
               

               
Conread position:
               
12-430
               

               
Cow position:
               
chr4:17052419-17052876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 301
               

               
Conread position:
               
12-555
               

               
Cow position:
               
chr4:28836704-28836125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 105
               

               
Conread position:
               
13-161
               

               
Cow position:
               
chr4:53601970-53601822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
126, 106
               

               
Conread position:
               
13-335
               

               
Cow position:
               
chr4:34310297-34310619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
13-502
               

               
Cow position:
               
chr4:2681497-2681016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
14-155
               

               
Cow position:
               
chr4:43579249-43579393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
14-178
               

               
Cow position:
               
chr4:348263-348428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
14-311
               

               
Cow position:
               
chr4:19333550-19333255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
47, 208
               

               
Conread position:
               
14-345
               

               
Cow position:
               
chr4:13941615-13941281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
14-482
               

               
Cow position:
               
chr4:56239697-56240178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 275
               

               
Conread position:
               
16-216
               

               
Cow position:
               
chr4:19430526-19430324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
16-253
               

               
Cow position:
               
chr4:61188704-61188956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
16-273
               

               
Cow position:
               
chr4:13338989-13338726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
7, 153
               

               
Conread position:
               
16-414
               

               
Cow position:
               
chr4:37691146-37691572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
16-532
               

               
Cow position:
               
chr4:15635288-15635825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 45
               

               
Conread position:
               
17-199
               

               
Cow position:
               
chr4:44786199-44786018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
121, 31
               

               
Conread position:
               
17-238
               

               
Cow position:
               
chr4:47038930-47038697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
17-290
               

               
Cow position:
               
chr4:19578547-19578278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
18-336
               

               
Cow position:
               
chr4:3820590-3820253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
35, 124
               

               
Conread position:
               
19-316
               

               
Cow position:
               
chr4:45862572-45862270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
19-334
               

               
Cow position:
               
chr4:23509752-23509425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 128
               

               
Conread position:
               
19-523
               

               
Cow position:
               
chr4:3388706-3388175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 101
               

               
Conread position:
               
21-332
               

               
Cow position:
               
chr4:2099791-2099468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 193
               

               
Conread position:
               
21-544
               

               
Cow position:
               
chr4:6653881-6653353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 74
               

               
Conread position:
               
26-161
               

               
Cow position:
               
chr4:22050960-22051102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
26-182
               

               
Cow position:
               
chr4:34234621-34234463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
26-238
               

               
Cow position:
               
chr4:45626480-45626692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
113, 39
               

               
Conread position:
               
26-290
               

               
Cow position:
               
chr4:45074210-45073939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
42, 5
               

               
Conread position:
               
26-532
               

               
Cow position:
               
chr4:33096833-33097340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 44
               

               
Conread position:
               
26-536
               

               
Cow position:
               
chr4:53126258-53125751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 39
               

               
Conread position:
               
26-555
               

               
Cow position:
               
chr4:38999577-38999028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 194
               

               
Conread position:
               
31-166
               

               
Cow position:
               
chr4:13520735-13520867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
108, 19
               

               
Conread position:
               
31-173
               

               
Cow position:
               
chr4:56805319-56805182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
32-173
               

               
Cow position:
               
chr4:479647-479790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
32-336
               

               
Cow position:
               
chr4:23600315-23600006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
34, 170
               

               
Conread position:
               
37-333
               

               
Cow position:
               
chr4:9925490-9925801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
38-190
               

               
Cow position:
               
chr4:61268328-61268176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
101, 37
               

               
Conread position:
               
42-182
               

               
Cow position:
               
chr4:41780105-41780246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
42-202
               

               
Cow position:
               
chr4:19539103-19539264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
42-346
               

               
Cow position:
               
chr4:2602364-2602056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
166, 54
               

               
Conread position:
               
42-529
               

               
Cow position:
               
chr4:21391677-21392175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 133
               

               
Conread position:
               
43-336
               

               
Cow position:
               
chr4:27530252-27529948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
43-415
               

               
Cow position:
               
chr4:46597501-46597118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 97
               

               
Conread position:
               
45-275
               

               
Cow position:
               
chr4:37675744-37675505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
24, 5
               

               
Conread position:
               
45-337
               

               
Cow position:
               
chr4:26401085-26400790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 25
               

               
Conread position:
               
47-308
               

               
Cow position:
               
chr4:48173265-48172998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
92, 243
               

               
Conread position:
               
47-332
               

               
Cow position:
               
chr4:48961357-48961645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
152, 200
               

               
Conread position:
               
47-555
               

               
Cow position:
               
chr4:54191218-54190703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 121
               

               
Conread position:
               
48-325
               

               
Cow position:
               
chr4:62771799-62772083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
92, 26
               

               
Conread position:
               
48-418
               

               
Cow position:
               
chr4:33623839-33623450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
92, 15
               

               
Conread position:
               
49-169
               

               
Cow position:
               
chr4:21532971-21533090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
49-181
               

               
Cow position:
               
chr4:46761734-46761603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
90, 121
               

               
Conread position:
               
49-189
               

               
Cow position:
               
chr4:1236747-1236887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
89, 41
               

               
Conread position:
               
49-201
               

               
Cow position:
               
chr4:19456560-19456713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
49-201
               

               
Cow position:
               
chr4:54937208-54937051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
49-203
               

               
Cow position:
               
chr4:45909851-45910005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
90, 41
               

               
Conread position:
               
49-219
               

               
Cow position:
               
chr4:51920669-51920499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
91, 16
               

               
Conread position:
               
49-298
               

               
Cow position:
               
chr4:46528859-46529100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
91, 156
               

               
Conread position:
               
49-336
               

               
Cow position:
               
chr4:19700222-19699937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
185, 89
               

               
Conread position:
               
49-337
               

               
Cow position:
               
chr4:43148540-43148237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
13, 223
               

               
Conread position:
               
49-337
               

               
Cow position:
               
chr4:46591793-46591494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 26
               

               
Conread position:
               
49-345
               

               
Cow position:
               
chr4:49813553-49813845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
90, 157
               

               
Conread position:
               
49-345
               

               
Cow position:
               
chr4:51769229-51768934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 21
               

               
Conread position:
               
49-398
               

               
Cow position:
               
chr4:19321949-19322327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 261
               

               
Conread position:
               
49-401
               

               
Cow position:
               
chr4:11496525-11496863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
91, 11
               

               
Conread position:
               
49-424
               

               
Cow position:
               
chr4:63349364-63349750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 59
               

               
Conread position:
               
49-497
               

               
Cow position:
               
chr4:10905343-10905803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 59
               

               
Conread position:
               
49-544
               

               
Cow position:
               
chr4:36577500-36577988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 257
               

               
Conread position:
               
50-162
               

               
Cow position:
               
chr4:56852973-56852863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
50-170
               

               
Cow position:
               
chr4:30845497-30845376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
50-182
               

               
Cow position:
               
chr4:65806021-65805886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
50-184
               

               
Cow position:
               
chr4:51708191-51708056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
50-202
               

               
Cow position:
               
chr4:50676044-50676197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 93
               

               
Conread position:
               
50-203
               

               
Cow position:
               
chr4:10958868-10958709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
50-204
               

               
Cow position:
               
chr4:30795219-30795369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
50-216
               

               
Cow position:
               
chr4:48902499-48902666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
50-251
               

               
Cow position:
               
chr4:1997-1786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
50-269
               

               
Cow position:
               
chr4:20142786-20143007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
158, 69
               

               
Conread position:
               
50-276
               

               
Cow position:
               
chr4:45013051-45013275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 40
               

               
Conread position:
               
50-277
               

               
Cow position:
               
chr4:19098598-19098357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
50-292
               

               
Cow position:
               
chr4:47280253-47280012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
89, 43
               

               
Conread position:
               
50-301
               

               
Cow position:
               
chr4:45636292-45636028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
50-332
               

               
Cow position:
               
chr4:59378035-59377748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 198
               

               
Conread position:
               
50-336
               

               
Cow position:
               
chr4:7847154-7847434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
89, 192
               

               
Conread position:
               
50-336
               

               
Cow position:
               
chr4:11218877-11218589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
92, 116
               

               
Conread position:
               
50-336
               

               
Cow position:
               
chr4:58880836-58881132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
89, 30
               

               
Conread position:
               
50-337
               

               
Cow position:
               
chr4:19584829-19584538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
89, 102
               

               
Conread position:
               
50-337
               

               
Cow position:
               
chr4:30792092-30791798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
50-339
               

               
Cow position:
               
chr4:45367865-45367561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
50-345
               

               
Cow position:
               
chr4:13973844-13974150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 242
               

               
Conread position:
               
50-346
               

               
Cow position:
               
chr4:19549118-19548817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
50-346
               

               
Cow position:
               
chr4:36893486-36893179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
9, 185
               

               
Conread position:
               
50-448
               

               
Cow position:
               
chr4:18095547-18095971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
29, 122
               

               
Conread position:
               
50-457
               

               
Cow position:
               
chr4:45662387-45662807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 60
               

               
Conread position:
               
50-537
               

               
Cow position:
               
chr4:41300872-41301387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 43
               

               
Conread position:
               
50-538
               

               
Cow position:
               
chr4:46476820-46477326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
91, 168
               

               
Conread position:
               
50-539
               

               
Cow position:
               
chr4:9795258-9795760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 90
               

               
Conread position:
               
50-544
               

               
Cow position:
               
chr4:65650007-65650515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 122
               

               
Conread position:
               
50-549
               

               
Cow position:
               
chr4:44782500-44781977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 112
               

               
Conread position:
               
51-313
               

               
Cow position:
               
chr4:61313088-61313354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 204
               

               
Conread position:
               
51-337
               

               
Cow position:
               
chr4:11871793-11872078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 154
               

               
Conread position:
               
51-337
               

               
Cow position:
               
chr4:45644195-45644478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
157, 7
               

               
Conread position:
               
51-389
               

               
Cow position:
               
chr4:22725214-22724884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
133, 5
               

               
Conread position:
               
51-494
               

               
Cow position:
               
chr4:47510509-47510056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
153, 83
               

               
Conread position:
               
52-179
               

               
Cow position:
               
chr4:23799641-23799770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
52-210
               

               
Cow position:
               
chr4:51193092-51192932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
52-226
               

               
Cow position:
               
chr4:27699155-27698981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
87, 124
               

               
Conread position:
               
52-251
               

               
Cow position:
               
chr4:61757785-61757596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 67
               

               
Conread position:
               
52-293
               

               
Cow position:
               
chr4:16814506-16814263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 145
               

               
Conread position:
               
52-312
               

               
Cow position:
               
chr4:33091497-33091234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
87, 166
               

               
Conread position:
               
52-336
               

               
Cow position:
               
chr4:11271969-11272262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 252
               

               
Conread position:
               
52-337
               

               
Cow position:
               
chr4:806180-805887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
158, 66
               

               
Conread position:
               
52-337
               

               
Cow position:
               
chr4:50203877-50203581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 65
               

               
Conread position:
               
52-342
               

               
Cow position:
               
chr4:59372161-59372447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
87, 154
               

               
Conread position:
               
52-421
               

               
Cow position:
               
chr4:37502937-37502549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
23, 100
               

               
Conread position:
               
52-424
               

               
Cow position:
               
chr4:46455945-46456321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 98
               

               
Conread position:
               
52-501
               

               
Cow position:
               
chr4:19265697-19265222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 118
               

               
Conread position:
               
52-531
               

               
Cow position:
               
chr4:34171458-34171950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 153
               

               
Conread position:
               
52-544
               

               
Cow position:
               
chr4:25879514-25879004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 88
               

               
Conread position:
               
52-544
               

               
Cow position:
               
chr4:44838771-44839277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr4:22236358-22236880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 50
               

               
Conread position:
               
52-555
               

               
Cow position:
               
chr4:23526817-23526286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 55
               

               
Conread position:
               
53-203
               

               
Cow position:
               
chr4:15462128-15462281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
53-544
               

               
Cow position:
               
chr4:42481304-42480792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 46
               

               
Conread position:
               
54-185
               

               
Cow position:
               
chr4:45261926-45262058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
54-187
               

               
Cow position:
               
chr4:67788383-67788248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
54-238
               

               
Cow position:
               
chr4:35834364-35834550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 107
               

               
Conread position:
               
54-509
               

               
Cow position:
               
chr4:1495287-1495760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 65
               

               
Conread position:
               
55-418
               

               
Cow position:
               
chr4:47348945-47348564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
151, 15
               

               
Conread position:
               
56-182
               

               
Cow position:
               
chr4:19561909-19561781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
57-336
               

               
Cow position:
               
chr4:37344309-37344598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
82, 239
               

               
Conread position:
               
58-164
               

               
Cow position:
               
chr4:33870192-33870085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
58-201
               

               
Cow position:
               
chr4:46702540-46702684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
58-202
               

               
Cow position:
               
chr4:61346134-61345992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
58-301
               

               
Cow position:
               
chr4:15134081-15134348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
58-316
               

               
Cow position:
               
chr4:19407880-19408149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
83, 66
               

               
Conread position:
               
58-332
               

               
Cow position:
               
chr4:1354495-1354783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
74, 123
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr4:16762608-16762897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 224
               

               
Conread position:
               
58-438
               

               
Cow position:
               
chr4:21874920-21874538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 143
               

               
Conread position:
               
58-464
               

               
Cow position:
               
chr4:54804303-54804725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
88, 31
               

               
Conread position:
               
58-530
               

               
Cow position:
               
chr4:10056322-10055831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 80
               

               
Conread position:
               
59-340
               

               
Cow position:
               
chr4:69543299-69543005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
59-430
               

               
Cow position:
               
chr4:396048-395669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 29
               

               
Conread position:
               
59-530
               

               
Cow position:
               
chr4:41602969-41602496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 247
               

               
Conread position:
               
60-466
               

               
Cow position:
               
chr4:45738359-45738795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 364
               

               
Conread position:
               
61-337
               

               
Cow position:
               
chr4:65175030-65175309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
79, 199
               

               
Conread position:
               
61-543
               

               
Cow position:
               
chr4:43865742-43866240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 111
               

               
Conread position:
               
62-203
               

               
Cow position:
               
chr4:1645979-1646120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 27
               

               
Conread position:
               
62-294
               

               
Cow position:
               
chr4:45563860-45563615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
50, 140
               

               
Conread position:
               
62-332
               

               
Cow position:
               
chr4:39617079-39616823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 49
               

               
Conread position:
               
62-346
               

               
Cow position:
               
chr4:50769651-50769947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
62-544
               

               
Cow position:
               
chr4:27997802-27997289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
65-473
               

               
Cow position:
               
chr4:37935173-37935604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 228
               

               
Conread position:
               
66-423
               

               
Cow position:
               
chr4:41185810-41186175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
138, 73
               

               
Conread position:
               
66-538
               

               
Cow position:
               
chr4:12561151-12560639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 233
               

               
Conread position:
               
69-398
               

               
Cow position:
               
chr4:55395868-55395520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
72, 54
               

               
Conread position:
               
70-334
               

               
Cow position:
               
chr4:3850657-3850389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
75, 213
               

               
Conread position:
               
70-336
               

               
Cow position:
               
chr4:34369344-34369622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 218
               

               
Conread position:
               
70-346
               

               
Cow position:
               
chr4:63459117-63459391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
70-545
               

               
Cow position:
               
chr4:45589495-45589982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 75
               

               
Conread position:
               
71-425
               

               
Cow position:
               
chr4:5460757-5461128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
71-544
               

               
Cow position:
               
chr4:21017-20532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 219
               

               
Conread position:
               
73-287
               

               
Cow position:
               
chr4:51730054-51729834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
9, 200
               

               
Conread position:
               
73-345
               

               
Cow position:
               
chr4:58858066-58858341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 79
               

               
Conread position:
               
81-555
               

               
Cow position:
               
chr4:14470477-14470973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 29
               

               
Conread position:
               
82-337
               

               
Cow position:
               
chr4:19314107-19313838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
82-339
               

               
Cow position:
               
chr4:12049339-12049073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
82-538
               

               
Cow position:
               
chr4:64040209-64039724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 348
               

               
Conread position:
               
84-346
               

               
Cow position:
               
chr4:5798056-5797794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
59, 12
               

               
Conread position:
               
84-422
               

               
Cow position:
               
chr4:33395606-33395960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
56, 166
               

               
Conread position:
               
88-468
               

               
Cow position:
               
chr4:22741328-22741710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
34, 69
               

               
Conread position:
               
91-518
               

               
Cow position:
               
chr4:65432235-65431805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
49, 197
               

               
Conread position:
               
93-424
               

               
Cow position:
               
chr4:11021568-11021925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
47, 214
               

               
Conread position:
               
93-544
               

               
Cow position:
               
chr4:17474522-17474028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 215
               

               
Conread position:
               
96-544
               

               
Cow position:
               
chr4:16601983-16602449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 57
               

               
Conread position:
               
97-344
               

               
Cow position:
               
chr4:45711441-45711192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
43, 10
               

               
Conread position:
               
97-397
               

               
Cow position:
               
chr4:21232795-21233118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
46, 206
               

               
Conread position:
               
98-238
               

               
Cow position:
               
chr4:21173923-21173779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
103-544
               

               
Cow position:
               
chr4:23854253-23853811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 97
               

               
Conread position:
               
105-449
               

               
Cow position:
               
chr4:2894102-2893726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
35, 362
               

               
Conread position:
               
111-346
               

               
Cow position:
               
chr4:25359663-25359430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
29, 95
               

               
Conread position:
               
112-424
               

               
Cow position:
               
chr4:54930358-54930690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
28, 37
               

               
Conread position:
               
112-510
               

               
Cow position:
               
chr4:10023525-10023111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
28, 138
               

               
Conread position:
               
112-544
               

               
Cow position:
               
chr4:14920053-14919621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 43
               

               
Conread position:
               
114-336
               

               
Cow position:
               
chr4:33612297-33612528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
27, 189
               

               
Conread position:
               
114-337
               

               
Cow position:
               
chr4:28543552-28543771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
114-399
               

               
Cow position:
               
chr4:42921798-42922095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
97, 31
               

               
Conread position:
               
114-425
               

               
Cow position:
               
chr4:5999133-5999469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
94, 27
               

               
Conread position:
               
114-544
               

               
Cow position:
               
chr4:68362983-68362546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 27
               

               
Conread position:
               
116-425
               

               
Cow position:
               
chr4:21371451-21371125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
24, 180
               

               
Conread position:
               
120-544
               

               
Cow position:
               
chr4:39231465-39231916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 129
               

               
Conread position:
               
123-426
               

               
Cow position:
               
chr4:29237117-29237426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
126-548
               

               
Cow position:
               
chr4:33421316-33421745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
14, 61
               

               
Conread position:
               
130-525
               

               
Cow position:
               
chr4:11671498-11671079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 170
               

               
Conread position:
               
130-538
               

               
Cow position:
               
chr4:37619843-37620275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 162
               

               
Conread position:
               
134-337
               

               
Cow position:
               
chr4:23069891-23070107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
138-334
               

               
Cow position:
               
chr4:35939970-35940175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
142-267
               

               
Cow position:
               
chr4:2537225-2537092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
142-337
               

               
Cow position:
               
chr4:19423413-19423218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
94, 63
               

               
Conread position:
               
143-346
               

               
Cow position:
               
chr4:21516971-21517184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
60, 153
               

               
Conread position:
               
143-544
               

               
Cow position:
               
chr4:11201852-11201426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 190
               

               
Conread position:
               
143-544
               

               
Cow position:
               
chr4:53209269-53208845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 271
               

               
Conread position:
               
145-438
               

               
Cow position:
               
chr4:20502668-20502364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
68, 28
               

               
Conread position:
               
145-544
               

               
Cow position:
               
chr4:27291933-27292354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 8
               

               
Conread position:
               
149-337
               

               
Cow position:
               
chr4:46720141-46720334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
151-394
               

               
Cow position:
               
chr4:52497574-52497819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
153-426
               

               
Cow position:
               
chr4:8801530-8801227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
58, 155
               

               
Conread position:
               
154-337
               

               
Cow position:
               
chr4:43749792-43749978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
154-342
               

               
Cow position:
               
chr4:54851097-54851295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
158-337
               

               
Cow position:
               
chr4:5984027-5984211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
159-389
               

               
Cow position:
               
chr4:46501360-46501114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
160-345
               

               
Cow position:
               
chr4:33869670-33869482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 85
               

               
Conread position:
               
160-393
               

               
Cow position:
               
chr4:65538402-65538651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
50, 144
               

               
Conread position:
               
160-555
               

               
Cow position:
               
chr4:30690730-30690333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 83
               

               
Conread position:
               
161-337
               

               
Cow position:
               
chr4:27687941-27687753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
44, 138
               

               
Conread position:
               
161-516
               

               
Cow position:
               
chr4:479994-480373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 138
               

               
Conread position:
               
161-531
               

               
Cow position:
               
chr4:11901547-11901941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 300
               

               
Conread position:
               
163-314
               

               
Cow position:
               
chr4:68855657-68855504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 5
               

               
Conread position:
               
165-336
               

               
Cow position:
               
chr4:34924680-34924858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
45, 118
               

               
Conread position:
               
166-500
               

               
Cow position:
               
chr4:48137921-48137564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
42, 131
               

               
Conread position:
               
166-544
               

               
Cow position:
               
chr4:16637595-16637980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
47, 243
               

               
Conread position:
               
168-544
               

               
Cow position:
               
chr4:46275185-46274799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 55
               

               
Conread position:
               
174-346
               

               
Cow position:
               
chr4:53999509-53999686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
181-335
               

               
Cow position:
               
chr4:568895-568731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 154
               

               
Conread position:
               
191-544
               

               
Cow position:
               
chr4:11090721-11091074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 49
               

               
Conread position:
               
202-335
               

               
Cow position:
               
chr4:46370784-46370646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 96
               

               
Conread position:
               
207-346
               

               
Cow position:
               
chr4:36725000-36724859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
29, 89
               

               
Conread position:
               
207-527
               

               
Cow position:
               
chr4:19558681-19558350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 173
               

               
Conread position:
               
207-544
               

               
Cow position:
               
chr4:14159164-14159519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
22, 65
               

               
Conread position:
               
208-336
               

               
Cow position:
               
chr4:3462087-3462214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
209-444
               

               
Cow position:
               
chr4:27511223-27510977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 101
               

               
Conread position:
               
209-518
               

               
Cow position:
               
chr4:29813586-29813901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 6
               

               
Conread position:
               
210-538
               

               
Cow position:
               
chr4:43369893-43370237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 331
               

               
Conread position:
               
212-345
               

               
Cow position:
               
chr4:59008414-59008548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
41, 84
               

               
Conread position:
               
219-511
               

               
Cow position:
               
chr4:42232608-42232308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
231-530
               

               
Cow position:
               
chr4:61999530-61999832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
17, 97
               
Show alignments to all cow chromosomes.