Cow genome map
Conread name: | Pig1-114E04 |
Conread position: | 1-122 |
Cow position: | chr5:20974577-20974459 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 45, 17 |
Conread position: | 1-122 |
Cow position: | chr5:33467174-33467057 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 104 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 40, 70 |
Conread position: | 1-262 |
Cow position: | chr5:40759846-40760105 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 193 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 40, 52 |
Conread position: | 1-264 |
Cow position: | chr5:72042093-72042356 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 206 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 45, 17 |
Conread position: | 1-269 |
Cow position: | chr5:31786119-31786379 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 199 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 45, 17 |
Conread position: | 1-270 |
Cow position: | chr5:69773440-69773703 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 202 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 45, 17 |
Conread position: | 1-272 |
Cow position: | chr5:504043-503763 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 213 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 9, 26 |
Conread position: | 1-273 |
Cow position: | chr5:46294797-46294528 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 202 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 9, 71 |
Conread position: | 2-135 |
Cow position: | chr5:27615384-27615513 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 106 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 44, 68 |
Conread position: | 2-279 |
Cow position: | chr5:18104276-18103979 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 220 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 39, 86 |
Conread position: | 8-122 |
Cow position: | chr5:37714022-37713912 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 98 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 33, 60 |
Conread position: | 8-140 |
Cow position: | chr5:14154023-14154152 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 107 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 36, 63 |
Conread position: | 8-145 |
Cow position: | chr5:39182035-39181903 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 112 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 35, 63 |
Conread position: | 8-145 |
Cow position: | chr5:48143911-48143777 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 107 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 38, 63 |
Conread position: | 8-146 |
Cow position: | chr5:41636746-41636876 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 115 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 33, 63 |
Conread position: | 8-148 |
Cow position: | chr5:22839596-22839464 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 111 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 8-148 |
Cow position: | chr5:22934577-22934444 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 114 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 38, 78 |
Conread position: | 8-241 |
Cow position: | chr5:55989619-55989869 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 186 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 38, 76 |
Conread position: | 8-254 |
Cow position: | chr5:34184099-34184365 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 192 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 36, 93 |
Conread position: | 8-256 |
Cow position: | chr5:3649582-3649318 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 195 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 40, 63 |
Conread position: | 8-256 |
Cow position: | chr5:4630999-4631245 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 179 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 115, 38 |
Conread position: | 8-256 |
Cow position: | chr5:17869582-17869829 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 173 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 35, 127 |
Conread position: | 8-256 |
Cow position: | chr5:23641117-23640873 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 181 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 38, 95 |
Conread position: | 8-256 |
Cow position: | chr5:50425601-50425344 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 198 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 34, 92 |
Conread position: | 8-256 |
Cow position: | chr5:64398886-64399152 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 197 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 38, 87 |
Conread position: | 8-256 |
Cow position: | chr5:73526256-73526510 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 186 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 133, 38 |
Conread position: | 8-257 |
Cow position: | chr5:56385105-56385358 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 193 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 38, 65 |
Conread position: | 8-263 |
Cow position: | chr5:43110442-43110700 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 191 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 117, 36 |
Conread position: | 8-263 |
Cow position: | chr5:72902438-72902697 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 185 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 34, 65 |
Conread position: | 8-266 |
Cow position: | chr5:26046210-26046475 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 202 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 38, 65 |
Conread position: | 8-266 |
Cow position: | chr5:32282210-32282487 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 195 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 38, 66 |
Conread position: | 8-267 |
Cow position: | chr5:19905397-19905128 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 198 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 40, 91 |
Conread position: | 8-276 |
Cow position: | chr5:13906743-13907015 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 210 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 13, 66 |
Conread position: | 8-276 |
Cow position: | chr5:24361409-24361676 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 206 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 123, 44 |
Conread position: | 8-278 |
Cow position: | chr5:36407034-36407318 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 65 |
Conread position: | 10-232 |
Cow position: | chr5:14538781-14538560 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 176 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 31, 61 |
Conread position: | 18-257 |
Cow position: | chr5:13044508-13044267 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 173 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 28, 55 |
Conread position: | 19-254 |
Cow position: | chr5:47681115-47680876 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 176 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 117, 27 |
Conread position: | 23-270 |
Cow position: | chr5:51502903-51503163 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 190 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 103, 21 |
Conread position: | 29-273 |
Cow position: | chr5:44417457-44417199 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 201 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 17, 49 |
Conread position: | 45-263 |
Cow position: | chr5:17404094-17403897 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 166 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 69-270 |
Cow position: | chr5:67555147-67555349 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 151 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 62, 28 |
Conread position: | 96-275 |
Cow position: | chr5:23715126-23714931 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 142 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 120-256 |
Cow position: | chr5:21195117-21194979 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 105 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 126-270 |
Cow position: | chr5:41907041-41907189 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 114 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 138-263 |
Cow position: | chr5:65044049-65043923 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 97 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 139-266 |
Cow position: | chr5:63819166-63819035 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 9, 115 |
Conread position: | 145-264 |
Cow position: | chr5:36024545-36024426 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 101 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 145-265 |
Cow position: | chr5:26376576-26376698 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 145-266 |
Cow position: | chr5:20572081-20572202 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 100 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 145-269 |
Cow position: | chr5:75524661-75524786 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 96 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 146-256 |
Cow position: | chr5:30332983-30333094 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 89 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 146-256 |
Cow position: | chr5:38629319-38629430 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 89 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 147-256 |
Cow position: | chr5:67149984-67149874 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 90 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 151-257 |
Cow position: | chr5:3058957-3059064 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 87 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Show alignments to all cow chromosomes.