Cow genome map
| Conread name: | Pig1-114E04 |
| Conread position: | 1-196 |
| Cow position: | chr17:38276571-38276776 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 70 |
| Conread position: | 1-240 |
| Cow position: | chr17:19756014-19755772 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 1-249 |
| Cow position: | chr17:11837306-11837554 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 2-123 |
| Cow position: | chr17:21419319-21419438 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 41, 71 |
| Conread position: | 2-143 |
| Cow position: | chr17:18494633-18494495 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 74 |
| Conread position: | 4-262 |
| Cow position: | chr17:17452716-17452460 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 65 |
| Conread position: | 6-122 |
| Cow position: | chr17:25755677-25755793 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 39, 91 |
| Conread position: | 8-131 |
| Cow position: | chr17:37342591-37342474 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 8-141 |
| Cow position: | chr17:25707850-25707975 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 8-151 |
| Cow position: | chr17:28359736-28359865 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 62 |
| Conread position: | 8-176 |
| Cow position: | chr17:7861950-7861787 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 8-217 |
| Cow position: | chr17:18824681-18824906 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 74 |
| Conread position: | 8-251 |
| Cow position: | chr17:12768889-12768654 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 35, 59 |
| Conread position: | 8-254 |
| Cow position: | chr17:37415005-37414744 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 8-256 |
| Cow position: | chr17:7595052-7595308 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 201 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 40, 14 |
| Conread position: | 8-256 |
| Cow position: | chr17:10423974-10424215 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 38 |
| Conread position: | 8-263 |
| Cow position: | chr17:10308138-10307868 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 35, 66 |
| Conread position: | 8-263 |
| Cow position: | chr17:25740843-25741111 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 8-263 |
| Cow position: | chr17:35990988-35991247 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 204 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 39, 65 |
| Conread position: | 8-264 |
| Cow position: | chr17:1094625-1094360 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 38, 63 |
| Conread position: | 8-273 |
| Cow position: | chr17:10790207-10790472 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 34, 65 |
| Conread position: | 8-276 |
| Cow position: | chr17:20344512-20344768 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 8-279 |
| Cow position: | chr17:20815267-20815522 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 38, 48 |
| Conread position: | 8-311 |
| Cow position: | chr17:25340263-25339945 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 224 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 38, 80 |
| Conread position: | 9-256 |
| Cow position: | chr17:30236114-30236351 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 122, 8 |
| Conread position: | 10-254 |
| Cow position: | chr17:18245970-18246213 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 35, 61 |
| Conread position: | 10-256 |
| Cow position: | chr17:18173912-18173673 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 81 |
| Conread position: | 10-266 |
| Cow position: | chr17:26084927-26085190 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 56 |
| Conread position: | 13-272 |
| Cow position: | chr17:21260054-21259780 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 35, 210 |
| Conread position: | 14-252 |
| Cow position: | chr17:40854766-40855005 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 61 |
| Conread position: | 14-264 |
| Cow position: | chr17:13672173-13671918 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 27, 51 |
| Conread position: | 18-256 |
| Cow position: | chr17:15634976-15634727 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 27, 82 |
| Conread position: | 30-256 |
| Cow position: | chr17:9060220-9059991 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 106 |
| Conread position: | 40-256 |
| Cow position: | chr17:33930106-33930317 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 115, 40 |
| Conread position: | 46-276 |
| Cow position: | chr17:24339113-24339345 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 79, 26 |
| Conread position: | 48-277 |
| Cow position: | chr17:9778597-9778822 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 67, 24 |
| Conread position: | 70-269 |
| Cow position: | chr17:8890255-8890461 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 91-272 |
| Cow position: | chr17:7653592-7653776 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 142 |
| Conread position: | 104-264 |
| Cow position: | chr17:19881111-19881275 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 24, 73 |
| Conread position: | 138-256 |
| Cow position: | chr17:32457530-32457411 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 139-278 |
| Cow position: | chr17:3185224-3185359 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 144-271 |
| Cow position: | chr17:14922156-14922284 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 145-261 |
| Cow position: | chr17:10330254-10330138 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 72, 33 |
| Conread position: | 145-273 |
| Cow position: | chr17:33970434-33970569 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 145-276 |
| Cow position: | chr17:8842057-8841926 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 38, 121 |
| Conread position: | 147-267 |
| Cow position: | chr17:10792049-10791928 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 93, 51 |
| Conread position: | 150-261 |
| Cow position: | chr17:39291814-39291704 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
Show alignments to all cow chromosomes.