Cow genome map
| Conread name: | Pig1-114E04 |
| Conread position: | 1-230 |
| Cow position: | chr18:31562583-31562349 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 130, 38 |
| Conread position: | 1-253 |
| Cow position: | chr18:21574801-21575068 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 83 |
| Conread position: | 1-273 |
| Cow position: | chr18:17324523-17324800 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 9, 75 |
| Conread position: | 4-263 |
| Cow position: | chr18:17334602-17334329 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 93 |
| Conread position: | 8-242 |
| Cow position: | chr18:4578647-4578416 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 114, 38 |
| Conread position: | 8-256 |
| Cow position: | chr18:51412191-51412429 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 8-263 |
| Cow position: | chr18:5570974-5571206 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 33, 64 |
| Conread position: | 8-263 |
| Cow position: | chr18:41072823-41073076 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 63 |
| Conread position: | 8-265 |
| Cow position: | chr18:36649790-36650037 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 8-270 |
| Cow position: | chr18:35767010-35767269 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 30, 40 |
| Conread position: | 10-251 |
| Cow position: | chr18:3780261-3780512 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 30, 77 |
| Conread position: | 11-123 |
| Cow position: | chr18:43463589-43463480 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 30, 60 |
| Conread position: | 12-141 |
| Cow position: | chr18:23487847-23487972 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 58 |
| Conread position: | 16-274 |
| Cow position: | chr18:21930514-21930252 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 30, 84 |
| Conread position: | 18-276 |
| Cow position: | chr18:23360460-23360736 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 28, 56 |
| Conread position: | 28-273 |
| Cow position: | chr18:37745642-37745901 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 17, 49 |
| Conread position: | 29-256 |
| Cow position: | chr18:24364208-24363975 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 39-265 |
| Cow position: | chr18:13497491-13497279 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 103, 31 |
| Conread position: | 47-259 |
| Cow position: | chr18:43970222-43970436 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 16, 49 |
| Conread position: | 56-236 |
| Cow position: | chr18:49227893-49228070 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 69, 16 |
| Conread position: | 80-265 |
| Cow position: | chr18:43637622-43637801 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 138-262 |
| Cow position: | chr18:19850759-19850635 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 138-266 |
| Cow position: | chr18:7456097-7456222 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 144-262 |
| Cow position: | chr18:32517381-32517262 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 145-273 |
| Cow position: | chr18:47186937-47187064 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 62, 74 |
| Conread position: | 145-281 |
| Cow position: | chr18:6741222-6741356 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 146-259 |
| Cow position: | chr18:1190749-1190634 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 147-256 |
| Cow position: | chr18:30566584-30566475 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 151-261 |
| Cow position: | chr18:5623323-5623432 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 152-272 |
| Cow position: | chr18:39455026-39454907 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
Show alignments to all cow chromosomes.