Cow genome map

Conread name: Pig1-117N15

Conread position: 32-312
Cow position:
Alignm length: 298
Alignm identity: 204
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 53, 226

Conread position: 34-289
Cow position:
Alignm length: 267
Alignm identity: 188
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 104, 63

Conread position: 34-477
Cow position:
Alignm length: 454
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 51

Conread position: 35-402
Cow position:
Alignm length: 385
Alignm identity: 264
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 61, 50

Conread position: 37-477
Cow position:
Alignm length: 454
Alignm identity: 305
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 124, 49

Conread position: 40-312
Cow position:
Alignm length: 281
Alignm identity: 190
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 31, 58

Conread position: 40-383
Cow position:
Alignm length: 360
Alignm identity: 251
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 24, 61

Conread position: 40-433
Cow position:
Alignm length: 413
Alignm identity: 278
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 30, 252

Conread position: 40-441
Cow position:
Alignm length: 419
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 216

Conread position: 40-473
Cow position:
Alignm length: 454
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 135

Conread position: 40-476
Cow position:
Alignm length: 462
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 55

Conread position: 40-477
Cow position:
Alignm length: 462
Alignm identity: 314
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 42, 20

Conread position: 41-199
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 41-209
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 41-212
Cow position:
Alignm length: 176
Alignm identity: 142
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 47, 19

Conread position: 41-212
Cow position:
Alignm length: 177
Alignm identity: 146
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 44, 129

Conread position: 41-252
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 34, 106

Conread position: 41-257
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 127, 27

Conread position: 41-278
Cow position:
Alignm length: 250
Alignm identity: 170
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 7

Conread position: 41-279
Cow position:
Alignm length: 251
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 30

Conread position: 41-284
Cow position:
Alignm length: 248
Alignm identity: 169
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 35, 70

Conread position: 41-284
Cow position:
Alignm length: 252
Alignm identity: 177
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 41-300
Cow position:
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 135

Conread position: 41-303
Cow position:
Alignm length: 270
Alignm identity: 187
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 44, 111

Conread position: 41-310
Cow position:
Alignm length: 285
Alignm identity: 206
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 42, 142

Conread position: 41-312
Cow position:
Alignm length: 283
Alignm identity: 211
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 52, 228

Conread position: 41-312
Cow position:
Alignm length: 294
Alignm identity: 215
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 40, 131

Conread position: 41-326
Cow position:
Alignm length: 288
Alignm identity: 168
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 99

Conread position: 41-372
Cow position:
Alignm length: 350
Alignm identity: 248
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 178, 97

Conread position: 41-430
Cow position:
Alignm length: 419
Alignm identity: 271
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 50, 176

Conread position: 41-441
Cow position:
Alignm length: 414
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 395

Conread position: 41-454
Cow position:
Alignm length: 435
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 45

Conread position: 41-470
Cow position:
Alignm length: 441
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 142

Conread position: 41-474
Cow position:
Alignm length: 452
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 137

Conread position: 41-477
Cow position:
Alignm length: 459
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 57

Conread position: 41-477
Cow position:
Alignm length: 459
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 34

Conread position: 41-477
Cow position:
Alignm length: 450
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 255

Conread position: 41-477
Cow position:
Alignm length: 463
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 34

Conread position: 41-477
Cow position:
Alignm length: 457
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 31

Conread position: 41-477
Cow position:
Alignm length: 460
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 262

Conread position: 42-186
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 18

Conread position: 42-271
Cow position:
Alignm length: 236
Alignm identity: 158
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 51, 11

Conread position: 42-295
Cow position:
Alignm length: 264
Alignm identity: 188
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 99, 140

Conread position: 42-433
Cow position:
Alignm length: 409
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 247

Conread position: 42-471
Cow position:
Alignm length: 444
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 94

Conread position: 42-477
Cow position:
Alignm length: 452
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 164

Conread position: 42-477
Cow position:
Alignm length: 448
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 30

Conread position: 42-477
Cow position:
Alignm length: 450
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 248

Conread position: 43-240
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 25

Conread position: 43-284
Cow position:
Alignm length: 260
Alignm identity: 197
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 95, 0

Conread position: 43-327
Cow position:
Alignm length: 288
Alignm identity: 206
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 40, 56

Conread position: 43-476
Cow position:
Alignm length: 450
Alignm identity: 316
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 21, 122

Conread position: 44-290
Cow position:
Alignm length: 254
Alignm identity: 173
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 39, 24

Conread position: 44-338
Cow position:
Alignm length: 301
Alignm identity: 202
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 162, 75

Conread position: 44-338
Cow position:
Alignm length: 302
Alignm identity: 207
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 48, 113

Conread position: 44-423
Cow position:
Alignm length: 391
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 46

Conread position: 44-472
Cow position:
Alignm length: 449
Alignm identity: 299
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 92, 24

Conread position: 45-326
Cow position:
Alignm length: 295
Alignm identity: 203
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 43, 15

Conread position: 45-472
Cow position:
Alignm length: 439
Alignm identity: 296
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 96, 15

Conread position: 45-477
Cow position:
Alignm length: 454
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 32

Conread position: 50-284
Cow position:
Alignm length: 245
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 50-477
Cow position:
Alignm length: 446
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 240

Conread position: 51-476
Cow position:
Alignm length: 435
Alignm identity: 296
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 87, 12

Conread position: 53-323
Cow position:
Alignm length: 274
Alignm identity: 182
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 7, 20

Conread position: 55-312
Cow position:
Alignm length: 268
Alignm identity: 178
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 95, 135

Conread position: 55-383
Cow position:
Alignm length: 351
Alignm identity: 242
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 29, 38

Conread position: 55-467
Cow position:
Alignm length: 440
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 109

Conread position: 56-311
Cow position:
Alignm length: 266
Alignm identity: 182
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 92, 238

Conread position: 56-477
Cow position:
Alignm length: 443
Alignm identity: 281
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 7

Conread position: 57-303
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 78, 28

Conread position: 57-303
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 78, 28

Conread position: 60-306
Cow position:
Alignm length: 255
Alignm identity: 196
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 81, 26

Conread position: 60-312
Cow position:
Alignm length: 261
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 189

Conread position: 62-477
Cow position:
Alignm length: 426
Alignm identity: 289
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 28, 136

Conread position: 64-211
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 141, 86

Conread position: 66-212
Cow position:
Alignm length: 150
Alignm identity: 125
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 66-266
Cow position:
Alignm length: 213
Alignm identity: 161
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 72, 19

Conread position: 67-477
Cow position:
Alignm length: 422
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 139

Conread position: 68-398
Cow position:
Alignm length: 350
Alignm identity: 234
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 16, 241

Conread position: 69-477
Cow position:
Alignm length: 425
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 30

Conread position: 70-475
Cow position:
Alignm length: 431
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 64

Conread position: 75-312
Cow position:
Alignm length: 247
Alignm identity: 172
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 65, 79

Conread position: 75-431
Cow position:
Alignm length: 370
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 18

Conread position: 75-477
Cow position:
Alignm length: 418
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 64

Conread position: 76-310
Cow position:
Alignm length: 246
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 24

Conread position: 76-364
Cow position:
Alignm length: 309
Alignm identity: 213
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 62, 17

Conread position: 76-417
Cow position:
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 27

Conread position: 76-430
Cow position:
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 77-445
Cow position:
Alignm length: 387
Alignm identity: 266
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 11, 75

Conread position: 79-383
Cow position:
Alignm length: 309
Alignm identity: 216
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 62, 124

Conread position: 79-430
Cow position:
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 127

Conread position: 80-312
Cow position:
Alignm length: 238
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 88

Conread position: 81-310
Cow position:
Alignm length: 237
Alignm identity: 175
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 55, 83

Conread position: 82-483
Cow position:
Alignm length: 415
Alignm identity: 276
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 66, 17

Conread position: 83-289
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 116

Conread position: 83-468
Cow position:
Alignm length: 395
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 111

Conread position: 84-477
Cow position:
Alignm length: 411
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 60

Conread position: 90-282
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 122, 0

Conread position: 90-310
Cow position:
Alignm length: 229
Alignm identity: 178
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 43, 196

Conread position: 90-326
Cow position:
Alignm length: 248
Alignm identity: 190
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 59, 222

Conread position: 90-404
Cow position:
Alignm length: 321
Alignm identity: 229
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 51, 134

Conread position: 90-473
Cow position:
Alignm length: 415
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 37

Conread position: 90-473
Cow position:
Alignm length: 392
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 59

Conread position: 91-312
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 122, 42

Conread position: 91-423
Cow position:
Alignm length: 356
Alignm identity: 233
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 60, 8

Conread position: 91-471
Cow position:
Alignm length: 397
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 46

Conread position: 92-212
Cow position:
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 92-312
Cow position:
Alignm length: 225
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 183

Conread position: 92-315
Cow position:
Alignm length: 233
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 61

Conread position: 92-373
Cow position:
Alignm length: 286
Alignm identity: 192
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 76, 64

Conread position: 92-383
Cow position:
Alignm length: 309
Alignm identity: 218
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 79, 45

Conread position: 93-321
Cow position:
Alignm length: 239
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 46

Conread position: 95-430
Cow position:
Alignm length: 354
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 197

Conread position: 98-442
Cow position:
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 52

Conread position: 99-365
Cow position:
Alignm length: 281
Alignm identity: 195
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 39, 197

Conread position: 99-423
Cow position:
Alignm length: 338
Alignm identity: 222
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 39

Conread position: 99-456
Cow position:
Alignm length: 380
Alignm identity: 265
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 42, 215

Conread position: 103-283
Cow position:
Alignm length: 187
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 97, 28

Conread position: 103-473
Cow position:
Alignm length: 383
Alignm identity: 258
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 110, 155

Conread position: 109-282
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 11

Conread position: 109-430
Cow position:
Alignm length: 343
Alignm identity: 240
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 34, 56

Conread position: 113-377
Cow position:
Alignm length: 276
Alignm identity: 198
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 25, 144

Conread position: 114-476
Cow position:
Alignm length: 378
Alignm identity: 258
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 55, 40

Conread position: 117-350
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 175, 68

Conread position: 117-477
Cow position:
Alignm length: 367
Alignm identity: 249
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 16, 10

Conread position: 124-287
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 94, 59

Conread position: 158-477
Cow position:
Alignm length: 332
Alignm identity: 224
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 136

Conread position: 160-477
Cow position:
Alignm length: 344
Alignm identity: 235
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 41, 7

Conread position: 173-477
Cow position:
Alignm length: 324
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 271

Conread position: 217-477
Cow position:
Alignm length: 272
Alignm identity: 184
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 6, 70

Conread position: 219-477
Cow position:
Alignm length: 269
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 95, 67

Conread position: 253-477
Cow position:
Alignm length: 235
Alignm identity: 177
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 61, 24

Conread position: 310-483
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 75, 116

Conread position: 312-477
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 73, 117

Conread position: 321-477
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 64, 110

Conread position: 324-477
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 116

Conread position: 325-477
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 61, 11

Conread position: 335-473
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 105

Conread position: 340-477
Cow position:
Alignm length: 142
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 66

Conread position: 358-473
Cow position:
Alignm length: 120
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 71

Show alignments to all cow chromosomes.