Cow genome map

Conread name: Pig1-117N15

Conread position: 32-205
Cow position:
Alignm length: 178
Alignm identity: 141
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 109, 0

Conread position: 34-282
Cow position:
Alignm length: 250
Alignm identity: 176
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 101, 7

Conread position: 34-469
Cow position:
Alignm length: 458
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 46

Conread position: 35-299
Cow position:
Alignm length: 275
Alignm identity: 204
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 133, 50

Conread position: 36-477
Cow position:
Alignm length: 465
Alignm identity: 315
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 102, 52

Conread position: 39-477
Cow position:
Alignm length: 461
Alignm identity: 303
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 27, 48

Conread position: 40-243
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 178, 47

Conread position: 40-284
Cow position:
Alignm length: 252
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 101, 32

Conread position: 40-312
Cow position:
Alignm length: 288
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 40-321
Cow position:
Alignm length: 285
Alignm identity: 189
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 110, 68

Conread position: 40-343
Cow position:
Alignm length: 322
Alignm identity: 222
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 35

Conread position: 40-422
Cow position:
Alignm length: 396
Alignm identity: 272
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 26, 49

Conread position: 40-430
Cow position:
Alignm length: 409
Alignm identity: 277
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 10, 16

Conread position: 40-462
Cow position:
Alignm length: 430
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 121

Conread position: 40-477
Cow position:
Alignm length: 467
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 29

Conread position: 41-168
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 88

Conread position: 41-192
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 44, 28

Conread position: 41-203
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 41-212
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 47, 90

Conread position: 41-212
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 95

Conread position: 41-214
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 19

Conread position: 41-233
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 91

Conread position: 41-247
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 52, 39

Conread position: 41-266
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 37, 27

Conread position: 41-285
Cow position:
Alignm length: 251
Alignm identity: 170
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 98

Conread position: 41-286
Cow position:
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 41-286
Cow position:
Alignm length: 251
Alignm identity: 177
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 22, 101

Conread position: 41-303
Cow position:
Alignm length: 263
Alignm identity: 188
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 51, 0

Conread position: 41-303
Cow position:
Alignm length: 268
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 36

Conread position: 41-306
Cow position:
Alignm length: 274
Alignm identity: 190
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 43

Conread position: 41-306
Cow position:
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 99

Conread position: 41-310
Cow position:
Alignm length: 279
Alignm identity: 206
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 100, 50

Conread position: 41-311
Cow position:
Alignm length: 278
Alignm identity: 200
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 95, 40

Conread position: 41-312
Cow position:
Alignm length: 278
Alignm identity: 185
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 140

Conread position: 41-312
Cow position:
Alignm length: 277
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 69

Conread position: 41-312
Cow position:
Alignm length: 278
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 99

Conread position: 41-312
Cow position:
Alignm length: 283
Alignm identity: 205
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 100, 44

Conread position: 41-337
Cow position:
Alignm length: 306
Alignm identity: 202
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 100, 250

Conread position: 41-358
Cow position:
Alignm length: 333
Alignm identity: 231
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 47, 245

Conread position: 41-364
Cow position:
Alignm length: 330
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 34

Conread position: 41-473
Cow position:
Alignm length: 458
Alignm identity: 312
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 71, 62

Conread position: 41-473
Cow position:
Alignm length: 460
Alignm identity: 309
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 174, 49

Conread position: 41-475
Cow position:
Alignm length: 456
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 144

Conread position: 41-477
Cow position:
Alignm length: 449
Alignm identity: 307
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 99

Conread position: 41-477
Cow position:
Alignm length: 447
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 15

Conread position: 41-477
Cow position:
Alignm length: 453
Alignm identity: 303
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 177, 14

Conread position: 41-477
Cow position:
Alignm length: 454
Alignm identity: 324
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 176, 28

Conread position: 41-477
Cow position:
Alignm length: 445
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 52

Conread position: 41-477
Cow position:
Alignm length: 450
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 121

Conread position: 41-479
Cow position:
Alignm length: 448
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 248

Conread position: 42-187
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 93, 17

Conread position: 42-295
Cow position:
Alignm length: 260
Alignm identity: 180
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 9, 27

Conread position: 42-417
Cow position:
Alignm length: 394
Alignm identity: 269
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 41, 161

Conread position: 43-171
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 43-219
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 17

Conread position: 43-237
Cow position:
Alignm length: 202
Alignm identity: 161
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 42, 0

Conread position: 43-445
Cow position:
Alignm length: 424
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 31

Conread position: 43-477
Cow position:
Alignm length: 465
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 43

Conread position: 44-206
Cow position:
Alignm length: 166
Alignm identity: 132
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 94, 156

Conread position: 44-284
Cow position:
Alignm length: 242
Alignm identity: 183
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 95

Conread position: 45-284
Cow position:
Alignm length: 247
Alignm identity: 171
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 22, 13

Conread position: 45-370
Cow position:
Alignm length: 343
Alignm identity: 230
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 44

Conread position: 45-477
Cow position:
Alignm length: 442
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 18

Conread position: 49-477
Cow position:
Alignm length: 446
Alignm identity: 308
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 47, 20

Conread position: 50-207
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 50-473
Cow position:
Alignm length: 442
Alignm identity: 302
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 116, 5

Conread position: 51-422
Cow position:
Alignm length: 387
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 81

Conread position: 52-275
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 89, 53

Conread position: 52-477
Cow position:
Alignm length: 449
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 18

Conread position: 56-439
Cow position:
Alignm length: 397
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 236

Conread position: 60-391
Cow position:
Alignm length: 347
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 233

Conread position: 60-459
Cow position:
Alignm length: 418
Alignm identity: 286
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 90, 25

Conread position: 62-431
Cow position:
Alignm length: 388
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 31

Conread position: 64-372
Cow position:
Alignm length: 323
Alignm identity: 233
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 74, 23

Conread position: 64-438
Cow position:
Alignm length: 387
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 98

Conread position: 65-315
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 73, 0

Conread position: 66-284
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 68, 26

Conread position: 66-315
Cow position:
Alignm length: 261
Alignm identity: 183
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 69, 206

Conread position: 66-315
Cow position:
Alignm length: 264
Alignm identity: 181
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 69, 21

Conread position: 67-391
Cow position:
Alignm length: 339
Alignm identity: 232
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 76, 211

Conread position: 67-421
Cow position:
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 30

Conread position: 67-477
Cow position:
Alignm length: 430
Alignm identity: 297
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 18, 113

Conread position: 68-469
Cow position:
Alignm length: 406
Alignm identity: 267
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 120, 19

Conread position: 70-432
Cow position:
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 22

Conread position: 72-312
Cow position:
Alignm length: 260
Alignm identity: 181
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 97, 20

Conread position: 75-211
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 75-282
Cow position:
Alignm length: 218
Alignm identity: 165
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 12, 40

Conread position: 75-310
Cow position:
Alignm length: 238
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 26

Conread position: 75-423
Cow position:
Alignm length: 369
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 219

Conread position: 75-477
Cow position:
Alignm length: 410
Alignm identity: 282
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 75, 23

Conread position: 76-315
Cow position:
Alignm length: 248
Alignm identity: 175
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 133, 51

Conread position: 76-318
Cow position:
Alignm length: 250
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 16

Conread position: 76-399
Cow position:
Alignm length: 333
Alignm identity: 232
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 64, 15

Conread position: 76-473
Cow position:
Alignm length: 412
Alignm identity: 275
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 74, 22

Conread position: 77-314
Cow position:
Alignm length: 247
Alignm identity: 172
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 16

Conread position: 77-477
Cow position:
Alignm length: 427
Alignm identity: 296
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 65, 21

Conread position: 77-477
Cow position:
Alignm length: 419
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 22

Conread position: 77-477
Cow position:
Alignm length: 417
Alignm identity: 274
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 22

Conread position: 78-423
Cow position:
Alignm length: 375
Alignm identity: 261
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 9, 0

Conread position: 79-477
Cow position:
Alignm length: 413
Alignm identity: 282
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 132, 208

Conread position: 80-477
Cow position:
Alignm length: 413
Alignm identity: 282
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 35, 18

Conread position: 81-477
Cow position:
Alignm length: 412
Alignm identity: 275
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 155, 55

Conread position: 82-384
Cow position:
Alignm length: 324
Alignm identity: 225
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 5, 0

Conread position: 83-312
Cow position:
Alignm length: 238
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 167

Conread position: 83-420
Cow position:
Alignm length: 351
Alignm identity: 242
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 58, 16

Conread position: 83-430
Cow position:
Alignm length: 370
Alignm identity: 253
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 58, 27

Conread position: 83-477
Cow position:
Alignm length: 419
Alignm identity: 278
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 117

Conread position: 87-421
Cow position:
Alignm length: 346
Alignm identity: 237
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 177, 51

Conread position: 89-430
Cow position:
Alignm length: 357
Alignm identity: 252
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 205

Conread position: 90-212
Cow position:
Alignm length: 130
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 90-477
Cow position:
Alignm length: 397
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 64

Conread position: 91-363
Cow position:
Alignm length: 290
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 205

Conread position: 91-419
Cow position:
Alignm length: 352
Alignm identity: 239
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 201

Conread position: 91-479
Cow position:
Alignm length: 402
Alignm identity: 280
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 104, 19

Conread position: 92-283
Cow position:
Alignm length: 195
Alignm identity: 144
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 60, 90

Conread position: 92-433
Cow position:
Alignm length: 356
Alignm identity: 252
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 126, 43

Conread position: 92-477
Cow position:
Alignm length: 409
Alignm identity: 274
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 103, 80

Conread position: 94-477
Cow position:
Alignm length: 402
Alignm identity: 279
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 120, 184

Conread position: 98-315
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 16, 10

Conread position: 103-263
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 108, 31

Conread position: 103-477
Cow position:
Alignm length: 390
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 184

Conread position: 109-359
Cow position:
Alignm length: 256
Alignm identity: 169
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 112, 56

Conread position: 115-477
Cow position:
Alignm length: 377
Alignm identity: 248
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 23, 110

Conread position: 137-279
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 76, 101

Conread position: 156-477
Cow position:
Alignm length: 327
Alignm identity: 213
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 155, 9

Conread position: 236-477
Cow position:
Alignm length: 247
Alignm identity: 178
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 75, 9

Conread position: 238-477
Cow position:
Alignm length: 250
Alignm identity: 181
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 43, 80

Conread position: 280-477
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 155

Conread position: 314-477
Cow position:
Alignm length: 168
Alignm identity: 132
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 71, 115

Conread position: 314-477
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 109

Conread position: 315-477
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 11

Conread position: 319-476
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 65, 112

Conread position: 322-477
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 108

Conread position: 324-477
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 326-477
Cow position:
Alignm length: 156
Alignm identity: 124
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 103

Conread position: 379-477
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Show alignments to all cow chromosomes.