Cow genome map

Conread name: Pig1-114E04

Conread position: 1-122
Cow position: chr3:22171008-22171123 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 10

Conread position: 1-136
Cow position: chr3:34316142-34316008 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 9, 75

Conread position: 1-145
Cow position: chr3:50347786-50347924 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 70

Conread position: 1-252
Cow position: chr3:58865641-58865384 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 202
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 15, 73

Conread position: 1-254
Cow position: chr3:51255607-51255871 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 39, 70

Conread position: 1-257
Cow position: chr3:20092695-20092431 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 9, 34

Conread position: 1-261
Cow position: chr3:63237927-63237664 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 42, 113

Conread position: 1-263
Cow position: chr3:11949535-11949275 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 9, 71

Conread position: 1-264
Cow position: chr3:82473877-82474142 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 72

Conread position: 1-272
Cow position: chr3:23496738-23496469 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 135, 45

Conread position: 2-256
Cow position: chr3:8923866-8924134 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 8, 46

Conread position: 2-263
Cow position: chr3:58350405-58350672 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 74

Conread position: 2-271
Cow position: chr3:16809966-16809704 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 72

Conread position: 2-272
Cow position: chr3:49428131-49427876 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 43, 67

Conread position: 3-263
Cow position: chr3:46332315-46332061 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 42, 78

Conread position: 4-122
Cow position: chr3:58174727-58174842 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 67

Conread position: 4-131
Cow position: chr3:43657884-43657763 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 4-255
Cow position: chr3:4329165-4329412 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 95, 41

Conread position: 4-256
Cow position: chr3:23476825-23477084 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 7

Conread position: 8-134
Cow position: chr3:62884033-62884153 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 8-134
Cow position: chr3:66116285-66116162 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 63

Conread position: 8-172
Cow position: chr3:53588560-53588393 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 63

Conread position: 8-189
Cow position: chr3:36174243-36174072 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 63

Conread position: 8-254
Cow position: chr3:55992040-55991777 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 18

Conread position: 8-256
Cow position: chr3:22271608-22271361 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 20, 67

Conread position: 8-256
Cow position: chr3:23111674-23111419 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 40

Conread position: 8-256
Cow position: chr3:25090889-25091123 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 44

Conread position: 8-256
Cow position: chr3:51146835-51146578 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 73

Conread position: 8-256
Cow position: chr3:63038962-63039194 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 126, 29

Conread position: 8-259
Cow position: chr3:17742339-17742586 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 198
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 39, 65

Conread position: 8-263
Cow position: chr3:66738604-66738859 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 35, 65

Conread position: 8-263
Cow position: chr3:73777108-73777371 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 203
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 30, 67

Conread position: 8-264
Cow position: chr3:32597101-32596843 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 35, 65

Conread position: 8-264
Cow position: chr3:53538355-53538613 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 33, 48

Conread position: 8-264
Cow position: chr3:83396023-83396283 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 64

Conread position: 8-273
Cow position: chr3:71135619-71135897 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 38, 65

Conread position: 8-275
Cow position: chr3:17284668-17284940 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 89

Conread position: 8-279
Cow position: chr3:33633061-33632792 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 17

Conread position: 8-284
Cow position: chr3:4223144-4223421 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 64

Conread position: 9-122
Cow position: chr3:48433777-48433886 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 62

Conread position: 9-276
Cow position: chr3:61116543-61116295 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 10-256
Cow position: chr3:5420033-5419770 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 80, 63

Conread position: 10-270
Cow position: chr3:8790762-8790493 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 31, 61

Conread position: 12-256
Cow position: chr3:22954021-22953790 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 171, 34

Conread position: 13-265
Cow position: chr3:70129976-70129726 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 108, 33

Conread position: 25-277
Cow position: chr3:74561567-74561309 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 48

Conread position: 26-276
Cow position: chr3:35018999-35018753 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 48

Conread position: 26-277
Cow position: chr3:22781127-22780884 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 238, 20

Conread position: 28-265
Cow position: chr3:3063592-3063827 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 9

Conread position: 35-274
Cow position: chr3:74035667-74035431 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 11, 48

Conread position: 40-247
Cow position: chr3:69446875-69446660 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 18

Conread position: 56-273
Cow position: chr3:20405680-20405895 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 86, 15

Conread position: 77-246
Cow position: chr3:58852066-58852241 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 18

Conread position: 77-269
Cow position: chr3:66145808-66146008 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 56, 18

Conread position: 78-276
Cow position: chr3:66147197-66147381 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 173, 20

Conread position: 98-290
Cow position: chr3:58226954-58226757 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 44, 30

Conread position: 136-273
Cow position: chr3:38306593-38306731 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 115

Conread position: 137-265
Cow position: chr3:45690901-45690775 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 137-271
Cow position: chr3:29095366-29095229 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 9, 109

Conread position: 145-267
Cow position: chr3:42293996-42293877 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 12

Conread position: 146-256
Cow position: chr3:58632545-58632655 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 147-277
Cow position: chr3:84976951-84976821 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 54

Conread position: 148-273
Cow position: chr3:58181045-58180919 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 119, 24

Conread position: 153-263
Cow position: chr3:53633326-53633437 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 155-276
Cow position: chr3:50462484-50462602 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 164-278
Cow position: chr3:20054763-20054878 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 100
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 0

Show alignments to all cow chromosomes.