Cow genome map

Conread name: Pig1-114E04

Conread position: 1-122
Cow position: chr5:20974577-20974459 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 17

Conread position: 1-122
Cow position: chr5:33467174-33467057 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 104
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 40, 70

Conread position: 1-262
Cow position: chr5:40759846-40760105 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 40, 52

Conread position: 1-264
Cow position: chr5:72042093-72042356 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 45, 17

Conread position: 1-269
Cow position: chr5:31786119-31786379 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 45, 17

Conread position: 1-270
Cow position: chr5:69773440-69773703 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 17

Conread position: 1-272
Cow position: chr5:504043-503763 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 213
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 26

Conread position: 1-273
Cow position: chr5:46294797-46294528 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 9, 71

Conread position: 2-135
Cow position: chr5:27615384-27615513 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 44, 68

Conread position: 2-279
Cow position: chr5:18104276-18103979 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 39, 86

Conread position: 8-122
Cow position: chr5:37714022-37713912 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 60

Conread position: 8-140
Cow position: chr5:14154023-14154152 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 63

Conread position: 8-145
Cow position: chr5:39182035-39181903 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 35, 63

Conread position: 8-145
Cow position: chr5:48143911-48143777 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 63

Conread position: 8-146
Cow position: chr5:41636746-41636876 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 33, 63

Conread position: 8-148
Cow position: chr5:22839596-22839464 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 8-148
Cow position: chr5:22934577-22934444 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 78

Conread position: 8-241
Cow position: chr5:55989619-55989869 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 76

Conread position: 8-254
Cow position: chr5:34184099-34184365 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 93

Conread position: 8-256
Cow position: chr5:3649582-3649318 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 40, 63

Conread position: 8-256
Cow position: chr5:4630999-4631245 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 38

Conread position: 8-256
Cow position: chr5:17869582-17869829 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 127

Conread position: 8-256
Cow position: chr5:23641117-23640873 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 95

Conread position: 8-256
Cow position: chr5:50425601-50425344 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 198
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 34, 92

Conread position: 8-256
Cow position: chr5:64398886-64399152 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 87

Conread position: 8-256
Cow position: chr5:73526256-73526510 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 133, 38

Conread position: 8-257
Cow position: chr5:56385105-56385358 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 38, 65

Conread position: 8-263
Cow position: chr5:43110442-43110700 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 117, 36

Conread position: 8-263
Cow position: chr5:72902438-72902697 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 65

Conread position: 8-266
Cow position: chr5:26046210-26046475 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 65

Conread position: 8-266
Cow position: chr5:32282210-32282487 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 38, 66

Conread position: 8-267
Cow position: chr5:19905397-19905128 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 40, 91

Conread position: 8-276
Cow position: chr5:13906743-13907015 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 13, 66

Conread position: 8-276
Cow position: chr5:24361409-24361676 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 206
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 123, 44

Conread position: 8-278
Cow position: chr5:36407034-36407318 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 65

Conread position: 10-232
Cow position: chr5:14538781-14538560 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 176
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 31, 61

Conread position: 18-257
Cow position: chr5:13044508-13044267 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 28, 55

Conread position: 19-254
Cow position: chr5:47681115-47680876 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 117, 27

Conread position: 23-270
Cow position: chr5:51502903-51503163 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 103, 21

Conread position: 29-273
Cow position: chr5:44417457-44417199 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 201
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 17, 49

Conread position: 45-263
Cow position: chr5:17404094-17403897 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 69-270
Cow position: chr5:67555147-67555349 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 28

Conread position: 96-275
Cow position: chr5:23715126-23714931 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 120-256
Cow position: chr5:21195117-21194979 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 126-270
Cow position: chr5:41907041-41907189 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 138-263
Cow position: chr5:65044049-65043923 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 139-266
Cow position: chr5:63819166-63819035 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 9, 115

Conread position: 145-264
Cow position: chr5:36024545-36024426 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 145-265
Cow position: chr5:26376576-26376698 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 145-266
Cow position: chr5:20572081-20572202 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 145-269
Cow position: chr5:75524661-75524786 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 146-256
Cow position: chr5:30332983-30333094 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 146-256
Cow position: chr5:38629319-38629430 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 147-256
Cow position: chr5:67149984-67149874 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 151-257
Cow position: chr5:3058957-3059064 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Show alignments to all cow chromosomes.