Cow genome map
| Conread name: | Pig1-117N15 |
| Conread position: | 34-164 |
| Cow position: | chr26:6299177-6299042 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-477 |
| Cow position: | chr26:16796191-16796629 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 9, 75 |
| Conread position: | 40-172 |
| Cow position: | chr26:17155290-17155425 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 40-261 |
| Cow position: | chr26:19110944-19110708 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 41, 29 |
| Conread position: | 40-298 |
| Cow position: | chr26:19774268-19774531 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 40-315 |
| Cow position: | chr26:8811158-8810887 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 40-477 |
| Cow position: | chr26:6475396-6475841 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 248 |
| Conread position: | 40-477 |
| Cow position: | chr26:18692452-18692016 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 43 |
| Conread position: | 41-211 |
| Cow position: | chr26:27585806-27585634 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 42, 11 |
| Conread position: | 41-217 |
| Cow position: | chr26:22249447-22249624 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 102, 50 |
| Conread position: | 41-251 |
| Cow position: | chr26:3019384-3019612 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 41-279 |
| Cow position: | chr26:17289237-17288994 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 28 |
| Conread position: | 41-300 |
| Cow position: | chr26:9666376-9666637 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 43, 248 |
| Conread position: | 41-301 |
| Cow position: | chr26:20129640-20129906 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 252 |
| Conread position: | 41-306 |
| Cow position: | chr26:4747826-4748093 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 100, 14 |
| Conread position: | 41-310 |
| Cow position: | chr26:10767882-10768140 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 100, 46 |
| Conread position: | 41-311 |
| Cow position: | chr26:12669230-12668959 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 91 |
| Conread position: | 41-312 |
| Cow position: | chr26:14080737-14080475 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 64 |
| Conread position: | 41-476 |
| Cow position: | chr26:29353477-29353935 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 46 |
| Conread position: | 41-477 |
| Cow position: | chr26:9064371-9063929 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 8 |
| Conread position: | 42-312 |
| Cow position: | chr26:7103010-7103279 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 13 |
| Conread position: | 42-468 |
| Cow position: | chr26:2389024-2389464 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 23 |
| Conread position: | 42-477 |
| Cow position: | chr26:9632339-9632746 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 124 |
| Conread position: | 43-238 |
| Cow position: | chr26:30605329-30605534 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 43-241 |
| Cow position: | chr26:14924514-14924311 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 42, 199 |
| Conread position: | 43-311 |
| Cow position: | chr26:2769810-2770077 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 204 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 43-477 |
| Cow position: | chr26:782902-783347 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 66 |
| Conread position: | 44-312 |
| Cow position: | chr26:33745950-33745671 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 242 |
| Conread position: | 49-477 |
| Cow position: | chr26:31794797-31794366 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 62 |
| Conread position: | 52-418 |
| Cow position: | chr26:22161842-22162225 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 131 |
| Conread position: | 55-197 |
| Cow position: | chr26:33194663-33194521 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 83, 106 |
| Conread position: | 55-284 |
| Cow position: | chr26:21992118-21991895 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 86, 32 |
| Conread position: | 56-477 |
| Cow position: | chr26:21351707-21351289 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 38 |
| Conread position: | 57-231 |
| Cow position: | chr26:19178633-19178456 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 34, 12 |
| Conread position: | 58-284 |
| Cow position: | chr26:28760078-28760303 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 143, 80 |
| Conread position: | 58-477 |
| Cow position: | chr26:23272800-23272373 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 234 |
| Conread position: | 60-247 |
| Cow position: | chr26:21921630-21921813 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 146, 32 |
| Conread position: | 63-371 |
| Cow position: | chr26:5685457-5685130 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 78, 7 |
| Conread position: | 65-192 |
| Cow position: | chr26:22975279-22975153 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 21 |
| Conread position: | 65-430 |
| Cow position: | chr26:3071962-3072336 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 100, 7 |
| Conread position: | 65-477 |
| Cow position: | chr26:7525468-7525881 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 66 |
| Conread position: | 68-228 |
| Cow position: | chr26:23315774-23315614 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 72, 12 |
| Conread position: | 72-267 |
| Cow position: | chr26:33567046-33567243 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 16 |
| Conread position: | 76-260 |
| Cow position: | chr26:19446123-19445944 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 25, 139 |
| Conread position: | 76-275 |
| Cow position: | chr26:33227809-33227598 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 77-262 |
| Cow position: | chr26:31605403-31605212 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 86-383 |
| Cow position: | chr26:13021158-13021469 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 87-315 |
| Cow position: | chr26:32659466-32659696 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 138 |
| Conread position: | 89-391 |
| Cow position: | chr26:27594616-27594328 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 59, 158 |
| Conread position: | 90-312 |
| Cow position: | chr26:6828153-6827924 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 46, 204 |
| Conread position: | 90-350 |
| Cow position: | chr26:8277583-8277858 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 210 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 53, 86 |
| Conread position: | 90-477 |
| Cow position: | chr26:8034849-8034449 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 51, 93 |
| Conread position: | 90-477 |
| Cow position: | chr26:12155134-12155522 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 278 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 15, 20 |
| Conread position: | 91-306 |
| Cow position: | chr26:17675751-17675966 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 50, 25 |
| Conread position: | 91-414 |
| Cow position: | chr26:32955650-32955974 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 122, 47 |
| Conread position: | 91-423 |
| Cow position: | chr26:9867135-9867493 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 91-477 |
| Cow position: | chr26:12807533-12807923 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 280 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 60, 182 |
| Conread position: | 92-423 |
| Cow position: | chr26:16549966-16549640 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 49, 197 |
| Conread position: | 94-312 |
| Cow position: | chr26:19769105-19769327 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 44, 63 |
| Conread position: | 95-473 |
| Cow position: | chr26:19537475-19537091 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 120, 21 |
| Conread position: | 98-365 |
| Cow position: | chr26:27491525-27491803 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 6, 204 |
| Conread position: | 99-312 |
| Cow position: | chr26:32897897-32898113 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 52, 191 |
| Conread position: | 103-315 |
| Cow position: | chr26:8745862-8746080 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 110, 62 |
| Conread position: | 103-376 |
| Cow position: | chr26:33475640-33475359 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 95, 54 |
| Conread position: | 103-432 |
| Cow position: | chr26:7961602-7961260 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 239 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 38, 334 |
| Conread position: | 103-473 |
| Cow position: | chr26:3921782-3922154 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 106-477 |
| Cow position: | chr26:6323632-6323254 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 184 |
| Conread position: | 112-275 |
| Cow position: | chr26:21339787-21339616 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 143-477 |
| Cow position: | chr26:12125389-12125740 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 133, 41 |
| Conread position: | 179-477 |
| Cow position: | chr26:8651692-8651999 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 135, 56 |
| Conread position: | 215-477 |
| Cow position: | chr26:1613457-1613717 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 91, 24 |
| Conread position: | 238-477 |
| Cow position: | chr26:31462702-31462472 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 67, 48 |
| Conread position: | 317-477 |
| Cow position: | chr26:20130329-20130490 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 68, 112 |
Show alignments to all cow chromosomes.