Cow genome map
| Conread name: | Pig1-114E04 |
| Conread position: | 1-296 |
| Cow position: | chr9:8740701-8740408 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 2-245 |
| Cow position: | chr9:58204844-58204595 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 100, 64 |
| Conread position: | 2-264 |
| Cow position: | chr9:5071421-5071697 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 2-276 |
| Cow position: | chr9:46242079-46242365 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 220 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 39, 94 |
| Conread position: | 4-271 |
| Cow position: | chr9:21462667-21462971 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 106 |
| Conread position: | 8-131 |
| Cow position: | chr9:44108652-44108769 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 24 |
| Conread position: | 8-140 |
| Cow position: | chr9:52787358-52787486 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 39, 63 |
| Conread position: | 8-148 |
| Cow position: | chr9:56253076-56252941 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 8-151 |
| Cow position: | chr9:32816955-32817094 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 90 |
| Conread position: | 8-216 |
| Cow position: | chr9:33880546-33880338 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 33, 61 |
| Conread position: | 8-236 |
| Cow position: | chr9:214289-214529 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 8-236 |
| Cow position: | chr9:44552926-44552678 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 81, 90 |
| Conread position: | 8-238 |
| Cow position: | chr9:52633316-52633561 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 37, 63 |
| Conread position: | 8-247 |
| Cow position: | chr9:58669556-58669302 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 38, 64 |
| Conread position: | 8-256 |
| Cow position: | chr9:11102636-11102888 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 38, 27 |
| Conread position: | 8-256 |
| Cow position: | chr9:18093484-18093731 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 38, 69 |
| Conread position: | 8-256 |
| Cow position: | chr9:34310209-34309940 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 33, 90 |
| Conread position: | 8-256 |
| Cow position: | chr9:42173013-42173274 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 33, 71 |
| Conread position: | 8-256 |
| Cow position: | chr9:48773522-48773261 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 39, 65 |
| Conread position: | 8-260 |
| Cow position: | chr9:35368819-35368552 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 38, 93 |
| Conread position: | 8-263 |
| Cow position: | chr9:8914441-8914187 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 8-263 |
| Cow position: | chr9:44217939-44217679 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 37, 65 |
| Conread position: | 8-272 |
| Cow position: | chr9:23443738-23443485 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 39, 65 |
| Conread position: | 8-272 |
| Cow position: | chr9:23450689-23450436 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 39, 65 |
| Conread position: | 8-272 |
| Cow position: | chr9:31886236-31886485 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 37, 87 |
| Conread position: | 8-273 |
| Cow position: | chr9:3594351-3594622 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 47, 65 |
| Conread position: | 8-276 |
| Cow position: | chr9:46227051-46226779 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 38, 66 |
| Conread position: | 10-122 |
| Cow position: | chr9:18110688-18110797 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 34, 61 |
| Conread position: | 12-276 |
| Cow position: | chr9:11146484-11146746 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 25 |
| Conread position: | 16-274 |
| Cow position: | chr9:54446263-54446517 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 113, 49 |
| Conread position: | 20-272 |
| Cow position: | chr9:16982810-16983037 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 29-256 |
| Cow position: | chr9:30020125-30019893 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 17, 42 |
| Conread position: | 35-272 |
| Cow position: | chr9:7843799-7843551 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 44, 226 |
| Conread position: | 40-256 |
| Cow position: | chr9:24837675-24837449 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 85, 32 |
| Conread position: | 52-256 |
| Cow position: | chr9:15034043-15033820 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 153 |
| Conread position: | 56-253 |
| Cow position: | chr9:33059151-33059357 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 144-273 |
| Cow position: | chr9:11155582-11155453 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 145-278 |
| Cow position: | chr9:64104964-64104830 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 122, 36 |
| Conread position: | 146-273 |
| Cow position: | chr9:21956746-21956619 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 37, 104 |
Show alignments to all cow chromosomes.