Cow genome map
| Conread name: | Pig1-114E04 |
| Conread position: | 1-122 |
| Cow position: | chr8:31313752-31313865 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 43, 69 |
| Conread position: | 1-147 |
| Cow position: | chr8:39936358-39936504 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 76 |
| Conread position: | 1-149 |
| Cow position: | chr8:29935772-29935915 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 68 |
| Conread position: | 1-237 |
| Cow position: | chr8:47995447-47995213 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 45, 28 |
| Conread position: | 1-264 |
| Cow position: | chr8:24909465-24909723 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 147, 17 |
| Conread position: | 1-272 |
| Cow position: | chr8:42578222-42577949 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 9, 57 |
| Conread position: | 1-273 |
| Cow position: | chr8:24834577-24834848 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 9, 45 |
| Conread position: | 2-153 |
| Cow position: | chr8:52195774-52195925 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 123, 68 |
| Conread position: | 4-254 |
| Cow position: | chr8:21281922-21282183 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 42, 67 |
| Conread position: | 8-121 |
| Cow position: | chr8:35436754-35436645 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 58 |
| Conread position: | 8-128 |
| Cow position: | chr8:13738359-13738476 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 74 |
| Conread position: | 8-144 |
| Cow position: | chr8:4161166-4161035 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 33, 64 |
| Conread position: | 8-149 |
| Cow position: | chr8:29028220-29028086 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 8-230 |
| Cow position: | chr8:43904646-43904872 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 32, 63 |
| Conread position: | 8-231 |
| Cow position: | chr8:29416470-29416268 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 131, 38 |
| Conread position: | 8-252 |
| Cow position: | chr8:25572913-25573163 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 8-254 |
| Cow position: | chr8:13975758-13976016 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 36, 100 |
| Conread position: | 8-256 |
| Cow position: | chr8:24934013-24934245 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 38, 65 |
| Conread position: | 8-256 |
| Cow position: | chr8:28221703-28221438 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 8-256 |
| Cow position: | chr8:36505229-36505503 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 73 |
| Conread position: | 8-256 |
| Cow position: | chr8:47295841-47296098 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 201 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 8-256 |
| Cow position: | chr8:53865969-53866229 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 38, 63 |
| Conread position: | 8-257 |
| Cow position: | chr8:11896082-11896333 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 8-264 |
| Cow position: | chr8:31317405-31317648 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 66 |
| Conread position: | 8-264 |
| Cow position: | chr8:32491416-32491665 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 38, 65 |
| Conread position: | 8-265 |
| Cow position: | chr8:20131689-20131955 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 38, 66 |
| Conread position: | 8-265 |
| Cow position: | chr8:49300734-49300466 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 38, 66 |
| Conread position: | 8-265 |
| Cow position: | chr8:61123439-61123185 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 123, 62 |
| Conread position: | 8-270 |
| Cow position: | chr8:8902103-8901843 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 63 |
| Conread position: | 8-272 |
| Cow position: | chr8:36364189-36363919 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 117, 38 |
| Conread position: | 8-273 |
| Cow position: | chr8:3147683-3147395 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 33, 6 |
| Conread position: | 10-243 |
| Cow position: | chr8:18220862-18220624 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 36, 63 |
| Conread position: | 10-276 |
| Cow position: | chr8:58385530-58385805 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 34, 66 |
| Conread position: | 12-146 |
| Cow position: | chr8:44664713-44664583 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 59 |
| Conread position: | 14-256 |
| Cow position: | chr8:35218234-35218494 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 5 |
| Conread position: | 14-264 |
| Cow position: | chr8:11637996-11638251 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 30, 66 |
| Conread position: | 18-141 |
| Cow position: | chr8:30135788-30135907 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 28, 54 |
| Conread position: | 41-273 |
| Cow position: | chr8:55211070-55211305 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 103, 31 |
| Conread position: | 44-273 |
| Cow position: | chr8:53991992-53992218 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 95, 18 |
| Conread position: | 48-256 |
| Cow position: | chr8:11249575-11249352 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 76, 24 |
| Conread position: | 96-276 |
| Cow position: | chr8:57236710-57236902 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 144-262 |
| Cow position: | chr8:6830789-6830672 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 145-263 |
| Cow position: | chr8:6021504-6021385 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 145-263 |
| Cow position: | chr8:29390944-29391062 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 146-256 |
| Cow position: | chr8:46640319-46640209 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 32, 89 |
Show alignments to all cow chromosomes.