Cow genome map
| Conread name: | Pig1-114E04 |
| Conread position: | 1-148 |
| Cow position: | chr16:3918373-3918517 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 73 |
| Conread position: | 1-205 |
| Cow position: | chr16:56905698-56905493 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 45, 74 |
| Conread position: | 1-256 |
| Cow position: | chr16:15320623-15320365 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 40, 71 |
| Conread position: | 1-256 |
| Cow position: | chr16:28267171-28266912 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 9, 72 |
| Conread position: | 1-262 |
| Cow position: | chr16:21095642-21095382 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 1-263 |
| Cow position: | chr16:9845868-9845617 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 75 |
| Conread position: | 1-265 |
| Cow position: | chr16:28112080-28111814 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 71 |
| Conread position: | 2-140 |
| Cow position: | chr16:27005046-27005180 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 39, 69 |
| Conread position: | 3-222 |
| Cow position: | chr16:8704124-8704349 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 69 |
| Conread position: | 4-257 |
| Cow position: | chr16:4499281-4499548 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 40, 69 |
| Conread position: | 6-266 |
| Cow position: | chr16:40732066-40732331 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 67 |
| Conread position: | 7-257 |
| Cow position: | chr16:228636-228376 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 51 |
| Conread position: | 8-121 |
| Cow position: | chr16:25803549-25803443 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 62 |
| Conread position: | 8-141 |
| Cow position: | chr16:25463623-25463753 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 65 |
| Conread position: | 8-144 |
| Cow position: | chr16:4875844-4875975 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 8-159 |
| Cow position: | chr16:32384970-32384823 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 138, 60 |
| Conread position: | 8-236 |
| Cow position: | chr16:12738183-12738414 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 38, 114 |
| Conread position: | 8-253 |
| Cow position: | chr16:23990633-23990396 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 72 |
| Conread position: | 8-256 |
| Cow position: | chr16:19976821-19977082 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 76, 90 |
| Conread position: | 8-256 |
| Cow position: | chr16:20260342-20260592 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 35, 64 |
| Conread position: | 8-256 |
| Cow position: | chr16:44898879-44898637 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 35, 62 |
| Conread position: | 8-256 |
| Cow position: | chr16:52565309-52565537 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 8-259 |
| Cow position: | chr16:12169841-12169583 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 38, 65 |
| Conread position: | 8-263 |
| Cow position: | chr16:49579933-49580197 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 58, 39 |
| Conread position: | 8-265 |
| Cow position: | chr16:50014378-50014648 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 42, 65 |
| Conread position: | 8-270 |
| Cow position: | chr16:52222478-52222197 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 38, 65 |
| Conread position: | 8-273 |
| Cow position: | chr16:6998194-6998453 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 33, 65 |
| Conread position: | 8-276 |
| Cow position: | chr16:20685590-20685322 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 38, 65 |
| Conread position: | 9-263 |
| Cow position: | chr16:18949452-18949719 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 64 |
| Conread position: | 10-139 |
| Cow position: | chr16:51994857-51994979 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 14-122 |
| Cow position: | chr16:18051950-18052056 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 81 |
| Conread position: | 14-265 |
| Cow position: | chr16:12612827-12612592 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 110, 32 |
| Conread position: | 14-273 |
| Cow position: | chr16:51880130-51879868 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 59 |
| Conread position: | 18-264 |
| Cow position: | chr16:52218941-52219197 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 29, 55 |
| Conread position: | 23-272 |
| Cow position: | chr16:52683263-52683519 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 30-266 |
| Cow position: | chr16:9765514-9765269 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 16, 54 |
| Conread position: | 43-257 |
| Cow position: | chr16:2619081-2618868 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 35, 55 |
| Conread position: | 47-266 |
| Cow position: | chr16:6375523-6375741 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 77, 25 |
| Conread position: | 75-271 |
| Cow position: | chr16:18237720-18237927 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 49, 22 |
| Conread position: | 133-264 |
| Cow position: | chr16:11218915-11219044 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 144-256 |
| Cow position: | chr16:16546078-16546191 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 145-264 |
| Cow position: | chr16:54321173-54321293 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 145-265 |
| Cow position: | chr16:46204886-46205007 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 145-286 |
| Cow position: | chr16:28814264-28814124 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 145-552 |
| Cow position: | chr16:2308691-2309100 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 19 |
| Conread position: | 164-271 |
| Cow position: | chr16:21816354-21816461 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 20, 81 |
Show alignments to all cow chromosomes.