Cow genome map
| Conread name: | Pig1-117N15 |
| Conread position: | 34-477 |
| Cow position: | chr1:31190080-31190521 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 232 |
| Conread position: | 35-193 |
| Cow position: | chr1:44746889-44746733 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 105, 33 |
| Conread position: | 35-212 |
| Cow position: | chr1:40388840-40389010 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 106, 63 |
| Conread position: | 35-257 |
| Cow position: | chr1:58825570-58825348 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 45, 90 |
| Conread position: | 35-284 |
| Cow position: | chr1:22777518-22777778 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 35-312 |
| Cow position: | chr1:2765439-2765165 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 102, 208 |
| Conread position: | 35-422 |
| Cow position: | chr1:91816746-91817143 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 59 |
| Conread position: | 35-477 |
| Cow position: | chr1:28678548-28678090 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 324 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 47, 88 |
| Conread position: | 36-472 |
| Cow position: | chr1:29916436-29916000 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 205 |
| Conread position: | 36-475 |
| Cow position: | chr1:71045779-71045322 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 57 |
| Conread position: | 37-477 |
| Cow position: | chr1:16972814-16973268 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 10 |
| Conread position: | 40-254 |
| Cow position: | chr1:765544-765770 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 40-267 |
| Cow position: | chr1:84015899-84015661 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 100, 45 |
| Conread position: | 40-284 |
| Cow position: | chr1:10942074-10942319 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 54 |
| Conread position: | 40-284 |
| Cow position: | chr1:10964312-10964067 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 54 |
| Conread position: | 40-295 |
| Cow position: | chr1:78794716-78794974 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 31, 100 |
| Conread position: | 40-309 |
| Cow position: | chr1:25793414-25793689 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 40-311 |
| Cow position: | chr1:60707424-60707152 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 180, 58 |
| Conread position: | 40-315 |
| Cow position: | chr1:6939614-6939894 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 53, 117 |
| Conread position: | 40-315 |
| Cow position: | chr1:98790655-98790377 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 178, 82 |
| Conread position: | 40-397 |
| Cow position: | chr1:63504356-63503994 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 118 |
| Conread position: | 40-430 |
| Cow position: | chr1:61391764-61392174 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 284 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 40-477 |
| Cow position: | chr1:30034553-30034133 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 301 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 121, 46 |
| Conread position: | 40-477 |
| Cow position: | chr1:51981242-51980809 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 308 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 171, 47 |
| Conread position: | 41-166 |
| Cow position: | chr1:4788557-4788429 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 45, 59 |
| Conread position: | 41-197 |
| Cow position: | chr1:72732060-72731902 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 8, 15 |
| Conread position: | 41-210 |
| Cow position: | chr1:60281392-60281221 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 70 |
| Conread position: | 41-210 |
| Cow position: | chr1:85596024-85596200 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 46, 61 |
| Conread position: | 41-212 |
| Cow position: | chr1:5278391-5278564 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 99, 77 |
| Conread position: | 41-212 |
| Cow position: | chr1:75347644-75347469 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 41-219 |
| Cow position: | chr1:57783027-57782851 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 44, 97 |
| Conread position: | 41-219 |
| Cow position: | chr1:90413402-90413221 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 41-244 |
| Cow position: | chr1:20581963-20581761 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 44, 78 |
| Conread position: | 41-245 |
| Cow position: | chr1:43703431-43703226 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 5, 54 |
| Conread position: | 41-247 |
| Cow position: | chr1:42174569-42174779 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 52, 31 |
| Conread position: | 41-247 |
| Cow position: | chr1:69004417-69004202 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 44, 95 |
| Conread position: | 41-282 |
| Cow position: | chr1:64189520-64189277 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 128 |
| Conread position: | 41-283 |
| Cow position: | chr1:31390570-31390812 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 95, 135 |
| Conread position: | 41-283 |
| Cow position: | chr1:69415690-69415943 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 248 |
| Conread position: | 41-284 |
| Cow position: | chr1:25886056-25886302 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 22, 16 |
| Conread position: | 41-284 |
| Cow position: | chr1:54162785-54163037 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 100, 199 |
| Conread position: | 41-284 |
| Cow position: | chr1:85411600-85411352 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 41-284 |
| Cow position: | chr1:92642429-92642669 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 41-285 |
| Cow position: | chr1:77118514-77118755 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 50, 27 |
| Conread position: | 41-289 |
| Cow position: | chr1:73761336-73761584 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 53, 18 |
| Conread position: | 41-303 |
| Cow position: | chr1:56635117-56634853 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 41, 31 |
| Conread position: | 41-306 |
| Cow position: | chr1:8869640-8869911 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 43, 98 |
| Conread position: | 41-309 |
| Cow position: | chr1:80764516-80764784 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 121 |
| Conread position: | 41-311 |
| Cow position: | chr1:90423061-90423337 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 209 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 44, 123 |
| Conread position: | 41-312 |
| Cow position: | chr1:31871448-31871168 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 255 |
| Conread position: | 41-312 |
| Cow position: | chr1:57247454-57247184 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 50, 6 |
| Conread position: | 41-312 |
| Cow position: | chr1:57263973-57264238 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 46, 160 |
| Conread position: | 41-312 |
| Cow position: | chr1:74947098-74947369 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 41-312 |
| Cow position: | chr1:93110597-93110877 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 41-312 |
| Cow position: | chr1:95765071-95765341 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 117, 28 |
| Conread position: | 41-315 |
| Cow position: | chr1:30413614-30413330 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 41-315 |
| Cow position: | chr1:79165063-79165347 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 43, 63 |
| Conread position: | 41-335 |
| Cow position: | chr1:46839624-46839319 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 224 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 45, 260 |
| Conread position: | 41-349 |
| Cow position: | chr1:77132629-77132309 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 26, 206 |
| Conread position: | 41-363 |
| Cow position: | chr1:21934154-21934488 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 34 |
| Conread position: | 41-400 |
| Cow position: | chr1:100706150-100705786 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 100, 47 |
| Conread position: | 41-417 |
| Cow position: | chr1:5872952-5873337 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 273 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 41-421 |
| Cow position: | chr1:8243396-8243007 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 97, 44 |
| Conread position: | 41-422 |
| Cow position: | chr1:45288852-45289243 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 52 |
| Conread position: | 41-423 |
| Cow position: | chr1:52774509-52774880 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 41, 99 |
| Conread position: | 41-423 |
| Cow position: | chr1:61724000-61724393 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 283 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 9, 20 |
| Conread position: | 41-431 |
| Cow position: | chr1:41735600-41735998 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 119 |
| Conread position: | 41-438 |
| Cow position: | chr1:94526521-94526108 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 58 |
| Conread position: | 41-471 |
| Cow position: | chr1:52206699-52206274 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 92 |
| Conread position: | 41-473 |
| Cow position: | chr1:6794902-6795363 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 261 |
| Conread position: | 41-473 |
| Cow position: | chr1:55202601-55203054 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 98 |
| Conread position: | 41-475 |
| Cow position: | chr1:80973584-80974044 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 412 |
| Conread position: | 41-476 |
| Cow position: | chr1:5162025-5162485 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 201 |
| Conread position: | 41-476 |
| Cow position: | chr1:99807697-99808152 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 210 |
| Conread position: | 41-477 |
| Cow position: | chr1:666385-665953 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 311 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 107, 51 |
| Conread position: | 41-477 |
| Cow position: | chr1:3323887-3323436 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 309 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 41-477 |
| Cow position: | chr1:17291622-17292076 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 301 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 52, 46 |
| Conread position: | 41-477 |
| Cow position: | chr1:21787355-21786900 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 251 |
| Conread position: | 41-477 |
| Cow position: | chr1:30441976-30441527 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 30 |
| Conread position: | 41-477 |
| Cow position: | chr1:40497587-40497154 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 14 |
| Conread position: | 41-477 |
| Cow position: | chr1:66355694-66356133 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 109 |
| Conread position: | 41-477 |
| Cow position: | chr1:71136172-71135740 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 117 |
| Conread position: | 41-477 |
| Cow position: | chr1:78092056-78091614 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 305 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 25, 39 |
| Conread position: | 41-477 |
| Cow position: | chr1:97422276-97422716 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 76 |
| Conread position: | 41-477 |
| Cow position: | chr1:99627811-99628241 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 310 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 44, 98 |
| Conread position: | 42-221 |
| Cow position: | chr1:101771919-101771748 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 93, 17 |
| Conread position: | 42-242 |
| Cow position: | chr1:84235313-84235516 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 96, 8 |
| Conread position: | 42-289 |
| Cow position: | chr1:101812256-101812507 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 28 |
| Conread position: | 42-312 |
| Cow position: | chr1:32244377-32244651 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 47, 225 |
| Conread position: | 42-312 |
| Cow position: | chr1:70533919-70534186 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 11 |
| Conread position: | 42-349 |
| Cow position: | chr1:26688453-26688773 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 266 |
| Conread position: | 42-376 |
| Cow position: | chr1:85596962-85596624 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 98, 164 |
| Conread position: | 43-211 |
| Cow position: | chr1:2997966-2997795 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 43-246 |
| Cow position: | chr1:89548211-89548000 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 43-275 |
| Cow position: | chr1:15691352-15691119 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 93, 17 |
| Conread position: | 43-283 |
| Cow position: | chr1:7142828-7143075 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 43-284 |
| Cow position: | chr1:56477609-56477367 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 110 |
| Conread position: | 43-284 |
| Cow position: | chr1:64302227-64302461 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 43-284 |
| Cow position: | chr1:92010326-92010086 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 42, 56 |
| Conread position: | 43-291 |
| Cow position: | chr1:79278429-79278676 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 95, 29 |
| Conread position: | 43-310 |
| Cow position: | chr1:56643569-56643839 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 131 |
| Conread position: | 43-311 |
| Cow position: | chr1:49131093-49131373 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 212 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 48, 139 |
| Conread position: | 43-312 |
| Cow position: | chr1:32341191-32341459 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 41, 9 |
| Conread position: | 43-312 |
| Cow position: | chr1:54478346-54478070 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 40, 251 |
| Conread position: | 43-315 |
| Cow position: | chr1:33986492-33986772 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 43-430 |
| Cow position: | chr1:84255784-84255377 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 282 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 50, 252 |
| Conread position: | 43-460 |
| Cow position: | chr1:10719461-10719897 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 252 |
| Conread position: | 43-472 |
| Cow position: | chr1:1825799-1825376 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 299 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 92, 162 |
| Conread position: | 43-477 |
| Cow position: | chr1:30066637-30066213 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 44-207 |
| Cow position: | chr1:38692683-38692517 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 44-477 |
| Cow position: | chr1:13056511-13056936 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 56 |
| Conread position: | 45-250 |
| Cow position: | chr1:89443463-89443670 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 40, 94 |
| Conread position: | 45-276 |
| Cow position: | chr1:45673727-45673492 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 205 |
| Conread position: | 45-315 |
| Cow position: | chr1:82370759-82370496 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 38, 94 |
| Conread position: | 46-420 |
| Cow position: | chr1:11913865-11914242 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 34 |
| Conread position: | 46-477 |
| Cow position: | chr1:81162017-81161594 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 62 |
| Conread position: | 50-279 |
| Cow position: | chr1:81301081-81301317 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 34, 18 |
| Conread position: | 51-203 |
| Cow position: | chr1:50045811-50045657 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 87, 40 |
| Conread position: | 51-218 |
| Cow position: | chr1:63314843-63314671 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 51-309 |
| Cow position: | chr1:23099912-23099645 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 25, 43 |
| Conread position: | 51-315 |
| Cow position: | chr1:29975590-29975852 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 34, 100 |
| Conread position: | 51-475 |
| Cow position: | chr1:73522138-73522558 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 27 |
| Conread position: | 52-221 |
| Cow position: | chr1:52449597-52449768 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 54-343 |
| Cow position: | chr1:25383675-25383373 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 8, 254 |
| Conread position: | 55-212 |
| Cow position: | chr1:73196226-73196382 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 55-281 |
| Cow position: | chr1:86614868-86614637 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 163, 71 |
| Conread position: | 55-315 |
| Cow position: | chr1:68826899-68827160 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 93, 38 |
| Conread position: | 55-315 |
| Cow position: | chr1:82337771-82338040 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 40, 99 |
| Conread position: | 56-404 |
| Cow position: | chr1:12678523-12678164 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 229, 14 |
| Conread position: | 56-423 |
| Cow position: | chr1:82884381-82884758 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 229 |
| Conread position: | 57-185 |
| Cow position: | chr1:22387939-22388066 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 84, 11 |
| Conread position: | 57-284 |
| Cow position: | chr1:88529793-88530015 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 26, 77 |
| Conread position: | 57-444 |
| Cow position: | chr1:43352651-43353044 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 30, 122 |
| Conread position: | 59-310 |
| Cow position: | chr1:81563739-81563483 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 82, 16 |
| Conread position: | 59-477 |
| Cow position: | chr1:21679158-21678734 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 297 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 36, 243 |
| Conread position: | 60-279 |
| Cow position: | chr1:5062029-5061799 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 181 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 81, 9 |
| Conread position: | 60-477 |
| Cow position: | chr1:71303132-71302711 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 189 |
| Conread position: | 61-477 |
| Cow position: | chr1:14528193-14528626 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 229 |
| Conread position: | 63-417 |
| Cow position: | chr1:1403485-1403830 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 98, 11 |
| Conread position: | 64-262 |
| Cow position: | chr1:4414208-4414413 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 64-300 |
| Cow position: | chr1:62732575-62732335 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 89, 227 |
| Conread position: | 64-443 |
| Cow position: | chr1:7800612-7800222 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 254 |
| Conread position: | 65-200 |
| Cow position: | chr1:25610479-25610615 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 75, 15 |
| Conread position: | 65-303 |
| Cow position: | chr1:21954234-21954461 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 65-307 |
| Cow position: | chr1:81319287-81319043 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 134, 19 |
| Conread position: | 65-350 |
| Cow position: | chr1:68217367-68217656 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 22, 28 |
| Conread position: | 65-383 |
| Cow position: | chr1:96478693-96478352 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 73, 23 |
| Conread position: | 65-431 |
| Cow position: | chr1:61735441-61735823 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 29, 20 |
| Conread position: | 65-477 |
| Cow position: | chr1:63390773-63391190 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 292 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 19, 35 |
| Conread position: | 65-516 |
| Cow position: | chr1:3456864-3456412 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 317 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 20, 35 |
| Conread position: | 66-212 |
| Cow position: | chr1:46205815-46205666 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 66-287 |
| Cow position: | chr1:51836567-51836341 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 66-315 |
| Cow position: | chr1:97619837-97620095 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 19, 230 |
| Conread position: | 66-432 |
| Cow position: | chr1:100324747-100325116 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 252 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 95, 72 |
| Conread position: | 66-472 |
| Cow position: | chr1:53425170-53424774 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 22 |
| Conread position: | 67-315 |
| Cow position: | chr1:92551140-92551390 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 71, 45 |
| Conread position: | 68-225 |
| Cow position: | chr1:45638482-45638324 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 67, 20 |
| Conread position: | 68-312 |
| Cow position: | chr1:45019814-45020055 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 81, 19 |
| Conread position: | 69-477 |
| Cow position: | chr1:28679278-28678865 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 25, 10 |
| Conread position: | 70-284 |
| Cow position: | chr1:55705258-55705481 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 8, 17 |
| Conread position: | 72-422 |
| Cow position: | chr1:86113414-86113785 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 261 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 69, 102 |
| Conread position: | 72-445 |
| Cow position: | chr1:31348449-31348825 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 69, 206 |
| Conread position: | 73-212 |
| Cow position: | chr1:13195431-13195572 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 75-283 |
| Cow position: | chr1:69678339-69678552 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 65 |
| Conread position: | 75-289 |
| Cow position: | chr1:4294041-4293830 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 68, 12 |
| Conread position: | 75-430 |
| Cow position: | chr1:41697046-41696680 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 16 |
| Conread position: | 75-430 |
| Cow position: | chr1:102349767-102350150 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 265 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 76-255 |
| Cow position: | chr1:51654397-51654212 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 65, 15 |
| Conread position: | 76-284 |
| Cow position: | chr1:22910359-22910146 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 9, 56 |
| Conread position: | 76-300 |
| Cow position: | chr1:94404198-94403976 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 64, 15 |
| Conread position: | 76-354 |
| Cow position: | chr1:3751954-3752243 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 62, 17 |
| Conread position: | 76-423 |
| Cow position: | chr1:3167089-3167439 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 137, 23 |
| Conread position: | 76-430 |
| Cow position: | chr1:41004376-41004746 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 202 |
| Conread position: | 76-477 |
| Cow position: | chr1:61564783-61564375 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 100 |
| Conread position: | 76-477 |
| Cow position: | chr1:92963383-92962966 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 285 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 11, 62 |
| Conread position: | 76-477 |
| Cow position: | chr1:97284394-97284793 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 290 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 56, 11 |
| Conread position: | 77-212 |
| Cow position: | chr1:75199126-75198993 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 77-337 |
| Cow position: | chr1:37706990-37707246 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 105, 21 |
| Conread position: | 77-384 |
| Cow position: | chr1:39418137-39418448 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 66, 20 |
| Conread position: | 77-422 |
| Cow position: | chr1:8600-8251 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 87, 15 |
| Conread position: | 77-424 |
| Cow position: | chr1:29671537-29671884 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 253 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 87, 26 |
| Conread position: | 77-477 |
| Cow position: | chr1:95176922-95176517 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 284 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 14, 59 |
| Conread position: | 78-212 |
| Cow position: | chr1:28567448-28567581 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 78-312 |
| Cow position: | chr1:3776634-3776866 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 104, 14 |
| Conread position: | 78-430 |
| Cow position: | chr1:89349947-89349601 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 63, 115 |
| Conread position: | 78-477 |
| Cow position: | chr1:4441127-4441521 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 20 |
| Conread position: | 78-477 |
| Cow position: | chr1:56229227-56228834 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 287 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 124, 15 |
| Conread position: | 79-278 |
| Cow position: | chr1:52956237-52956038 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 64, 134 |
| Conread position: | 79-362 |
| Cow position: | chr1:47009012-47008724 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 69, 13 |
| Conread position: | 79-423 |
| Cow position: | chr1:84239128-84239459 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 12, 135 |
| Conread position: | 80-276 |
| Cow position: | chr1:97786163-97785964 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 60, 48 |
| Conread position: | 80-288 |
| Cow position: | chr1:80555212-80555414 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 11 |
| Conread position: | 80-315 |
| Cow position: | chr1:20422222-20422462 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 44, 97 |
| Conread position: | 80-401 |
| Cow position: | chr1:85651786-85652114 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 122 |
| Conread position: | 80-477 |
| Cow position: | chr1:76850743-76851167 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 168 |
| Conread position: | 81-275 |
| Cow position: | chr1:64938958-64939161 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 12, 109 |
| Conread position: | 81-281 |
| Cow position: | chr1:24558890-24558684 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 76 |
| Conread position: | 81-282 |
| Cow position: | chr1:71078975-71079182 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 15, 95 |
| Conread position: | 81-320 |
| Cow position: | chr1:6881244-6881486 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 59, 40 |
| Conread position: | 81-367 |
| Cow position: | chr1:63434822-63435116 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 10, 101 |
| Conread position: | 81-411 |
| Cow position: | chr1:78750705-78751063 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 81-477 |
| Cow position: | chr1:28176989-28176586 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 81-477 |
| Cow position: | chr1:52496766-52496360 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 276 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 14, 363 |
| Conread position: | 81-477 |
| Cow position: | chr1:61661314-61661727 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 17, 25 |
| Conread position: | 82-285 |
| Cow position: | chr1:48411294-48411487 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 108 |
| Conread position: | 82-477 |
| Cow position: | chr1:44165063-44164658 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 59, 207 |
| Conread position: | 83-306 |
| Cow position: | chr1:78857341-78857568 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 208 |
| Conread position: | 86-439 |
| Cow position: | chr1:50634424-50634799 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 286 |
| Conread position: | 87-310 |
| Cow position: | chr1:67995107-67994880 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 48, 73 |
| Conread position: | 90-286 |
| Cow position: | chr1:81277229-81277432 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 16, 74 |
| Conread position: | 90-307 |
| Cow position: | chr1:59910322-59910103 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 57, 73 |
| Conread position: | 90-364 |
| Cow position: | chr1:41056649-41056373 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 129, 67 |
| Conread position: | 90-477 |
| Cow position: | chr1:20521718-20522097 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 47 |
| Conread position: | 91-309 |
| Cow position: | chr1:98613206-98612993 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 122, 40 |
| Conread position: | 91-420 |
| Cow position: | chr1:12595932-12596274 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 242 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 50, 166 |
| Conread position: | 91-477 |
| Cow position: | chr1:1981143-1981529 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 270 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 60, 194 |
| Conread position: | 91-477 |
| Cow position: | chr1:53458668-53458288 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 277 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 50, 120 |
| Conread position: | 92-283 |
| Cow position: | chr1:30882362-30882542 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 126, 46 |
| Conread position: | 92-299 |
| Cow position: | chr1:99208703-99208912 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 63 |
| Conread position: | 92-312 |
| Cow position: | chr1:52506584-52506796 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 93 |
| Conread position: | 92-350 |
| Cow position: | chr1:77720264-77720523 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 49, 205 |
| Conread position: | 92-423 |
| Cow position: | chr1:85028924-85028588 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 240 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 12, 63 |
| Conread position: | 92-477 |
| Cow position: | chr1:85361831-85361437 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 85 |
| Conread position: | 94-476 |
| Cow position: | chr1:3340904-3340508 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 283 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 115, 60 |
| Conread position: | 95-417 |
| Cow position: | chr1:39112912-39112597 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 118, 70 |
| Conread position: | 98-315 |
| Cow position: | chr1:90864328-90864555 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 43, 199 |
| Conread position: | 98-398 |
| Cow position: | chr1:97524491-97524788 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 41 |
| Conread position: | 99-299 |
| Cow position: | chr1:70236324-70236532 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 39, 152 |
| Conread position: | 99-312 |
| Cow position: | chr1:14379571-14379782 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 42, 104 |
| Conread position: | 99-411 |
| Cow position: | chr1:21508355-21508032 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 72, 182 |
| Conread position: | 99-419 |
| Cow position: | chr1:100421796-100421475 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 58, 39 |
| Conread position: | 99-423 |
| Cow position: | chr1:69695028-69695381 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 37, 210 |
| Conread position: | 99-431 |
| Cow position: | chr1:74822413-74822069 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 97, 55 |
| Conread position: | 99-477 |
| Cow position: | chr1:72011845-72012224 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 262 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 41, 118 |
| Conread position: | 105-430 |
| Cow position: | chr1:97761572-97761248 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 108, 52 |
| Conread position: | 109-477 |
| Cow position: | chr1:3556546-3556923 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 16 |
| Conread position: | 110-477 |
| Cow position: | chr1:36613322-36613692 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 268 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 28, 42 |
| Conread position: | 111-477 |
| Cow position: | chr1:31414009-31414396 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 133-477 |
| Cow position: | chr1:1743361-1743719 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 82, 199 |
| Conread position: | 166-477 |
| Cow position: | chr1:56719215-56718897 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 49, 95 |
| Conread position: | 167-477 |
| Cow position: | chr1:63037113-63036794 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 13, 137 |
| Conread position: | 174-477 |
| Cow position: | chr1:57390469-57390780 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 26 |
| Conread position: | 214-473 |
| Cow position: | chr1:25610661-25610917 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 105, 72 |
| Conread position: | 226-477 |
| Cow position: | chr1:39479395-39479641 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 47, 61 |
| Conread position: | 236-477 |
| Cow position: | chr1:2994894-2994639 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 78, 50 |
| Conread position: | 236-477 |
| Cow position: | chr1:2997644-2997389 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 78, 50 |
| Conread position: | 239-477 |
| Cow position: | chr1:80439167-80439398 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 80, 21 |
| Conread position: | 315-477 |
| Cow position: | chr1:74302126-74302279 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 316-469 |
| Cow position: | chr1:42554988-42554830 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 69, 113 |
| Conread position: | 322-477 |
| Cow position: | chr1:73196856-73197019 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 324-477 |
| Cow position: | chr1:14981351-14981504 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 43 |
| Conread position: | 325-477 |
| Cow position: | chr1:32630125-32629975 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 56, 104 |
| Conread position: | 331-477 |
| Cow position: | chr1:67994884-67994735 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 31 |
| Conread position: | 333-477 |
| Cow position: | chr1:33986822-33986964 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 55, 93 |
Show alignments to all cow chromosomes.