Cow genome map
| Conread name: | Pig1-114E04 |
| Conread position: | 1-122 |
| Cow position: | chr2:66797048-66796926 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 40, 73 |
| Conread position: | 1-151 |
| Cow position: | chr2:39855631-39855774 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 40, 70 |
| Conread position: | 1-188 |
| Cow position: | chr2:39533940-39534126 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 69 |
| Conread position: | 1-256 |
| Cow position: | chr2:7498428-7498693 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 45, 12 |
| Conread position: | 1-256 |
| Cow position: | chr2:49480748-49480476 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-265 |
| Cow position: | chr2:40836317-40836052 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 9, 79 |
| Conread position: | 1-265 |
| Cow position: | chr2:54306519-54306785 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 1-274 |
| Cow position: | chr2:52777128-52777410 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 2-256 |
| Cow position: | chr2:70306007-70306261 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 126, 43 |
| Conread position: | 4-267 |
| Cow position: | chr2:40492218-40492486 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 37, 69 |
| Conread position: | 5-256 |
| Cow position: | chr2:21183013-21183263 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 41, 6 |
| Conread position: | 5-264 |
| Cow position: | chr2:34493656-34493899 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 119, 41 |
| Conread position: | 8-122 |
| Cow position: | chr2:19154155-19154268 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 90 |
| Conread position: | 8-140 |
| Cow position: | chr2:43773726-43773598 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 8-190 |
| Cow position: | chr2:73069573-73069750 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 39, 89 |
| Conread position: | 8-227 |
| Cow position: | chr2:15769638-15769417 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 122, 40 |
| Conread position: | 8-250 |
| Cow position: | chr2:18889534-18889313 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 62 |
| Conread position: | 8-251 |
| Cow position: | chr2:36998011-36998249 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 168, 38 |
| Conread position: | 8-254 |
| Cow position: | chr2:58685229-58685498 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 88 |
| Conread position: | 8-256 |
| Cow position: | chr2:27613171-27612913 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 8-256 |
| Cow position: | chr2:50400275-50400533 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 38, 66 |
| Conread position: | 8-259 |
| Cow position: | chr2:70752647-70752916 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 8-262 |
| Cow position: | chr2:69046888-69047143 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 37, 65 |
| Conread position: | 8-264 |
| Cow position: | chr2:17346918-17347176 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 8-264 |
| Cow position: | chr2:56042499-56042238 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 115, 36 |
| Conread position: | 8-264 |
| Cow position: | chr2:70790899-70790627 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 38, 66 |
| Conread position: | 8-265 |
| Cow position: | chr2:57293423-57293153 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 33, 62 |
| Conread position: | 8-276 |
| Cow position: | chr2:39499683-39499944 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 33, 64 |
| Conread position: | 8-276 |
| Cow position: | chr2:50606397-50606676 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 38, 43 |
| Conread position: | 8-276 |
| Cow position: | chr2:76822399-76822119 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 37, 63 |
| Conread position: | 8-278 |
| Cow position: | chr2:29288885-29289164 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 215 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 41, 66 |
| Conread position: | 9-122 |
| Cow position: | chr2:2382707-2382598 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 10-135 |
| Cow position: | chr2:72688143-72688023 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 10-230 |
| Cow position: | chr2:61950376-61950605 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 36, 64 |
| Conread position: | 10-271 |
| Cow position: | chr2:66780003-66779733 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 11-265 |
| Cow position: | chr2:4885357-4885107 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 14 |
| Conread position: | 12-264 |
| Cow position: | chr2:40791034-40791295 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 7, 51 |
| Conread position: | 14-140 |
| Cow position: | chr2:80595456-80595335 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 54 |
| Conread position: | 14-144 |
| Cow position: | chr2:17341430-17341560 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 14-256 |
| Cow position: | chr2:67485100-67485364 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 83 |
| Conread position: | 14-265 |
| Cow position: | chr2:40979846-40979608 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 32, 58 |
| Conread position: | 15-242 |
| Cow position: | chr2:70601861-70602104 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 30, 64 |
| Conread position: | 18-255 |
| Cow position: | chr2:61471711-61471945 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 28, 55 |
| Conread position: | 22-276 |
| Cow position: | chr2:70224232-70223965 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 83, 24 |
| Conread position: | 25-256 |
| Cow position: | chr2:64197120-64196876 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 20, 48 |
| Conread position: | 48-273 |
| Cow position: | chr2:62501411-62501199 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 78, 24 |
| Conread position: | 51-240 |
| Cow position: | chr2:11234741-11234566 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 77-273 |
| Cow position: | chr2:27067016-27067207 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 187, 20 |
| Conread position: | 80-272 |
| Cow position: | chr2:68010595-68010792 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 48, 15 |
| Conread position: | 88-267 |
| Cow position: | chr2:12895961-12895775 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 59, 6 |
| Conread position: | 123-256 |
| Cow position: | chr2:45435086-45435215 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 55, 7 |
| Conread position: | 145-259 |
| Cow position: | chr2:32498621-32498510 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 145-261 |
| Cow position: | chr2:39479232-39479119 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 27, 37 |
| Conread position: | 146-256 |
| Cow position: | chr2:77982140-77982029 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 148-256 |
| Cow position: | chr2:39832398-39832506 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 35, 99 |
| Conread position: | 148-263 |
| Cow position: | chr2:55848778-55848893 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 162-266 |
| Cow position: | chr2:66924895-66925000 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
Show alignments to all cow chromosomes.