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Cow genome map

           
Conread name:
           
Pig1-117N15
        

               
Conread position:
               
34-198
               

               
Cow position:
               
chr16:47368784-47368617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
48, 143
               

               
Conread position:
               
34-462
               

               
Cow position:
               
chr16:23738202-23737767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 76
               

               
Conread position:
               
35-283
               

               
Cow position:
               
chr16:42257472-42257219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
51, 182
               

               
Conread position:
               
35-284
               

               
Cow position:
               
chr16:19003067-19003305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
47, 88
               

               
Conread position:
               
35-314
               

               
Cow position:
               
chr16:46253666-46253950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
103, 222
               

               
Conread position:
               
35-345
               

               
Cow position:
               
chr16:18036967-18036668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 51
               

               
Conread position:
               
36-477
               

               
Cow position:
               
chr16:23990461-23990915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 260
               

               
Conread position:
               
40-270
               

               
Cow position:
               
chr16:26156121-26156355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 45
               

               
Conread position:
               
40-283
               

               
Cow position:
               
chr16:10148297-10148048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
40-312
               

               
Cow position:
               
chr16:10039829-10040097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
26, 54
               

               
Conread position:
               
40-315
               

               
Cow position:
               
chr16:27005218-27004938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 34
               

               
Conread position:
               
40-358
               

               
Cow position:
               
chr16:37380285-37379959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
40-358
               

               
Cow position:
               
chr16:39279055-39279389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
40-473
               

               
Cow position:
               
chr16:55308526-55308961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 90
               

               
Conread position:
               
40-477
               

               
Cow position:
               
chr16:31973752-31974190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 62
               

               
Conread position:
               
41-167
               

               
Cow position:
               
chr16:42312400-42312275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
41-180
               

               
Cow position:
               
chr16:37719172-37719031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
97, 81
               

               
Conread position:
               
41-190
               

               
Cow position:
               
chr16:49511594-49511447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
41-212
               

               
Cow position:
               
chr16:10303731-10303906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
41-212
               

               
Cow position:
               
chr16:16524340-16524515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
41-232
               

               
Cow position:
               
chr16:8236308-8236500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
172, 34
               

               
Conread position:
               
41-240
               

               
Cow position:
               
chr16:54426179-54425970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
41-247
               

               
Cow position:
               
chr16:44723015-44723216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
177, 74
               

               
Conread position:
               
41-254
               

               
Cow position:
               
chr16:23035282-23035498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 94
               

               
Conread position:
               
41-263
               

               
Cow position:
               
chr16:25463791-25463560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
41-274
               

               
Cow position:
               
chr16:8322968-8323210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
111, 51
               

               
Conread position:
               
41-276
               

               
Cow position:
               
chr16:13973272-13973506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
41-291
               

               
Cow position:
               
chr16:13232935-13233182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 52
               

               
Conread position:
               
41-295
               

               
Cow position:
               
chr16:49580096-49579836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
41-303
               

               
Cow position:
               
chr16:2308703-2308434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 245
               

               
Conread position:
               
41-306
               

               
Cow position:
               
chr16:36911029-36911284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
92, 127
               

               
Conread position:
               
41-312
               

               
Cow position:
               
chr16:4499449-4499182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 43
               

               
Conread position:
               
41-312
               

               
Cow position:
               
chr16:20025458-20025185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
100, 45
               

               
Conread position:
               
41-312
               

               
Cow position:
               
chr16:48385385-48385660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 250
               

               
Conread position:
               
41-315
               

               
Cow position:
               
chr16:3614761-3614486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
100, 124
               

               
Conread position:
               
41-315
               

               
Cow position:
               
chr16:19976985-19976703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
97, 43
               

               
Conread position:
               
41-316
               

               
Cow position:
               
chr16:13611440-13611708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
41-329
               

               
Cow position:
               
chr16:39417106-39417386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
41-383
               

               
Cow position:
               
chr16:13195325-13195664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
31, 68
               

               
Conread position:
               
41-391
               

               
Cow position:
               
chr16:20685439-20685769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
346, 19
               

               
Conread position:
               
41-415
               

               
Cow position:
               
chr16:4145080-4144688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
74, 67
               

               
Conread position:
               
41-423
               

               
Cow position:
               
chr16:7542303-7541911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 53
               

               
Conread position:
               
41-430
               

               
Cow position:
               
chr16:4857085-4857474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
25, 39
               

               
Conread position:
               
41-434
               

               
Cow position:
               
chr16:27013910-27013529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 95
               

               
Conread position:
               
41-438
               

               
Cow position:
               
chr16:10857606-10858020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 252
               

               
Conread position:
               
41-470
               

               
Cow position:
               
chr16:16402309-16402752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
97, 44
               

               
Conread position:
               
41-477
               

               
Cow position:
               
chr16:17606312-17605858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 96
               

               
Conread position:
               
41-477
               

               
Cow position:
               
chr16:18949613-18949185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 39
               

               
Conread position:
               
41-477
               

               
Cow position:
               
chr16:23066677-23066243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 96
               

               
Conread position:
               
41-477
               

               
Cow position:
               
chr16:36930302-36930741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
41-477
               

               
Cow position:
               
chr16:42340210-42339777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 51
               

               
Conread position:
               
42-230
               

               
Cow position:
               
chr16:22872354-22872543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
52, 105
               

               
Conread position:
               
42-476
               

               
Cow position:
               
chr16:53267739-53267295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 52
               

               
Conread position:
               
42-477
               

               
Cow position:
               
chr16:16963818-16963380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
129, 38
               

               
Conread position:
               
43-151
               

               
Cow position:
               
chr16:13027685-13027575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
93, 48
               

               
Conread position:
               
43-186
               

               
Cow position:
               
chr16:12072654-12072508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
43-206
               

               
Cow position:
               
chr16:52222313-52222480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
43-208
               

               
Cow position:
               
chr16:689716-689557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 70
               

               
Conread position:
               
43-225
               

               
Cow position:
               
chr16:45693161-45692975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
42, 179
               

               
Conread position:
               
43-263
               

               
Cow position:
               
chr16:20633866-20634091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
43-293
               

               
Cow position:
               
chr16:41608627-41608364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
43-476
               

               
Cow position:
               
chr16:30639349-30638908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
43-477
               

               
Cow position:
               
chr16:18427200-18426750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 263
               

               
Conread position:
               
44-212
               

               
Cow position:
               
chr16:43815917-43815759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 14
               

               
Conread position:
               
44-285
               

               
Cow position:
               
chr16:21905174-21904927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
157, 41
               

               
Conread position:
               
44-477
               

               
Cow position:
               
chr16:31419458-31419005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 145
               

               
Conread position:
               
45-211
               

               
Cow position:
               
chr16:5836591-5836426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
9, 95
               

               
Conread position:
               
45-284
               

               
Cow position:
               
chr16:50014536-50014297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
45-299
               

               
Cow position:
               
chr16:54515733-54515481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
93, 26
               

               
Conread position:
               
45-312
               

               
Cow position:
               
chr16:23681379-23681113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
45-360
               

               
Cow position:
               
chr16:14799728-14800051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
16, 246
               

               
Conread position:
               
47-320
               

               
Cow position:
               
chr16:51069907-51070197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
10, 256
               

               
Conread position:
               
48-477
               

               
Cow position:
               
chr16:54295009-54294577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
49-171
               

               
Cow position:
               
chr16:28829838-28829961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
49-284
               

               
Cow position:
               
chr16:4875999-4875764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 31
               

               
Conread position:
               
50-477
               

               
Cow position:
               
chr16:5415753-5416183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 43
               

               
Conread position:
               
51-309
               

               
Cow position:
               
chr16:11643355-11643102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
51-358
               

               
Cow position:
               
chr16:42734013-42734303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
54-199
               

               
Cow position:
               
chr16:31490084-31489937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 18
               

               
Conread position:
               
55-289
               

               
Cow position:
               
chr16:51784729-51784954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
90, 30
               

               
Conread position:
               
55-316
               

               
Cow position:
               
chr16:25287691-25287953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
86, 31
               

               
Conread position:
               
55-374
               

               
Cow position:
               
chr16:15808976-15808645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
32, 38
               

               
Conread position:
               
55-477
               

               
Cow position:
               
chr16:3918534-3918102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
55-477
               

               
Cow position:
               
chr16:32837543-32837965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 239
               

               
Conread position:
               
57-283
               

               
Cow position:
               
chr16:25043720-25043493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
34, 165
               

               
Conread position:
               
60-212
               

               
Cow position:
               
chr16:51994999-51994847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
63, 110
               

               
Conread position:
               
60-477
               

               
Cow position:
               
chr16:34210411-34210839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 236
               

               
Conread position:
               
61-306
               

               
Cow position:
               
chr16:5363891-5363639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
62-183
               

               
Cow position:
               
chr16:46680827-46680702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
63-477
               

               
Cow position:
               
chr16:11055475-11055069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
91, 30
               

               
Conread position:
               
64-206
               

               
Cow position:
               
chr16:25803410-25803551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
64-306
               

               
Cow position:
               
chr16:52219074-52218836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
70, 127
               

               
Conread position:
               
64-315
               

               
Cow position:
               
chr16:5243962-5243701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
74, 233
               

               
Conread position:
               
64-470
               

               
Cow position:
               
chr16:55586607-55587029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 376
               

               
Conread position:
               
64-477
               

               
Cow position:
               
chr16:13601087-13601513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
65-315
               

               
Cow position:
               
chr16:37117064-37116812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
76, 27
               

               
Conread position:
               
65-423
               

               
Cow position:
               
chr16:11568129-11568489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
107, 70
               

               
Conread position:
               
65-431
               

               
Cow position:
               
chr16:24148150-24147770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
26, 10
               

               
Conread position:
               
65-432
               

               
Cow position:
               
chr16:16177807-16177432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 100
               

               
Conread position:
               
65-452
               

               
Cow position:
               
chr16:33508050-33507654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
148, 10
               

               
Conread position:
               
65-476
               

               
Cow position:
               
chr16:28695327-28695738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
216, 10
               

               
Conread position:
               
65-477
               

               
Cow position:
               
chr16:40562221-40561801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
76, 9
               

               
Conread position:
               
65-477
               

               
Cow position:
               
chr16:46752282-46752704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
52, 21
               

               
Conread position:
               
66-212
               

               
Cow position:
               
chr16:39237935-39237789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
66-311
               

               
Cow position:
               
chr16:37452625-37452874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
72, 160
               

               
Conread position:
               
66-423
               

               
Cow position:
               
chr16:8621223-8620870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 124
               

               
Conread position:
               
66-456
               

               
Cow position:
               
chr16:4763123-4762721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 120
               

               
Conread position:
               
66-477
               

               
Cow position:
               
chr16:28111928-28112345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 222
               

               
Conread position:
               
67-477
               

               
Cow position:
               
chr16:31558884-31558469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
11, 173
               

               
Conread position:
               
68-477
               

               
Cow position:
               
chr16:9933143-9932739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
70-427
               

               
Cow position:
               
chr16:39385393-39385016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
68, 22
               

               
Conread position:
               
72-278
               

               
Cow position:
               
chr16:13683775-13683998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
73-477
               

               
Cow position:
               
chr16:37924182-37924587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 91
               

               
Conread position:
               
75-385
               

               
Cow position:
               
chr16:18496181-18496502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 221
               

               
Conread position:
               
76-312
               

               
Cow position:
               
chr16:47820547-47820312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
129, 62
               

               
Conread position:
               
76-421
               

               
Cow position:
               
chr16:4910546-4910910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
62, 219
               

               
Conread position:
               
76-477
               

               
Cow position:
               
chr16:15824464-15824859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
14, 40
               

               
Conread position:
               
76-477
               

               
Cow position:
               
chr16:49126208-49126608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 61
               

               
Conread position:
               
77-433
               

               
Cow position:
               
chr16:16265120-16265489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
64, 184
               

               
Conread position:
               
77-440
               

               
Cow position:
               
chr16:9845729-9846108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 10
               

               
Conread position:
               
77-477
               

               
Cow position:
               
chr16:35188232-35187824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
78-267
               

               
Cow position:
               
chr16:45676874-45677069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
78-423
               

               
Cow position:
               
chr16:18757862-18758219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
79-311
               

               
Cow position:
               
chr16:8704257-8704039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 118
               

               
Conread position:
               
79-315
               

               
Cow position:
               
chr16:43505825-43506060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
134, 56
               

               
Conread position:
               
81-303
               

               
Cow position:
               
chr16:18402662-18402446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
20, 123
               

               
Conread position:
               
82-263
               

               
Cow position:
               
chr16:10592408-10592227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
59, 17
               

               
Conread position:
               
82-346
               

               
Cow position:
               
chr16:7639965-7639694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
59, 36
               

               
Conread position:
               
82-427
               

               
Cow position:
               
chr16:18205935-18205576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
68, 114
               

               
Conread position:
               
82-432
               

               
Cow position:
               
chr16:51399772-51400134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
54, 11
               

               
Conread position:
               
82-477
               

               
Cow position:
               
chr16:4699009-4699378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
83-379
               

               
Cow position:
               
chr16:53553741-53554044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
58, 92
               

               
Conread position:
               
83-477
               

               
Cow position:
               
chr16:16424627-16425030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 206
               

               
Conread position:
               
83-477
               

               
Cow position:
               
chr16:30209729-30209355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
58, 141
               

               
Conread position:
               
84-309
               

               
Cow position:
               
chr16:8933452-8933675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
85-212
               

               
Cow position:
               
chr16:20260461-20260334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 7
               

               
Conread position:
               
85-466
               

               
Cow position:
               
chr16:17867499-17867878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 210
               

               
Conread position:
               
87-212
               

               
Cow position:
               
chr16:28267043-28267170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
87-284
               

               
Cow position:
               
chr16:47620350-47620146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
88-477
               

               
Cow position:
               
chr16:21095518-21095908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
89-287
               

               
Cow position:
               
chr16:8812115-8812324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
52, 178
               

               
Conread position:
               
89-423
               

               
Cow position:
               
chr16:25170362-25170013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
15, 208
               

               
Conread position:
               
89-477
               

               
Cow position:
               
chr16:20435638-20435239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 190
               

               
Conread position:
               
90-253
               

               
Cow position:
               
chr16:7785110-7784936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
90-432
               

               
Cow position:
               
chr16:32970112-32970458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
51, 134
               

               
Conread position:
               
91-278
               

               
Cow position:
               
chr16:50289115-50288929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
50, 123
               

               
Conread position:
               
91-315
               

               
Cow position:
               
chr16:23483259-23483026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 104
               

               
Conread position:
               
91-372
               

               
Cow position:
               
chr16:48494590-48494877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
50, 83
               

               
Conread position:
               
91-430
               

               
Cow position:
               
chr16:50417723-50418076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
122, 7
               

               
Conread position:
               
91-467
               

               
Cow position:
               
chr16:48340731-48341103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
60, 190
               

               
Conread position:
               
91-477
               

               
Cow position:
               
chr16:28816129-28816535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 338
               

               
Conread position:
               
91-477
               

               
Cow position:
               
chr16:42078875-42079263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
52, 158
               

               
Conread position:
               
91-477
               

               
Cow position:
               
chr16:47626218-47626622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 161
               

               
Conread position:
               
92-262
               

               
Cow position:
               
chr16:8068856-8069030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 73
               

               
Conread position:
               
92-312
               

               
Cow position:
               
chr16:33752161-33751939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 105
               

               
Conread position:
               
92-430
               

               
Cow position:
               
chr16:30939699-30939354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 187
               

               
Conread position:
               
92-477
               

               
Cow position:
               
chr16:42969963-42970356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 196
               

               
Conread position:
               
93-315
               

               
Cow position:
               
chr16:12169727-12169953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
48, 197
               

               
Conread position:
               
93-423
               

               
Cow position:
               
chr16:45139635-45139288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
57, 157
               

               
Conread position:
               
94-245
               

               
Cow position:
               
chr16:40732180-40732023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
94-477
               

               
Cow position:
               
chr16:42092423-42092799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
95-199
               

               
Cow position:
               
chr16:51880024-51880131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
95-422
               

               
Cow position:
               
chr16:3288981-3288654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
115, 42
               

               
Conread position:
               
96-477
               

               
Cow position:
               
chr16:18052057-18051664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 154
               

               
Conread position:
               
103-217
               

               
Cow position:
               
chr16:6998298-6998181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
103-420
               

               
Cow position:
               
chr16:32132479-32132157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
47, 121
               

               
Conread position:
               
112-476
               

               
Cow position:
               
chr16:37442181-37442566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
29, 185
               

               
Conread position:
               
112-476
               

               
Cow position:
               
chr16:44676817-44676467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
124-477
               

               
Cow position:
               
chr16:29655262-29654897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
132-309
               

               
Cow position:
               
chr16:11449689-11449513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
90, 154
               

               
Conread position:
               
136-473
               

               
Cow position:
               
chr16:24446184-24445833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
34, 165
               

               
Conread position:
               
138-287
               

               
Cow position:
               
chr16:12738249-12738094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 115
               

               
Conread position:
               
160-477
               

               
Cow position:
               
chr16:29205564-29205881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
26, 130
               

               
Conread position:
               
184-477
               

               
Cow position:
               
chr16:45654164-45654464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
49, 251
               

               
Conread position:
               
296-473
               

               
Cow position:
               
chr16:50113449-50113269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
8, 135
               

               
Conread position:
               
308-477
               

               
Cow position:
               
chr16:28267538-28267707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
67, 92
               

               
Conread position:
               
313-477
               

               
Cow position:
               
chr16:3566034-3565868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
56, 117
               

               
Conread position:
               
314-473
               

               
Cow position:
               
chr16:8703565-8703406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 115
               

               
Conread position:
               
317-477
               

               
Cow position:
               
chr16:27004887-27004725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
67, 112
               

               
Conread position:
               
320-475
               

               
Cow position:
               
chr16:43813813-43813657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 106
               

               
Conread position:
               
326-477
               

               
Cow position:
               
chr16:4979401-4979254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
328-477
               

               
Cow position:
               
chr16:12737836-12737686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
57, 101
               

               
Conread position:
               
335-477
               

               
Cow position:
               
chr16:56533584-56533442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 41
               
Show alignments to all cow chromosomes.