Cow genome map

Conread name: Pig1-117N15

Conread position: 30-312
Cow position: chr3:82075058-82075330 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 40

Conread position: 31-234
Cow position: chr3:2198882-2198675 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 107, 48

Conread position: 34-285
Cow position: chr3:52650532-52650791 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 106, 0

Conread position: 34-312
Cow position: chr3:58174905-58174629 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 201
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 107, 191

Conread position: 34-475
Cow position: chr3:31907143-31907611 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 74

Conread position: 35-300
Cow position: chr3:74611563-74611292 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 253

Conread position: 35-311
Cow position: chr3:26493235-26493505 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 83, 66

Conread position: 35-312
Cow position: chr3:74699387-74699677 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 216
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 49, 85

Conread position: 35-477
Cow position: chr3:68342253-68342708 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 75

Conread position: 36-206
Cow position: chr3:18107238-18107067 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 105, 164

Conread position: 37-315
Cow position: chr3:19789121-19789404 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 195
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 13, 19

Conread position: 38-306
Cow position: chr3:45744694-45744437 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 46, 95

Conread position: 39-289
Cow position: chr3:73590003-73590260 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 174
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 11, 17

Conread position: 39-300
Cow position: chr3:79376263-79376005 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 46, 148

Conread position: 39-364
Cow position: chr3:4223299-4222979 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 46

Conread position: 40-260
Cow position: chr3:61009444-61009669 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 28

Conread position: 40-284
Cow position: chr3:30008918-30009167 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 101

Conread position: 40-302
Cow position: chr3:29596380-29596121 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 26, 64

Conread position: 40-316
Cow position: chr3:59206233-59205955 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 98, 30

Conread position: 40-375
Cow position: chr3:65058691-65058355 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 245
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 6, 47

Conread position: 40-399
Cow position: chr3:49460936-49461316 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 263
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 26, 55

Conread position: 40-405
Cow position: chr3:53592699-53593084 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 259
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 39, 244

Conread position: 40-423
Cow position: chr3:48241608-48241219 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 32

Conread position: 40-475
Cow position: chr3:33327699-33327238 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 399

Conread position: 40-477
Cow position: chr3:15954095-15954524 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 307
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 26, 46

Conread position: 40-477
Cow position: chr3:58350570-58350129 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 28

Conread position: 40-477
Cow position: chr3:61539796-61539349 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 33

Conread position: 40-477
Cow position: chr3:67929270-67929719 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 319
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 111, 46

Conread position: 41-151
Cow position: chr3:36125584-36125695 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 31

Conread position: 41-183
Cow position: chr3:51492774-51492629 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 15

Conread position: 41-184
Cow position: chr3:25250897-25250755 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 97, 19

Conread position: 41-187
Cow position: chr3:20878895-20879039 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 41-201
Cow position: chr3:28478082-28477918 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 41-208
Cow position: chr3:78647495-78647327 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 97, 31

Conread position: 41-212
Cow position: chr3:3736288-3736107 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 41-212
Cow position: chr3:4082108-4082276 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 97, 39

Conread position: 41-242
Cow position: chr3:74205815-74206020 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 185

Conread position: 41-252
Cow position: chr3:61913580-61913375 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 97, 19

Conread position: 41-260
Cow position: chr3:71135781-71135555 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 100, 50

Conread position: 41-275
Cow position: chr3:55991875-55992120 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 190
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 94, 150

Conread position: 41-280
Cow position: chr3:18216776-18217018 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 183
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 24, 100

Conread position: 41-283
Cow position: chr3:41718386-41718132 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 196
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 40, 127

Conread position: 41-284
Cow position: chr3:20092532-20092762 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 22, 17

Conread position: 41-285
Cow position: chr3:42480608-42480361 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 51

Conread position: 41-289
Cow position: chr3:8393928-8393678 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 97, 150

Conread position: 41-289
Cow position: chr3:14625401-14625650 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 97, 53

Conread position: 41-295
Cow position: chr3:80084187-80084445 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 11

Conread position: 41-301
Cow position: chr3:84000602-84000341 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 96, 44

Conread position: 41-310
Cow position: chr3:55124291-55124558 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 50, 98

Conread position: 41-311
Cow position: chr3:22171180-22170908 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 248

Conread position: 41-311
Cow position: chr3:52835894-52836183 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 255

Conread position: 41-312
Cow position: chr3:18458669-18458938 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 172, 53

Conread position: 41-312
Cow position: chr3:23091986-23092270 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 41-312
Cow position: chr3:37452062-37451787 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 39

Conread position: 41-312
Cow position: chr3:42594663-42594938 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 66

Conread position: 41-312
Cow position: chr3:54862423-54862706 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 258

Conread position: 41-312
Cow position: chr3:56637654-56637384 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 206
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 97, 44

Conread position: 41-312
Cow position: chr3:58130985-58130718 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 42, 88

Conread position: 41-312
Cow position: chr3:62884197-62883920 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 134

Conread position: 41-312
Cow position: chr3:77225108-77224838 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 200
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 44, 117

Conread position: 41-342
Cow position: chr3:48629600-48629898 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 42, 150

Conread position: 41-383
Cow position: chr3:60597533-60597195 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 236
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 123, 163

Conread position: 41-408
Cow position: chr3:50462330-50461952 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 51

Conread position: 41-423
Cow position: chr3:46350663-46350239 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 282
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 9, 15

Conread position: 41-423
Cow position: chr3:59000763-59001143 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 51

Conread position: 41-430
Cow position: chr3:15051959-15052339 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 256
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 15

Conread position: 41-430
Cow position: chr3:23169075-23169481 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 14

Conread position: 41-433
Cow position: chr3:61840268-61839878 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 280
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 15

Conread position: 41-458
Cow position: chr3:51146677-51147100 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 11

Conread position: 41-469
Cow position: chr3:42563446-42563009 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 72

Conread position: 41-472
Cow position: chr3:42489312-42489764 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 311
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 40, 228

Conread position: 41-476
Cow position: chr3:29807456-29807017 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 310
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 26, 53

Conread position: 41-476
Cow position: chr3:58865479-58865930 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 50

Conread position: 41-477
Cow position: chr3:15684932-15685354 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 79

Conread position: 41-477
Cow position: chr3:37186816-37186388 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 43

Conread position: 41-477
Cow position: chr3:51255777-51255313 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 9

Conread position: 41-477
Cow position: chr3:53091480-53091064 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 301
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 333, 39

Conread position: 41-477
Cow position: chr3:53588394-53588847 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 30

Conread position: 41-478
Cow position: chr3:75479992-75479570 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 297
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 30, 35

Conread position: 42-210
Cow position: chr3:61322833-61322669 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 42-251
Cow position: chr3:56711651-56711859 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 51, 179

Conread position: 42-284
Cow position: chr3:22820560-22820312 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 164
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 42-284
Cow position: chr3:68262752-68262523 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 144, 36

Conread position: 42-311
Cow position: chr3:63147162-63147425 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 12, 95

Conread position: 42-312
Cow position: chr3:5097195-5096921 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 99, 45

Conread position: 42-312
Cow position: chr3:34038200-34038470 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 9, 19

Conread position: 42-338
Cow position: chr3:78530525-78530228 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 49, 114

Conread position: 42-473
Cow position: chr3:12255469-12255030 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 42-476
Cow position: chr3:50347953-50347547 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 303
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 97, 36

Conread position: 42-477
Cow position: chr3:5419871-5420323 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 135

Conread position: 42-477
Cow position: chr3:8753448-8753009 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 316
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 59, 30

Conread position: 42-477
Cow position: chr3:9843575-9843126 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 51

Conread position: 42-477
Cow position: chr3:49337714-49337261 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 28

Conread position: 42-477
Cow position: chr3:54434965-54434525 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 112

Conread position: 42-477
Cow position: chr3:83442666-83443090 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 302
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 43, 18

Conread position: 43-281
Cow position: chr3:27785257-27785022 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 154, 56

Conread position: 43-295
Cow position: chr3:7365901-7366142 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 175, 41

Conread position: 43-306
Cow position: chr3:56703863-56704130 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 43, 115

Conread position: 43-312
Cow position: chr3:36100826-36100546 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 41, 250

Conread position: 43-373
Cow position: chr3:66708079-66708421 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 264

Conread position: 43-412
Cow position: chr3:42584530-42584139 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 270
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 115, 95

Conread position: 43-483
Cow position: chr3:53538506-53538060 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 16

Conread position: 44-212
Cow position: chr3:55778024-55777856 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 120

Conread position: 44-286
Cow position: chr3:60854849-60855099 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 26

Conread position: 45-260
Cow position: chr3:67930196-67930411 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 11, 50

Conread position: 47-210
Cow position: chr3:27634028-27634193 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 129

Conread position: 47-280
Cow position: chr3:47524521-47524760 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 20, 39

Conread position: 48-312
Cow position: chr3:63203411-63203163 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 93, 31

Conread position: 50-475
Cow position: chr3:43657725-43658165 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 111

Conread position: 51-209
Cow position: chr3:50281772-50281936 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 17

Conread position: 51-283
Cow position: chr3:55445340-55445108 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 21

Conread position: 51-284
Cow position: chr3:8061102-8060875 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 90, 17

Conread position: 51-315
Cow position: chr3:52722030-52722282 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 162, 87

Conread position: 51-421
Cow position: chr3:7566444-7566815 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 262
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 162, 17

Conread position: 51-477
Cow position: chr3:23945081-23944668 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 125

Conread position: 51-477
Cow position: chr3:42461679-42461239 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 52-284
Cow position: chr3:8924026-8923786 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 89, 110

Conread position: 52-312
Cow position: chr3:81473992-81473722 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 41, 145

Conread position: 54-315
Cow position: chr3:67704522-67704255 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 239

Conread position: 55-312
Cow position: chr3:39171505-39171766 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 40

Conread position: 55-312
Cow position: chr3:78945856-78946121 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 83

Conread position: 55-329
Cow position: chr3:66292201-66292479 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 54

Conread position: 55-383
Cow position: chr3:28908228-28908562 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 221
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 256, 37

Conread position: 55-477
Cow position: chr3:38497916-38497487 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 5

Conread position: 56-339
Cow position: chr3:34315980-34316267 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 241

Conread position: 57-212
Cow position: chr3:2810267-2810425 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 135

Conread position: 57-312
Cow position: chr3:32870124-32869867 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 232

Conread position: 60-442
Cow position: chr3:46094805-46094404 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 281
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 81, 25

Conread position: 60-476
Cow position: chr3:66738745-66738319 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 72

Conread position: 60-477
Cow position: chr3:26553741-26554170 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 102

Conread position: 61-430
Cow position: chr3:59799214-59798843 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 270
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 79, 9

Conread position: 62-312
Cow position: chr3:19006631-19006385 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 18, 74

Conread position: 62-315
Cow position: chr3:65581048-65581301 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 107, 8

Conread position: 63-477
Cow position: chr3:4050163-4049754 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 289
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 87, 29

Conread position: 64-232
Cow position: chr3:12576331-12576505 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 22, 142

Conread position: 64-468
Cow position: chr3:36174099-36174520 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 227

Conread position: 64-477
Cow position: chr3:76188651-76188243 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 27

Conread position: 65-413
Cow position: chr3:17695038-17695396 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 27

Conread position: 66-319
Cow position: chr3:8457621-8457369 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 147, 84

Conread position: 66-477
Cow position: chr3:15655181-15655600 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 22

Conread position: 67-310
Cow position: chr3:75158325-75158085 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 74, 149

Conread position: 67-342
Cow position: chr3:82657121-82657403 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 195
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 81, 26

Conread position: 67-421
Cow position: chr3:14465748-14466105 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 253
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 6, 26

Conread position: 67-439
Cow position: chr3:19717126-19717502 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 263
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 131, 71

Conread position: 68-317
Cow position: chr3:77365333-77365581 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 7

Conread position: 68-391
Cow position: chr3:48211453-48211141 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 70, 37

Conread position: 71-315
Cow position: chr3:23111542-23111789 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 20, 75

Conread position: 71-477
Cow position: chr3:80053578-80053987 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 21

Conread position: 72-368
Cow position: chr3:3457880-3457565 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 62, 0

Conread position: 75-201
Cow position: chr3:48375052-48374923 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 88

Conread position: 75-217
Cow position: chr3:70609580-70609440 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 75-289
Cow position: chr3:4087206-4087429 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 75-308
Cow position: chr3:32399297-32399533 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 61, 121

Conread position: 75-328
Cow position: chr3:51228129-51227858 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 132

Conread position: 75-477
Cow position: chr3:82474018-82473591 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 370

Conread position: 76-212
Cow position: chr3:18757819-18757954 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 76-247
Cow position: chr3:63039088-63038916 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 102

Conread position: 76-277
Cow position: chr3:15752681-15752878 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 142, 11

Conread position: 76-283
Cow position: chr3:68627730-68627931 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 76-285
Cow position: chr3:74409439-74409233 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 62, 122

Conread position: 76-477
Cow position: chr3:48296666-48296257 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 33

Conread position: 76-477
Cow position: chr3:61190970-61191364 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 267
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 138, 23

Conread position: 77-310
Cow position: chr3:11949398-11949633 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 46

Conread position: 77-338
Cow position: chr3:53790582-53790858 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 66, 10

Conread position: 77-477
Cow position: chr3:42603785-42603374 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 20

Conread position: 78-250
Cow position: chr3:60265285-60265459 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 137

Conread position: 78-262
Cow position: chr3:27274483-27274298 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 135, 20

Conread position: 78-365
Cow position: chr3:22953904-22954190 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 131, 67

Conread position: 78-377
Cow position: chr3:12324029-12323715 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 220
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 58, 176

Conread position: 78-473
Cow position: chr3:2630749-2630351 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 279
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 73, 145

Conread position: 79-212
Cow position: chr3:25079697-25079565 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 62, 33

Conread position: 79-477
Cow position: chr3:49218359-49218756 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 146

Conread position: 80-430
Cow position: chr3:15057656-15058020 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 255
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 237, 111

Conread position: 81-212
Cow position: chr3:8790639-8790772 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 117
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 58, 0

Conread position: 81-289
Cow position: chr3:63237808-63238005 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 17, 0

Conread position: 81-312
Cow position: chr3:25691704-25691467 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 12

Conread position: 81-477
Cow position: chr3:58540576-58540987 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 279
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 69, 11

Conread position: 81-477
Cow position: chr3:77188388-77188002 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 270
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 38, 18

Conread position: 82-416
Cow position: chr3:80581617-80581281 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 117

Conread position: 82-423
Cow position: chr3:71231350-71231003 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 117

Conread position: 82-477
Cow position: chr3:40231865-40231481 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 275
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 232, 11

Conread position: 83-314
Cow position: chr3:20437702-20437929 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 55, 91

Conread position: 83-358
Cow position: chr3:78077139-78076858 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 128, 54

Conread position: 84-310
Cow position: chr3:73777233-73776998 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 181
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 51, 188

Conread position: 85-310
Cow position: chr3:57764176-57763943 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 210

Conread position: 87-312
Cow position: chr3:15158988-15158759 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 204

Conread position: 87-430
Cow position: chr3:2506530-2506890 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 88-303
Cow position: chr3:53509740-53509960 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 61, 80

Conread position: 88-477
Cow position: chr3:66978781-66978386 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 49

Conread position: 89-315
Cow position: chr3:4031914-4031683 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 52, 203

Conread position: 90-212
Cow position: chr3:83396139-83396015 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 90-315
Cow position: chr3:66116168-66116397 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 51, 201

Conread position: 90-328
Cow position: chr3:3063679-3063457 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 202, 41

Conread position: 91-267
Cow position: chr3:44932454-44932268 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 91-303
Cow position: chr3:54946070-54945852 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 52, 189

Conread position: 91-311
Cow position: chr3:17742446-17742228 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 127, 40

Conread position: 91-378
Cow position: chr3:17222204-17222504 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 51, 38

Conread position: 91-425
Cow position: chr3:55189815-55190145 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 231
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 60, 124

Conread position: 91-430
Cow position: chr3:70565796-70566149 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 252
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 47, 58

Conread position: 91-477
Cow position: chr3:23476944-23476554 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 205

Conread position: 91-477
Cow position: chr3:26219110-26219508 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 276
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 106, 203

Conread position: 92-285
Cow position: chr3:52652141-52652332 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 109, 54

Conread position: 92-330
Cow position: chr3:70401842-70401597 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 77

Conread position: 92-398
Cow position: chr3:13353302-13352982 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 215
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 210

Conread position: 92-416
Cow position: chr3:13899505-13899850 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 246
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 58, 205

Conread position: 92-422
Cow position: chr3:42178099-42177754 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 51, 185

Conread position: 92-439
Cow position: chr3:68586961-68586626 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 58, 73

Conread position: 92-475
Cow position: chr3:65969102-65968709 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 275
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 51, 204

Conread position: 92-477
Cow position: chr3:27544392-27544787 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 78

Conread position: 93-306
Cow position: chr3:16809845-16810067 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 48, 203

Conread position: 93-310
Cow position: chr3:17284785-17284556 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 179
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 47, 87

Conread position: 93-310
Cow position: chr3:67744687-67744908 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 120, 45

Conread position: 93-311
Cow position: chr3:32596987-32597209 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 198

Conread position: 93-475
Cow position: chr3:33632952-33633322 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 82

Conread position: 93-477
Cow position: chr3:27867761-27867374 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 261
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 48, 65

Conread position: 93-477
Cow position: chr3:74561470-74561850 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 99

Conread position: 94-284
Cow position: chr3:48433889-48433688 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 94-341
Cow position: chr3:53113112-53112851 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 201

Conread position: 95-315
Cow position: chr3:56059745-56059522 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 182

Conread position: 95-477
Cow position: chr3:81371584-81371208 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 272
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 11, 127

Conread position: 98-413
Cow position: chr3:8717187-8716854 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 234
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 176

Conread position: 98-477
Cow position: chr3:14626222-14626604 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 119

Conread position: 99-234
Cow position: chr3:15977103-15976961 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 99-350
Cow position: chr3:83921131-83920875 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 65, 39

Conread position: 99-477
Cow position: chr3:72391019-72390635 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 273
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 44, 198

Conread position: 100-283
Cow position: chr3:23270031-23269846 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 120

Conread position: 100-302
Cow position: chr3:70899827-70899628 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 41, 102

Conread position: 100-447
Cow position: chr3:6853572-6853931 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 249
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 41, 104

Conread position: 101-476
Cow position: chr3:70129879-70130271 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 284
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 37, 67

Conread position: 102-477
Cow position: chr3:58383897-58383514 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 268
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 31, 45

Conread position: 103-380
Cow position: chr3:53150258-53149970 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 47, 84

Conread position: 103-423
Cow position: chr3:50768612-50768272 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 48, 186

Conread position: 105-400
Cow position: chr3:65771380-65771691 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 223
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 30, 0

Conread position: 107-312
Cow position: chr3:55815264-55815062 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 32, 58

Conread position: 107-477
Cow position: chr3:70913151-70913541 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 333

Conread position: 108-477
Cow position: chr3:64536626-64536997 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 64

Conread position: 111-263
Cow position: chr3:4861609-4861453 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 36

Conread position: 125-477
Cow position: chr3:78546189-78546549 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 12

Conread position: 155-476
Cow position: chr3:27453522-27453842 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 239
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 63, 125

Conread position: 157-473
Cow position: chr3:6799137-6799455 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 157, 16

Conread position: 158-477
Cow position: chr3:24639466-24639129 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 12, 137

Conread position: 159-477
Cow position: chr3:19109608-19109285 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 226
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 54, 114

Conread position: 177-477
Cow position: chr3:45183994-45184287 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 46, 96

Conread position: 180-477
Cow position: chr3:22354005-22353682 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 34, 102

Conread position: 237-477
Cow position: chr3:17899610-17899370 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 193
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 86, 49

Conread position: 241-477
Cow position: chr3:20780097-20780330 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 144, 57

Conread position: 297-477
Cow position: chr3:8752440-8752258 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 9, 133

Conread position: 310-477
Cow position: chr3:32869835-32869664 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 75, 120

Conread position: 310-477
Cow position: chr3:73936311-73936481 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 140
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 74, 125

Conread position: 314-476
Cow position: chr3:25090605-25090443 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 71, 41

Conread position: 314-477
Cow position: chr3:78646975-78646808 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 71, 115

Conread position: 314-484
Cow position: chr3:46332770-46332943 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 40

Conread position: 315-477
Cow position: chr3:62883686-62883525 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 114

Conread position: 315-477
Cow position: chr3:64318611-64318446 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 62, 93

Conread position: 317-477
Cow position: chr3:43425008-43424851 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 67, 29

Conread position: 319-477
Cow position: chr3:26659634-26659795 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 54

Conread position: 319-477
Cow position: chr3:82075383-82075547 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 133
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 63, 0

Conread position: 324-477
Cow position: chr3:49428779-49428934 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 43, 105

Show alignments to all cow chromosomes.