Cow genome map
| Conread name: | Pig1-114E04 |
| Conread position: | 1-144 |
| Cow position: | chr6:60152919-60153060 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 40, 70 |
| Conread position: | 1-256 |
| Cow position: | chr6:9026398-9026677 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 9, 72 |
| Conread position: | 1-264 |
| Cow position: | chr6:64436444-64436166 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 47, 71 |
| Conread position: | 4-252 |
| Cow position: | chr6:50271208-50270958 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 126, 44 |
| Conread position: | 8-128 |
| Cow position: | chr6:56376462-56376346 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 8-145 |
| Cow position: | chr6:8318274-8318144 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 8-237 |
| Cow position: | chr6:67436878-67437103 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 37, 61 |
| Conread position: | 8-243 |
| Cow position: | chr6:12387434-12387194 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 8-253 |
| Cow position: | chr6:1907434-1907674 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 33, 48 |
| Conread position: | 8-256 |
| Cow position: | chr6:10237255-10237491 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 38, 65 |
| Conread position: | 8-256 |
| Cow position: | chr6:52556584-52556341 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 145, 33 |
| Conread position: | 8-257 |
| Cow position: | chr6:37053890-37054143 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 37, 91 |
| Conread position: | 8-264 |
| Cow position: | chr6:35703299-35703043 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 200 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 38, 65 |
| Conread position: | 8-265 |
| Cow position: | chr6:16634328-16634060 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 208 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 38, 65 |
| Conread position: | 8-270 |
| Cow position: | chr6:59249787-59249528 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 131, 38 |
| Conread position: | 8-274 |
| Cow position: | chr6:32816888-32817155 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 16, 66 |
| Conread position: | 8-276 |
| Cow position: | chr6:4079493-4079220 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 37, 49 |
| Conread position: | 8-278 |
| Cow position: | chr6:62345958-62345706 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 38, 27 |
| Conread position: | 9-233 |
| Cow position: | chr6:47327175-47326938 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 10-278 |
| Cow position: | chr6:37739078-37739353 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 12-255 |
| Cow position: | chr6:22968975-22969215 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 34, 61 |
| Conread position: | 14-266 |
| Cow position: | chr6:20379572-20379311 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 201 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 110, 9 |
| Conread position: | 14-273 |
| Cow position: | chr6:61322504-61322767 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 31, 59 |
| Conread position: | 15-141 |
| Cow position: | chr6:59588513-59588389 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 59 |
| Conread position: | 18-265 |
| Cow position: | chr6:38895182-38894945 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 193 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 33, 56 |
| Conread position: | 19-279 |
| Cow position: | chr6:8986481-8986227 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 27, 53 |
| Conread position: | 28-272 |
| Cow position: | chr6:15025979-15025720 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 11, 45 |
| Conread position: | 43-266 |
| Cow position: | chr6:19424629-19424864 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 81, 30 |
| Conread position: | 43-278 |
| Cow position: | chr6:29480175-29480417 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 227 |
| Conread position: | 60-276 |
| Cow position: | chr6:21319744-21319528 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 86, 12 |
| Conread position: | 76-265 |
| Cow position: | chr6:55643495-55643294 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 50, 22 |
| Conread position: | 138-270 |
| Cow position: | chr6:24557919-24558051 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 117, 47 |
| Conread position: | 145-265 |
| Cow position: | chr6:49333242-49333362 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 146-263 |
| Cow position: | chr6:50317998-50317880 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 146-266 |
| Cow position: | chr6:16781706-16781586 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 161-272 |
| Cow position: | chr6:44832666-44832555 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 167-271 |
| Cow position: | chr6:40104754-40104858 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.