Cow genome map

Conread name: Pig1-118L19

Conread position: 1-120
Cow position: chr1:19545267-19545143 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 1-176
Cow position: chr1:56657871-56658045 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 146, 11

Conread position: 1-177
Cow position: chr1:11873524-11873348 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 25

Conread position: 1-183
Cow position: chr1:5409781-5409596 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 144

Conread position: 1-185
Cow position: chr1:15311701-15311884 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 24, 85

Conread position: 1-186
Cow position: chr1:61725280-61725092 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 125

Conread position: 1-188
Cow position: chr1:78783379-78783572 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 105

Conread position: 1-193
Cow position: chr1:3243771-3243965 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 59, 131

Conread position: 1-198
Cow position: chr1:3752109-3751904 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 1-200
Cow position: chr1:47008863-47009069 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 21, 132

Conread position: 1-202
Cow position: chr1:3244686-3244889 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 30, 76

Conread position: 1-203
Cow position: chr1:10519206-10519000 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 187

Conread position: 1-203
Cow position: chr1:22448754-22448542 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 29, 0

Conread position: 1-203
Cow position: chr1:31235099-31234892 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 121

Conread position: 1-203
Cow position: chr1:73561817-73561608 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 25, 106

Conread position: 1-206
Cow position: chr1:44164911-44165128 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 1-207
Cow position: chr1:82443624-82443411 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 1-208
Cow position: chr1:22745459-22745671 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 145
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 63, 48

Conread position: 1-208
Cow position: chr1:43380195-43379980 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 83

Conread position: 1-211
Cow position: chr1:57396094-57395889 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 25

Conread position: 1-212
Cow position: chr1:99136598-99136382 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 25, 150

Conread position: 1-218
Cow position: chr1:98372461-98372686 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 110

Conread position: 1-222
Cow position: chr1:30413420-30413649 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 84

Conread position: 1-223
Cow position: chr1:68217526-68217302 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 30, 86

Conread position: 1-238
Cow position: chr1:51654243-51654498 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 23, 0

Conread position: 1-238
Cow position: chr1:79278613-79278373 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 55, 212

Conread position: 1-241
Cow position: chr1:44769279-44769032 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 55, 180

Conread position: 1-242
Cow position: chr1:55135666-55135914 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 25, 81

Conread position: 1-243
Cow position: chr1:6788457-6788204 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 22, 0

Conread position: 1-245
Cow position: chr1:73584570-73584329 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 166
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 25, 67

Conread position: 1-247
Cow position: chr1:85596776-85597021 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 178

Conread position: 1-248
Cow position: chr1:26729560-26729797 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 56, 25

Conread position: 1-260
Cow position: chr1:84906235-84905967 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 174
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 1-263
Cow position: chr1:95178788-95179053 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 26

Conread position: 1-264
Cow position: chr1:8869827-8869560 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 24, 68

Conread position: 1-268
Cow position: chr1:56634931-56635202 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 58, 165

Conread position: 1-269
Cow position: chr1:45289041-45288766 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-270
Cow position: chr1:12222772-12222502 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 180
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 145

Conread position: 1-271
Cow position: chr1:80899940-80900226 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 192
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 145

Conread position: 1-272
Cow position: chr1:81355871-81355595 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 31, 25

Conread position: 1-273
Cow position: chr1:20581781-20582050 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 68

Conread position: 1-274
Cow position: chr1:21577637-21577919 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 190
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 25, 136

Conread position: 1-274
Cow position: chr1:39510218-39509948 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 11, 70

Conread position: 1-274
Cow position: chr1:91039344-91039064 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 187
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 136

Conread position: 1-275
Cow position: chr1:82884557-82884284 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 135

Conread position: 1-277
Cow position: chr1:86113581-86113287 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 181

Conread position: 1-278
Cow position: chr1:37309678-37309405 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 204
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 55, 25

Conread position: 1-278
Cow position: chr1:41056516-41056792 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 25, 106

Conread position: 1-280
Cow position: chr1:96964153-96964432 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 131

Conread position: 1-281
Cow position: chr1:24876098-24876379 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 24, 86

Conread position: 1-282
Cow position: chr1:77880898-77880617 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 55, 25

Conread position: 1-282
Cow position: chr1:87072537-87072813 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 25, 65

Conread position: 1-283
Cow position: chr1:8455-8734 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 59, 97

Conread position: 1-283
Cow position: chr1:28563736-28563450 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 208
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 25, 105

Conread position: 1-283
Cow position: chr1:48105601-48105317 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 182

Conread position: 1-283
Cow position: chr1:48580964-48581247 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 56, 141

Conread position: 1-283
Cow position: chr1:55357453-55357176 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 142

Conread position: 1-283
Cow position: chr1:75744693-75744981 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 25, 135

Conread position: 1-283
Cow position: chr1:78809716-78809995 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 50, 25

Conread position: 1-283
Cow position: chr1:79844301-79844584 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 60, 22

Conread position: 1-283
Cow position: chr1:80988179-80988465 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 212

Conread position: 1-283
Cow position: chr1:89443644-89443360 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 185
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 26, 70

Conread position: 1-283
Cow position: chr1:95056888-95057164 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 23, 120

Conread position: 1-283
Cow position: chr1:101701814-101701528 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 189
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 104

Conread position: 1-284
Cow position: chr1:73196398-73196109 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 25, 69

Conread position: 1-285
Cow position: chr1:31348608-31348316 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 25, 136

Conread position: 1-285
Cow position: chr1:52039469-52039757 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 212
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 25, 100

Conread position: 1-285
Cow position: chr1:88618426-88618716 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 16, 107

Conread position: 1-286
Cow position: chr1:36931992-36932276 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 22

Conread position: 1-287
Cow position: chr1:75933105-75933389 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 216
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 23, 180

Conread position: 1-287
Cow position: chr1:77133592-77133875 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 94

Conread position: 1-290
Cow position: chr1:71253722-71253431 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 199
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 137

Conread position: 1-291
Cow position: chr1:1956495-1956207 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 25, 70

Conread position: 1-291
Cow position: chr1:13637838-13637536 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 63, 22

Conread position: 1-291
Cow position: chr1:43389215-43388926 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 38

Conread position: 1-291
Cow position: chr1:49839340-49839612 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 141

Conread position: 1-291
Cow position: chr1:57900906-57900596 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 86

Conread position: 1-291
Cow position: chr1:72141397-72141698 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 55, 14

Conread position: 1-291
Cow position: chr1:83747777-83748069 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 206
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 29, 71

Conread position: 1-291
Cow position: chr1:90868606-90868319 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 262

Conread position: 1-291
Cow position: chr1:101632506-101632210 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-307
Cow position: chr1:83583105-83582789 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 20, 112

Conread position: 1-315
Cow position: chr1:56229087-56229393 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 25

Conread position: 1-318
Cow position: chr1:84239274-84238969 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 59, 22

Conread position: 1-320
Cow position: chr1:97611820-97611496 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 227
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 26, 103

Conread position: 1-327
Cow position: chr1:34686027-34686344 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 25, 68

Conread position: 1-330
Cow position: chr1:31414126-31413818 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 29

Conread position: 1-337
Cow position: chr1:99642535-99642184 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 136

Conread position: 1-338
Cow position: chr1:6941298-6941652 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 132

Conread position: 1-338
Cow position: chr1:6958711-6959065 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 132

Conread position: 1-338
Cow position: chr1:16061186-16060822 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 250
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 31, 25

Conread position: 1-338
Cow position: chr1:21954385-21954041 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 65

Conread position: 1-338
Cow position: chr1:83072276-83072628 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 240
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 70

Conread position: 1-338
Cow position: chr1:102349923-102349573 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 17, 215

Conread position: 1-339
Cow position: chr1:71079124-71078775 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 235
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 132

Conread position: 1-340
Cow position: chr1:88911057-88910732 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 219
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 67

Conread position: 1-340
Cow position: chr1:92963231-92963565 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 70

Conread position: 1-343
Cow position: chr1:9534008-9534333 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 25

Conread position: 1-343
Cow position: chr1:15547301-15547656 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 243
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 25, 163

Conread position: 1-343
Cow position: chr1:77720399-77720069 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 247
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 63, 25

Conread position: 1-343
Cow position: chr1:81228507-81228145 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 17, 107

Conread position: 1-346
Cow position: chr1:541640-541969 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 34

Conread position: 1-346
Cow position: chr1:31934343-31934698 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 249
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 24, 136

Conread position: 1-346
Cow position: chr1:42138699-42139033 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 237
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 26, 87

Conread position: 1-346
Cow position: chr1:43352824-43352459 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 25, 193

Conread position: 1-346
Cow position: chr1:51445712-51446076 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 256
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 25, 112

Conread position: 1-346
Cow position: chr1:53039867-53039534 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 227
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 37

Conread position: 1-346
Cow position: chr1:55229817-55230167 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 239
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 25, 98

Conread position: 1-346
Cow position: chr1:63596227-63595857 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 247
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 114

Conread position: 1-346
Cow position: chr1:72035097-72034734 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 260
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 18, 173

Conread position: 1-347
Cow position: chr1:19145089-19144740 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 50

Conread position: 1-348
Cow position: chr1:16767252-16766890 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 247
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 24, 135

Conread position: 1-348
Cow position: chr1:42398364-42398000 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 249
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 25, 135

Conread position: 1-349
Cow position: chr1:12464831-12464468 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 59, 22

Conread position: 1-350
Cow position: chr1:197175-196808 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 244
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 98

Conread position: 1-350
Cow position: chr1:4414375-4414031 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 238
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 185

Conread position: 1-350
Cow position: chr1:10942259-10941900 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 238
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 57, 25

Conread position: 1-350
Cow position: chr1:10964127-10964486 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 241
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 25

Conread position: 1-350
Cow position: chr1:12871174-12870812 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 55, 25

Conread position: 1-350
Cow position: chr1:14981289-14980940 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 236
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 22, 125

Conread position: 1-350
Cow position: chr1:20000919-20000558 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 103

Conread position: 1-350
Cow position: chr1:20667909-20667552 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 270

Conread position: 1-350
Cow position: chr1:22525713-22526072 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 23

Conread position: 1-350
Cow position: chr1:23969203-23968867 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 253
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 55, 25

Conread position: 1-350
Cow position: chr1:27114500-27114835 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 236
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 60, 29

Conread position: 1-350
Cow position: chr1:42545951-42545602 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 25

Conread position: 1-350
Cow position: chr1:42887430-42887082 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 63, 22

Conread position: 1-350
Cow position: chr1:44506800-44507166 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 1-350
Cow position: chr1:48444352-48443993 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 27

Conread position: 1-350
Cow position: chr1:49317664-49317303 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 1-350
Cow position: chr1:51394257-51394616 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 25

Conread position: 1-350
Cow position: chr1:54478157-54478514 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 287

Conread position: 1-350
Cow position: chr1:59518753-59519109 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 90

Conread position: 1-350
Cow position: chr1:61564625-61564979 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 232
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 178

Conread position: 1-350
Cow position: chr1:71045587-71045933 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 224

Conread position: 1-350
Cow position: chr1:74956191-74955834 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 215

Conread position: 1-350
Cow position: chr1:90621682-90621308 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 252
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 130

Conread position: 1-350
Cow position: chr1:95100794-95101149 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 242
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 24, 72

Conread position: 2-171
Cow position: chr1:4293896-4294064 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 54, 24

Conread position: 2-178
Cow position: chr1:45673544-45673730 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 23

Conread position: 2-188
Cow position: chr1:5873138-5872943 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 24, 131

Conread position: 2-207
Cow position: chr1:57635300-57635505 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 23, 17

Conread position: 2-223
Cow position: chr1:60907204-60907436 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 2-245
Cow position: chr1:63390940-63390686 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 2-274
Cow position: chr1:88652464-88652746 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 24, 119

Conread position: 2-275
Cow position: chr1:42874113-42873839 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 69

Conread position: 2-286
Cow position: chr1:21460701-21460991 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 208
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 54, 24

Conread position: 2-298
Cow position: chr1:21835782-21836066 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 216
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 63, 24

Conread position: 2-318
Cow position: chr1:86578782-86579117 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 239
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 19, 228

Conread position: 2-320
Cow position: chr1:53520740-53521082 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 24, 152

Conread position: 2-338
Cow position: chr1:68845652-68845320 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 243
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 24, 92

Conread position: 2-346
Cow position: chr1:68827072-68826730 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 249
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 22, 215

Conread position: 2-346
Cow position: chr1:100400368-100400010 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 235
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 29, 304

Conread position: 2-350
Cow position: chr1:3923961-3923606 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 123

Conread position: 2-350
Cow position: chr1:10778407-10778752 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 7

Conread position: 2-350
Cow position: chr1:68817965-68817603 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 249
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 24, 209

Conread position: 2-350
Cow position: chr1:69539531-69539883 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 133

Conread position: 2-350
Cow position: chr1:97622364-97622041 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 2-353
Cow position: chr1:31272604-31272248 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 15

Conread position: 3-186
Cow position: chr1:81638237-81638427 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 101

Conread position: 3-187
Cow position: chr1:63905636-63905451 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 23, 33

Conread position: 3-193
Cow position: chr1:51684634-51684836 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 134

Conread position: 3-193
Cow position: chr1:99095195-99095391 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 19, 184

Conread position: 3-263
Cow position: chr1:87211780-87212032 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 172
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 136

Conread position: 3-271
Cow position: chr1:27145815-27145546 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 21, 143

Conread position: 3-274
Cow position: chr1:96277220-96276941 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 190

Conread position: 3-283
Cow position: chr1:7442819-7443095 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 187
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 53, 40

Conread position: 3-283
Cow position: chr1:68763847-68763569 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 117

Conread position: 3-338
Cow position: chr1:54199549-54199208 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 245
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 23, 231

Conread position: 3-350
Cow position: chr1:6305030-6304679 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 23, 134

Conread position: 3-350
Cow position: chr1:45555198-45555563 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 134

Conread position: 4-170
Cow position: chr1:41004527-41004354 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 4-176
Cow position: chr1:12596066-12595889 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 57, 19

Conread position: 4-176
Cow position: chr1:75967267-75967443 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 4-186
Cow position: chr1:33811765-33811952 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 117

Conread position: 4-187
Cow position: chr1:71818622-71818439 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 140

Conread position: 4-187
Cow position: chr1:95050264-95050064 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 22, 127

Conread position: 4-189
Cow position: chr1:3137763-3137951 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 133

Conread position: 4-196
Cow position: chr1:83593969-83593776 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 22, 133

Conread position: 4-213
Cow position: chr1:57639681-57639466 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 45

Conread position: 4-214
Cow position: chr1:80631538-80631749 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 22

Conread position: 4-231
Cow position: chr1:1991585-1991351 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 83

Conread position: 4-244
Cow position: chr1:90864460-90864213 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 164
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 139

Conread position: 4-245
Cow position: chr1:53423518-53423766 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 151

Conread position: 4-254
Cow position: chr1:9470562-9470308 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 22, 131

Conread position: 4-261
Cow position: chr1:55146641-55146895 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 41

Conread position: 4-268
Cow position: chr1:81563572-81563849 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 4-270
Cow position: chr1:7350378-7350654 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 180
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 4-270
Cow position: chr1:51769923-51770197 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 22, 142

Conread position: 4-271
Cow position: chr1:75141838-75142104 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 22, 92

Conread position: 4-273
Cow position: chr1:90423246-90422974 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 192

Conread position: 4-274
Cow position: chr1:85162708-85162437 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 178
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 62

Conread position: 4-275
Cow position: chr1:12978516-12978793 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 132

Conread position: 4-278
Cow position: chr1:53495303-53495575 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 126

Conread position: 4-282
Cow position: chr1:76470490-76470761 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 47, 19

Conread position: 4-282
Cow position: chr1:95557872-95558155 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 88

Conread position: 4-283
Cow position: chr1:41735785-41735501 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 187
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 76

Conread position: 4-283
Cow position: chr1:49433425-49433145 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 58, 130

Conread position: 4-283
Cow position: chr1:55429120-55428837 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 22, 88

Conread position: 4-283
Cow position: chr1:69678486-69678206 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 185
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 58

Conread position: 4-283
Cow position: chr1:80336407-80336130 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 62

Conread position: 4-283
Cow position: chr1:81613225-81613508 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 20, 0

Conread position: 4-283
Cow position: chr1:91875071-91874798 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 60, 39

Conread position: 4-283
Cow position: chr1:98594406-98594684 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 22, 31

Conread position: 4-285
Cow position: chr1:95215346-95215069 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 26, 132

Conread position: 4-288
Cow position: chr1:50345382-50345668 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 194
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 63

Conread position: 4-290
Cow position: chr1:61742132-61741841 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 191
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 75

Conread position: 4-290
Cow position: chr1:81913312-81913030 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 22, 65

Conread position: 4-291
Cow position: chr1:33331249-33330967 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 159

Conread position: 4-291
Cow position: chr1:61005726-61005435 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 205
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 22, 130

Conread position: 4-291
Cow position: chr1:62036640-62036929 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 187
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 110

Conread position: 4-291
Cow position: chr1:68619098-68618807 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 22, 171

Conread position: 4-291
Cow position: chr1:69264652-69264936 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 52, 83

Conread position: 4-291
Cow position: chr1:74822291-74822579 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 64

Conread position: 4-291
Cow position: chr1:89342157-89341852 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 208
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 60, 19

Conread position: 4-302
Cow position: chr1:41696894-41697195 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 22, 159

Conread position: 4-302
Cow position: chr1:93043865-93044156 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 203
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 22, 65

Conread position: 4-313
Cow position: chr1:67305405-67305094 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 219
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 26, 76

Conread position: 4-318
Cow position: chr1:22827005-22827312 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 210
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 55, 19

Conread position: 4-320
Cow position: chr1:75347456-75347774 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 221
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 241

Conread position: 4-333
Cow position: chr1:66430136-66430455 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 233
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 21, 100

Conread position: 4-338
Cow position: chr1:20544131-20544453 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 184

Conread position: 4-343
Cow position: chr1:4290994-4291346 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 213

Conread position: 4-343
Cow position: chr1:40599879-40600216 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 228
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 22, 260

Conread position: 4-343
Cow position: chr1:41181679-41182027 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 237
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 129

Conread position: 4-346
Cow position: chr1:38753753-38754111 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 22, 0

Conread position: 4-346
Cow position: chr1:70538443-70538800 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 22, 0

Conread position: 4-346
Cow position: chr1:95765249-95764918 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 223
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 71

Conread position: 4-347
Cow position: chr1:74947287-74946944 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 22, 242

Conread position: 4-349
Cow position: chr1:32341369-32341018 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 237
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 67

Conread position: 4-349
Cow position: chr1:61884755-61885109 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 239
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 65

Conread position: 4-350
Cow position: chr1:15333717-15334086 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 261
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 22, 200

Conread position: 4-350
Cow position: chr1:29935542-29935193 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 233
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 89

Conread position: 4-350
Cow position: chr1:35162243-35162603 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 251

Conread position: 4-350
Cow position: chr1:40192847-40192505 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 22, 96

Conread position: 4-350
Cow position: chr1:69415878-69415531 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 239
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 241

Conread position: 4-350
Cow position: chr1:75382831-75383161 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 242
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 26, 118

Conread position: 4-350
Cow position: chr1:82337945-82337582 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 210

Conread position: 5-212
Cow position: chr1:95654875-95654665 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 90

Conread position: 5-294
Cow position: chr1:81319130-81319416 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 191
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 125

Conread position: 5-295
Cow position: chr1:49795845-49796125 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 56, 25

Conread position: 5-308
Cow position: chr1:93554680-93554979 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 83

Conread position: 6-261
Cow position: chr1:90640866-90641125 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 202

Conread position: 6-281
Cow position: chr1:60281208-60281491 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 9-285
Cow position: chr1:97938806-97939078 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 18, 130

Conread position: 10-207
Cow position: chr1:43447985-43447786 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 52, 16

Conread position: 10-239
Cow position: chr1:78791461-78791229 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 5

Conread position: 10-243
Cow position: chr1:21934334-21934096 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 233

Conread position: 10-246
Cow position: chr1:57297316-57297564 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 46, 0

Conread position: 10-266
Cow position: chr1:57264149-57263907 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 201
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 46, 16

Conread position: 10-283
Cow position: chr1:24778141-24777875 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 52, 13

Conread position: 10-346
Cow position: chr1:54258405-54258763 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 95

Conread position: 10-347
Cow position: chr1:53622800-53623149 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 108

Conread position: 10-350
Cow position: chr1:39418280-39417933 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 249
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 16, 256

Conread position: 11-173
Cow position: chr1:89438093-89437929 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 115

Conread position: 11-243
Cow position: chr1:96478534-96478779 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 127

Conread position: 11-248
Cow position: chr1:69540143-69540366 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 15, 96

Conread position: 11-248
Cow position: chr1:89485419-89485664 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 15, 28

Conread position: 11-249
Cow position: chr1:68951470-68951710 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 15, 137

Conread position: 11-269
Cow position: chr1:62291847-62291596 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 19

Conread position: 11-275
Cow position: chr1:68855013-68855276 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 187
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 15, 73

Conread position: 11-277
Cow position: chr1:47658192-47658458 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 21, 15

Conread position: 11-283
Cow position: chr1:4032468-4032751 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 11-283
Cow position: chr1:97231804-97232079 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 78

Conread position: 11-287
Cow position: chr1:100421681-100421943 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 11-290
Cow position: chr1:39069112-39068829 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 115

Conread position: 11-291
Cow position: chr1:5579904-5580183 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 106, 12

Conread position: 11-291
Cow position: chr1:76019848-76019570 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 21, 15

Conread position: 11-294
Cow position: chr1:76613287-76613006 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 184
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 120, 14

Conread position: 11-312
Cow position: chr1:100741130-100741423 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 15, 169

Conread position: 11-323
Cow position: chr1:30441802-30442109 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 27, 58

Conread position: 11-338
Cow position: chr1:74084354-74084002 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 253
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 15, 197

Conread position: 11-340
Cow position: chr1:45019964-45019618 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 15, 0

Conread position: 11-346
Cow position: chr1:31348071-31347740 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 242
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 24

Conread position: 11-347
Cow position: chr1:71135995-71136326 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 239
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 15, 60

Conread position: 11-349
Cow position: chr1:46218424-46218747 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 241
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 15, 59

Conread position: 11-350
Cow position: chr1:10632896-10633238 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 235
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 12

Conread position: 11-350
Cow position: chr1:19465901-19466234 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 122

Conread position: 11-350
Cow position: chr1:24133214-24132865 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 53, 75

Conread position: 11-350
Cow position: chr1:42555108-42555441 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 28

Conread position: 11-350
Cow position: chr1:43505365-43505722 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 12, 0

Conread position: 11-350
Cow position: chr1:72011965-72011624 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 12

Conread position: 11-350
Cow position: chr1:96472293-96472613 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 15

Conread position: 11-353
Cow position: chr1:23099742-23100084 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 231
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 15, 246

Conread position: 12-184
Cow position: chr1:56643743-56643566 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 59

Conread position: 12-184
Cow position: chr1:56674282-56674106 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 44, 77

Conread position: 12-190
Cow position: chr1:79663818-79663647 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 88

Conread position: 12-193
Cow position: chr1:64421178-64421360 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 67

Conread position: 12-217
Cow position: chr1:70028426-70028633 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 164
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 14, 123

Conread position: 12-222
Cow position: chr1:93228369-93228583 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 13, 124

Conread position: 12-245
Cow position: chr1:4374495-4374256 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 112

Conread position: 12-248
Cow position: chr1:70026500-70026261 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 123

Conread position: 12-248
Cow position: chr1:98310911-98311156 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 40, 11

Conread position: 12-277
Cow position: chr1:3962848-3962574 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 14, 67

Conread position: 12-283
Cow position: chr1:874490-874773 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 12-283
Cow position: chr1:11226396-11226129 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 44, 11

Conread position: 12-283
Cow position: chr1:13413874-13414143 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 14, 35

Conread position: 12-283
Cow position: chr1:16962164-16961891 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 44, 11

Conread position: 12-283
Cow position: chr1:33207027-33206761 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 101

Conread position: 12-283
Cow position: chr1:53369924-53370202 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 44, 11

Conread position: 12-283
Cow position: chr1:94226704-94226436 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 14

Conread position: 12-285
Cow position: chr1:34771661-34771382 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 106

Conread position: 12-287
Cow position: chr1:77683201-77683475 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 14, 137

Conread position: 12-291
Cow position: chr1:48730981-48730705 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 18, 85

Conread position: 12-291
Cow position: chr1:95499648-95499369 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 14, 74

Conread position: 12-291
Cow position: chr1:97696584-97696872 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 14, 208

Conread position: 12-313
Cow position: chr1:45007315-45007616 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 211
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 136, 11

Conread position: 12-338
Cow position: chr1:56477436-56477771 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 31

Conread position: 12-343
Cow position: chr1:26688631-26688300 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 223
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 57

Conread position: 12-346
Cow position: chr1:21787174-21787518 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 302

Conread position: 12-349
Cow position: chr1:22728895-22729251 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 238
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 14, 344

Conread position: 12-350
Cow position: chr1:14206312-14205966 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 235
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 90

Conread position: 12-350
Cow position: chr1:36998036-36998380 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 251
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 14, 103

Conread position: 12-350
Cow position: chr1:79165242-79164884 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 206

Conread position: 12-350
Cow position: chr1:81290360-81290702 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 239
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 144, 11

Conread position: 12-350
Cow position: chr1:93110778-93110434 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 242
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 15, 158

Conread position: 12-350
Cow position: chr1:93499470-93499817 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 240
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 18, 82

Conread position: 12-350
Cow position: chr1:100551810-100552164 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 12-352
Cow position: chr1:11729025-11729370 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 19, 123

Conread position: 13-182
Cow position: chr1:3340786-3340956 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 74

Conread position: 13-183
Cow position: chr1:64962824-64962648 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 13, 99

Conread position: 13-191
Cow position: chr1:53540240-53540418 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 78

Conread position: 13-191
Cow position: chr1:98557933-98557758 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 10

Conread position: 13-193
Cow position: chr1:11770444-11770263 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 10

Conread position: 13-204
Cow position: chr1:24655806-24655995 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 105

Conread position: 13-211
Cow position: chr1:24235672-24235472 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 112

Conread position: 13-217
Cow position: chr1:182654-182857 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 17

Conread position: 13-217
Cow position: chr1:45535552-45535760 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 43, 10

Conread position: 13-243
Cow position: chr1:60707253-60707482 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 155
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 42, 10

Conread position: 13-243
Cow position: chr1:91816923-91816692 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 67, 10

Conread position: 13-247
Cow position: chr1:91800757-91800517 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 13, 99

Conread position: 13-248
Cow position: chr1:101946862-101946630 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 13, 22

Conread position: 13-274
Cow position: chr1:63434961-63434696 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 13, 0

Conread position: 13-274
Cow position: chr1:73761511-73761250 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 13, 31

Conread position: 13-275
Cow position: chr1:25383507-25383779 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 13, 171

Conread position: 13-283
Cow position: chr1:7748064-7748332 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 184
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 10

Conread position: 13-283
Cow position: chr1:7752230-7752498 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 184
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 10

Conread position: 13-283
Cow position: chr1:8349470-8349205 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 43, 17

Conread position: 13-283
Cow position: chr1:47233634-47233359 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 13, 0

Conread position: 13-283
Cow position: chr1:52994872-52995145 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 72

Conread position: 13-283
Cow position: chr1:63530421-63530677 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 13

Conread position: 13-283
Cow position: chr1:74927725-74928003 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 13, 82

Conread position: 13-283
Cow position: chr1:78810886-78811158 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 185
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 10

Conread position: 13-283
Cow position: chr1:78857476-78857210 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 13, 78

Conread position: 13-283
Cow position: chr1:84282919-84283192 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 184
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 20

Conread position: 13-286
Cow position: chr1:43872484-43872198 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 43, 10

Conread position: 13-287
Cow position: chr1:46030512-46030243 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 13, 136

Conread position: 13-290
Cow position: chr1:53308546-53308267 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 210
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 95

Conread position: 13-291
Cow position: chr1:3882620-3882331 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 187
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 13-291
Cow position: chr1:24581428-24581702 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 188
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 74

Conread position: 13-291
Cow position: chr1:86110884-86110619 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 56, 10

Conread position: 13-291
Cow position: chr1:92369577-92369862 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 244

Conread position: 13-305
Cow position: chr1:19885233-19885526 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 13, 71

Conread position: 13-308
Cow position: chr1:73960550-73960849 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 213
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 119

Conread position: 13-325
Cow position: chr1:71295466-71295126 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 229
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 116

Conread position: 13-334
Cow position: chr1:53397836-53398155 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 222
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 73

Conread position: 13-337
Cow position: chr1:55705405-55705062 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 228
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 13, 323

Conread position: 13-338
Cow position: chr1:37322157-37321824 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 13, 204

Conread position: 13-338
Cow position: chr1:72068993-72068645 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 13-338
Cow position: chr1:89510078-89509742 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 235
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 25, 111

Conread position: 13-340
Cow position: chr1:53374276-53374619 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 238
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 13, 31

Conread position: 13-346
Cow position: chr1:7739805-7740137 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 231
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 271, 26

Conread position: 13-346
Cow position: chr1:10655328-10655671 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 228
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 10

Conread position: 13-347
Cow position: chr1:70434848-70435181 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 13, 95

Conread position: 13-350
Cow position: chr1:28176848-28177178 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 239
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 13, 128

Conread position: 13-350
Cow position: chr1:41115868-41115538 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 10

Conread position: 13-350
Cow position: chr1:42175569-42175926 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 237
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 123

Conread position: 13-350
Cow position: chr1:61391944-61391598 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 13, 122

Conread position: 13-350
Cow position: chr1:64678546-64678878 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 237
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 13, 49

Conread position: 14-226
Cow position: chr1:61742614-61742399 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 135

Conread position: 14-275
Cow position: chr1:724584-724851 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 12, 33

Conread position: 14-285
Cow position: chr1:18936984-18936717 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 196
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 12, 98

Conread position: 14-291
Cow position: chr1:98461140-98461410 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 13, 71

Conread position: 14-309
Cow position: chr1:98030764-98031074 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 12, 55

Conread position: 14-336
Cow position: chr1:102756580-102756251 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 229
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 36, 9

Conread position: 14-346
Cow position: chr1:34159681-34160022 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 110

Conread position: 14-350
Cow position: chr1:22192611-22192968 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 249
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 48, 9

Conread position: 15-283
Cow position: chr1:91811636-91811897 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 25, 8

Conread position: 15-350
Cow position: chr1:91066306-91065959 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 210

Conread position: 16-304
Cow position: chr1:84240743-84241019 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 10

Conread position: 16-350
Cow position: chr1:82936738-82936407 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 229
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 15, 55

Conread position: 17-292
Cow position: chr1:20732553-20732832 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 186
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 39, 109

Conread position: 17-292
Cow position: chr1:23512806-23512533 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 87

Conread position: 17-351
Cow position: chr1:88913168-88913519 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 236
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 44, 209

Conread position: 19-198
Cow position: chr1:1801990-1802176 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 83

Conread position: 19-227
Cow position: chr1:24445776-24445564 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 7, 28

Conread position: 19-263
Cow position: chr1:43703258-43703508 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 0

Conread position: 19-271
Cow position: chr1:70312954-70312684 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 11, 103

Conread position: 19-273
Cow position: chr1:81868875-81868620 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 12, 91

Conread position: 19-283
Cow position: chr1:41252547-41252291 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 7, 79

Conread position: 19-283
Cow position: chr1:65909377-65909629 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 7, 127

Conread position: 19-285
Cow position: chr1:57420877-57420615 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 7, 127

Conread position: 19-288
Cow position: chr1:100770898-100770611 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 13, 7

Conread position: 19-291
Cow position: chr1:56225320-56225596 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 45, 7

Conread position: 19-293
Cow position: chr1:24534402-24534129 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 45, 188

Conread position: 19-320
Cow position: chr1:61721525-61721233 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 212
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 122, 7

Conread position: 19-325
Cow position: chr1:22730609-22730906 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 252, 7

Conread position: 19-338
Cow position: chr1:2075487-2075164 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 227
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 7

Conread position: 19-346
Cow position: chr1:7971272-7971598 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 241
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 7, 64

Conread position: 19-346
Cow position: chr1:65318426-65318771 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 6, 75

Conread position: 19-346
Cow position: chr1:96365520-96365843 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 236
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 37, 7

Conread position: 19-350
Cow position: chr1:6166092-6166430 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 70

Conread position: 19-350
Cow position: chr1:30047740-30047429 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 44, 7

Conread position: 19-350
Cow position: chr1:50931125-50930782 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 7, 82

Conread position: 20-277
Cow position: chr1:29627059-29626800 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 113

Conread position: 20-350
Cow position: chr1:46839450-46839787 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 220
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 5, 203

Conread position: 21-327
Cow position: chr1:78838653-78838962 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 222
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 40, 14

Conread position: 22-334
Cow position: chr1:50045654-50045964 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 210
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 46, 179

Conread position: 23-192
Cow position: chr1:38544605-38544436 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 39, 77

Conread position: 23-193
Cow position: chr1:82504829-82505005 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 23-203
Cow position: chr1:52956109-52956297 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 23-230
Cow position: chr1:7609470-7609686 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 23-274
Cow position: chr1:26702352-26702097 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 18, 180

Conread position: 23-282
Cow position: chr1:91023612-91023349 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 100

Conread position: 23-283
Cow position: chr1:6228729-6228466 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 244

Conread position: 23-288
Cow position: chr1:85647926-85647655 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 41, 238

Conread position: 23-292
Cow position: chr1:101834680-101834943 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 41, 63

Conread position: 23-298
Cow position: chr1:96081340-96081613 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 33, 65

Conread position: 23-332
Cow position: chr1:16855835-16855521 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 70

Conread position: 23-340
Cow position: chr1:93528550-93528882 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 171

Conread position: 23-343
Cow position: chr1:23186941-23186611 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 222
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 70

Conread position: 23-345
Cow position: chr1:17196773-17196432 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 41, 23

Conread position: 23-352
Cow position: chr1:26531721-26531401 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 211
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 54, 7

Conread position: 24-187
Cow position: chr1:86511989-86512154 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 10

Conread position: 24-213
Cow position: chr1:1165462-1165648 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 36, 59

Conread position: 24-282
Cow position: chr1:53458553-53458813 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 40, 190

Conread position: 24-350
Cow position: chr1:57575902-57575566 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 230
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 40, 99

Conread position: 26-290
Cow position: chr1:79640432-79640163 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 176
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 267

Conread position: 28-283
Cow position: chr1:43311912-43311652 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 7

Conread position: 28-283
Cow position: chr1:89448758-89449019 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 28-350
Cow position: chr1:68862894-68863217 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 73

Conread position: 28-351
Cow position: chr1:39225064-39224740 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 253

Conread position: 29-156
Cow position: chr1:13577528-13577395 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 29-184
Cow position: chr1:29901110-29900945 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 27, 63

Conread position: 29-193
Cow position: chr1:6961769-6961937 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 117

Conread position: 29-208
Cow position: chr1:48696903-48696727 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 57

Conread position: 29-239
Cow position: chr1:102647411-102647198 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 27, 73

Conread position: 29-282
Cow position: chr1:98551578-98551837 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 33, 242

Conread position: 29-283
Cow position: chr1:20950583-20950832 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 34, 116

Conread position: 29-283
Cow position: chr1:76436353-76436599 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 171
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 104

Conread position: 29-283
Cow position: chr1:90976225-90975969 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 27, 107

Conread position: 29-285
Cow position: chr1:68253453-68253716 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 180
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 119

Conread position: 29-291
Cow position: chr1:87197689-87197946 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 108, 41

Conread position: 29-334
Cow position: chr1:24407025-24406732 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 36

Conread position: 29-343
Cow position: chr1:84812071-84811750 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 228
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 111, 41

Conread position: 29-345
Cow position: chr1:8129105-8128786 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 220
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 122, 41

Conread position: 29-348
Cow position: chr1:97090189-97090513 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 220
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 40, 61

Conread position: 29-350
Cow position: chr1:90595693-90595379 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 230
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 28, 126

Conread position: 30-323
Cow position: chr1:89742134-89741835 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 26, 96

Conread position: 30-350
Cow position: chr1:64572376-64572712 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 104

Conread position: 31-167
Cow position: chr1:98397095-98396957 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 108

Conread position: 31-291
Cow position: chr1:18780470-18780203 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 54

Conread position: 31-291
Cow position: chr1:41047436-41047176 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 180
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 125, 39

Conread position: 31-330
Cow position: chr1:72731902-72732200 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 19, 53

Conread position: 31-339
Cow position: chr1:85141868-85141567 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 211
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 131

Conread position: 32-283
Cow position: chr1:86073459-86073715 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 26, 91

Conread position: 34-244
Cow position: chr1:101715220-101715003 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 101

Conread position: 35-248
Cow position: chr1:5023888-5023678 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 55

Conread position: 35-274
Cow position: chr1:89349830-89350075 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 29, 0

Conread position: 35-275
Cow position: chr1:10064107-10063870 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 35

Conread position: 35-281
Cow position: chr1:53425042-53425294 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 35-291
Cow position: chr1:85550210-85549951 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 35-327
Cow position: chr1:97954591-97954308 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 188
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 35-346
Cow position: chr1:85028826-85029130 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 29, 50

Conread position: 35-350
Cow position: chr1:39427125-39426819 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 225
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 258, 37

Conread position: 36-350
Cow position: chr1:64302379-64302052 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 303

Conread position: 36-350
Cow position: chr1:78079596-78079921 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 227
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 16, 30

Conread position: 37-292
Cow position: chr1:31390722-31390461 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 19, 249

Conread position: 38-288
Cow position: chr1:93810300-93810552 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 111

Conread position: 39-278
Cow position: chr1:72286185-72285954 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 30, 82

Conread position: 39-291
Cow position: chr1:30983619-30983369 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 44, 95

Conread position: 39-298
Cow position: chr1:6972405-6972662 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 190
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 246, 23

Conread position: 40-283
Cow position: chr1:26895102-26894853 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 9, 59

Conread position: 41-274
Cow position: chr1:26616197-26615964 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 140, 22

Conread position: 41-283
Cow position: chr1:100569025-100569275 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 41-289
Cow position: chr1:72105287-72105530 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 28, 133

Conread position: 41-319
Cow position: chr1:42869062-42868779 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 66, 157

Conread position: 41-350
Cow position: chr1:52052844-52052535 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 248

Conread position: 42-286
Cow position: chr1:20099246-20099488 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 14, 48

Conread position: 43-318
Cow position: chr1:3790190-3789915 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 184
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 90

Conread position: 45-291
Cow position: chr1:20104146-20104393 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 19, 107

Conread position: 45-298
Cow position: chr1:7022999-7023256 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 17, 73

Conread position: 45-343
Cow position: chr1:100324865-100324567 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 88

Conread position: 49-291
Cow position: chr1:98360513-98360278 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 89, 68

Conread position: 49-344
Cow position: chr1:26427977-26427688 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 43

Conread position: 50-193
Cow position: chr1:68996068-68996209 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 50-264
Cow position: chr1:40482517-40482313 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 81, 54

Conread position: 50-283
Cow position: chr1:3352808-3352581 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 50-283
Cow position: chr1:9013425-9013653 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 92, 74

Conread position: 50-283
Cow position: chr1:25734754-25734986 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 170, 0

Conread position: 50-283
Cow position: chr1:32001435-32001202 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 76, 145

Conread position: 50-283
Cow position: chr1:37726529-37726300 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 217, 39

Conread position: 50-283
Cow position: chr1:38278148-38277910 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 219

Conread position: 50-283
Cow position: chr1:87936785-87937014 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 77, 0

Conread position: 50-288
Cow position: chr1:30418152-30417923 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 181
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 16, 20

Conread position: 50-288
Cow position: chr1:100706019-100706250 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 91, 0

Conread position: 50-291
Cow position: chr1:56618766-56618529 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 13, 178

Conread position: 50-291
Cow position: chr1:80422166-80422400 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 233, 77

Conread position: 50-291
Cow position: chr1:81580062-81580305 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 97, 5

Conread position: 50-320
Cow position: chr1:69695106-69694830 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 100

Conread position: 50-338
Cow position: chr1:5637190-5636886 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 82, 257

Conread position: 50-346
Cow position: chr1:67585434-67585745 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 207
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 76, 199

Conread position: 50-350
Cow position: chr1:43340726-43340435 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 209
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 90, 77

Conread position: 50-350
Cow position: chr1:54156846-54156536 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 66

Conread position: 50-350
Cow position: chr1:67919033-67919326 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 216, 33

Conread position: 51-283
Cow position: chr1:72813501-72813735 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 91, 115

Conread position: 51-291
Cow position: chr1:78697882-78697644 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 76, 32

Conread position: 55-186
Cow position: chr1:80942438-80942570 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 55-210
Cow position: chr1:15169441-15169287 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 55-243
Cow position: chr1:635794-635606 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 85, 90

Conread position: 55-278
Cow position: chr1:43822291-43822513 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 83, 148

Conread position: 55-282
Cow position: chr1:89835140-89835369 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 177

Conread position: 55-284
Cow position: chr1:6826398-6826179 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 55-338
Cow position: chr1:47790771-47790482 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 85, 18

Conread position: 55-338
Cow position: chr1:102266377-102266084 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 197
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 88, 51

Conread position: 55-343
Cow position: chr1:34856741-34856434 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 0

Conread position: 55-349
Cow position: chr1:3607701-3607992 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 232, 85

Conread position: 55-349
Cow position: chr1:71119409-71119718 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 224
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 72, 19

Conread position: 55-350
Cow position: chr1:11172266-11172566 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 187
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 160, 0

Conread position: 55-350
Cow position: chr1:78794334-78794038 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 213, 73

Conread position: 56-245
Cow position: chr1:648216-648406 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 56-245
Cow position: chr1:71399177-71399367 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 93, 27

Conread position: 56-269
Cow position: chr1:14309143-14308928 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 91, 72

Conread position: 56-347
Cow position: chr1:47886594-47886285 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 83, 140

Conread position: 57-277
Cow position: chr1:86062093-86061878 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 74

Conread position: 57-290
Cow position: chr1:98413663-98413899 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 83, 38

Conread position: 58-283
Cow position: chr1:33997024-33996805 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 59-283
Cow position: chr1:71350828-71350608 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 60-218
Cow position: chr1:61724126-61723964 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 61-198
Cow position: chr1:71716407-71716544 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 61

Conread position: 61-223
Cow position: chr1:8984788-8984623 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 66, 56

Conread position: 61-247
Cow position: chr1:92433897-92434083 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 79, 107

Conread position: 61-279
Cow position: chr1:61543021-61542804 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 144, 0

Conread position: 61-283
Cow position: chr1:77424999-77425221 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 60, 72

Conread position: 61-349
Cow position: chr1:81582019-81582292 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 134, 54

Conread position: 62-283
Cow position: chr1:31795105-31794890 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 62-283
Cow position: chr1:89076731-89076514 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 62-298
Cow position: chr1:89785809-89786044 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 225, 66

Conread position: 62-340
Cow position: chr1:13548085-13547792 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 140, 21

Conread position: 63-272
Cow position: chr1:19227156-19226949 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 63-283
Cow position: chr1:22823804-22824024 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 77, 24

Conread position: 63-327
Cow position: chr1:42482102-42482374 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 175, 70

Conread position: 65-292
Cow position: chr1:100474132-100474361 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 84, 225

Conread position: 68-278
Cow position: chr1:30189050-30189266 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 59, 0

Conread position: 68-286
Cow position: chr1:46783223-46783432 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 48

Conread position: 68-291
Cow position: chr1:45670542-45670758 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 68-291
Cow position: chr1:98511832-98512054 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 217, 74

Conread position: 68-298
Cow position: chr1:48769706-48769936 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 9, 77

Conread position: 68-330
Cow position: chr1:55818965-55819217 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 254, 38

Conread position: 68-338
Cow position: chr1:49082644-49082932 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 68-350
Cow position: chr1:42541500-42541789 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 64

Conread position: 68-350
Cow position: chr1:82513452-82513154 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 200
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 64

Conread position: 69-350
Cow position: chr1:6854397-6854121 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 35

Conread position: 69-350
Cow position: chr1:43855206-43855487 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 78, 91

Conread position: 70-283
Cow position: chr1:73756340-73756132 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 70-283
Cow position: chr1:84255669-84255886 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 70-283
Cow position: chr1:92989495-92989709 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 70, 182

Conread position: 70-338
Cow position: chr1:65028435-65028706 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 14, 232

Conread position: 70-344
Cow position: chr1:22944120-22943836 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 135

Conread position: 70-346
Cow position: chr1:627867-628162 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 195
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 118, 62

Conread position: 71-291
Cow position: chr1:90904847-90904630 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 53

Conread position: 71-343
Cow position: chr1:46030866-46031152 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 75, 58

Conread position: 72-291
Cow position: chr1:67688672-67688457 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 71

Conread position: 74-274
Cow position: chr1:4581417-4581220 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 82, 30

Conread position: 74-291
Cow position: chr1:50991844-50992060 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 55, 46

Conread position: 74-302
Cow position: chr1:71796404-71796174 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 70, 32

Conread position: 74-350
Cow position: chr1:82880554-82880829 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 73

Conread position: 74-353
Cow position: chr1:49825160-49824864 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 0

Conread position: 75-346
Cow position: chr1:71666022-71665740 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 66, 43

Conread position: 78-248
Cow position: chr1:72684610-72684776 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 128

Conread position: 78-283
Cow position: chr1:65103533-65103734 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 65, 41

Conread position: 79-260
Cow position: chr1:12725611-12725431 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 50

Conread position: 79-291
Cow position: chr1:95153134-95153350 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 48, 104

Conread position: 79-303
Cow position: chr1:56832859-56832640 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 200, 40

Conread position: 79-307
Cow position: chr1:25281746-25281511 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 79-348
Cow position: chr1:30066532-30066798 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 184
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 59, 51

Conread position: 80-281
Cow position: chr1:8347039-8347240 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 83-319
Cow position: chr1:96192744-96192512 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 133, 36

Conread position: 84-243
Cow position: chr1:61560807-61560644 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 85-291
Cow position: chr1:68672679-68672474 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 60, 93

Conread position: 86-282
Cow position: chr1:98467729-98467917 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 28

Conread position: 87-278
Cow position: chr1:37707051-37706863 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 107

Conread position: 87-283
Cow position: chr1:48214239-48214039 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 125

Conread position: 87-291
Cow position: chr1:27881535-27881734 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 138
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 87-303
Cow position: chr1:78096847-78097069 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 87-350
Cow position: chr1:15902414-15902674 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 201

Conread position: 87-350
Cow position: chr1:43548135-43547871 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 7, 98

Conread position: 87-350
Cow position: chr1:52467224-52467483 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 67, 136

Conread position: 87-350
Cow position: chr1:98583680-98583946 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 44, 57

Conread position: 88-283
Cow position: chr1:6240355-6240164 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 88-283
Cow position: chr1:98575969-98576165 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 64, 54

Conread position: 88-290
Cow position: chr1:77232650-77232453 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 88-346
Cow position: chr1:53452466-53452715 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 45

Conread position: 88-350
Cow position: chr1:56225711-56225980 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 201
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 54

Conread position: 88-350
Cow position: chr1:102753776-102754048 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 66, 104

Conread position: 91-274
Cow position: chr1:68676288-68676469 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 92-283
Cow position: chr1:6394486-6394676 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 176, 52

Conread position: 92-319
Cow position: chr1:59147414-59147196 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 24

Conread position: 93-283
Cow position: chr1:186348-186162 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 129

Conread position: 93-320
Cow position: chr1:92684763-92684540 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 89, 37

Conread position: 94-291
Cow position: chr1:58036948-58037146 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 112

Conread position: 95-298
Cow position: chr1:73936221-73936009 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 95-343
Cow position: chr1:45223510-45223767 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 96-282
Cow position: chr1:19515683-19515501 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 96-291
Cow position: chr1:78068133-78067942 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 189, 43

Conread position: 97-317
Cow position: chr1:95676358-95676140 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 5

Conread position: 97-320
Cow position: chr1:96599348-96599127 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 151, 34

Conread position: 97-350
Cow position: chr1:46143530-46143269 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 114

Conread position: 99-291
Cow position: chr1:43312094-43311905 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 20

Conread position: 99-291
Cow position: chr1:95072264-95072460 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 33

Conread position: 101-313
Cow position: chr1:8624513-8624299 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 39, 149

Conread position: 101-338
Cow position: chr1:78066602-78066357 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 59

Conread position: 101-350
Cow position: chr1:33998693-33998947 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 112

Conread position: 102-283
Cow position: chr1:48206598-48206417 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 99

Conread position: 103-318
Cow position: chr1:88359819-88360030 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 205, 28

Conread position: 103-350
Cow position: chr1:48618301-48618049 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 148, 50

Conread position: 103-350
Cow position: chr1:101507296-101507548 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 14, 161

Conread position: 104-337
Cow position: chr1:97962582-97962810 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 37, 94

Conread position: 104-348
Cow position: chr1:22035548-22035804 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 20, 57

Conread position: 104-350
Cow position: chr1:62235508-62235258 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 23, 101

Conread position: 105-283
Cow position: chr1:39121899-39121718 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 32, 108

Conread position: 106-275
Cow position: chr1:21560957-21561123 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 106-278
Cow position: chr1:30504443-30504615 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 106-282
Cow position: chr1:44136230-44136052 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 64, 38

Conread position: 106-283
Cow position: chr1:46764815-46764994 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 156

Conread position: 106-291
Cow position: chr1:99221413-99221228 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 93

Conread position: 106-346
Cow position: chr1:77739657-77739918 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 20, 165

Conread position: 108-291
Cow position: chr1:31357568-31357383 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 147

Conread position: 108-291
Cow position: chr1:95974338-95974527 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 108-313
Cow position: chr1:21823312-21823511 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 108-350
Cow position: chr1:64218485-64218250 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 101

Conread position: 109-291
Cow position: chr1:71916174-71915992 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 23

Conread position: 109-350
Cow position: chr1:81481440-81481187 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 110-283
Cow position: chr1:84768934-84768760 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 111-271
Cow position: chr1:69482005-69481841 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 113-291
Cow position: chr1:500121-500303 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 116-291
Cow position: chr1:84203464-84203639 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 26, 93

Conread position: 116-350
Cow position: chr1:83886-84109 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 173, 15

Conread position: 119-282
Cow position: chr1:7907990-7908155 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 122-350
Cow position: chr1:97833667-97833895 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 60

Conread position: 128-298
Cow position: chr1:8670736-8670907 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 122

Conread position: 128-343
Cow position: chr1:8287669-8287439 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 18, 129

Conread position: 128-348
Cow position: chr1:72422446-72422210 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 12, 99

Conread position: 129-283
Cow position: chr1:102468651-102468498 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 131-352
Cow position: chr1:31256254-31256029 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 153, 20

Conread position: 132-346
Cow position: chr1:95835830-95835601 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 152, 0

Conread position: 132-350
Cow position: chr1:54289227-54289012 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 149
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 9, 156

Conread position: 132-350
Cow position: chr1:97144495-97144273 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 18

Conread position: 133-277
Cow position: chr1:13576917-13576767 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 133-318
Cow position: chr1:101177484-101177667 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 106

Conread position: 135-283
Cow position: chr1:45478888-45478744 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 135-330
Cow position: chr1:38205446-38205634 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 7, 0

Conread position: 136-291
Cow position: chr1:65881778-65881931 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 92

Conread position: 137-283
Cow position: chr1:54157266-54157415 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 5, 0

Conread position: 138-283
Cow position: chr1:42360260-42360407 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 138-297
Cow position: chr1:79087887-79087725 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 138-343
Cow position: chr1:99071104-99071303 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 115

Conread position: 139-291
Cow position: chr1:28470801-28470958 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 139-291
Cow position: chr1:68127215-68127063 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 139-297
Cow position: chr1:54732511-54732354 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 120

Conread position: 140-291
Cow position: chr1:85712415-85712566 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 125

Conread position: 141-330
Cow position: chr1:46006228-46006045 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 130, 117

Conread position: 141-349
Cow position: chr1:63078987-63079198 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 143, 80

Conread position: 141-350
Cow position: chr1:49980687-49980906 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 145, 79

Conread position: 144-340
Cow position: chr1:242537-242740 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 136, 0

Conread position: 144-349
Cow position: chr1:66752649-66752435 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 142, 0

Conread position: 144-350
Cow position: chr1:2462363-2462569 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 146, 46

Conread position: 145-349
Cow position: chr1:95618623-95618838 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 139, 0

Conread position: 145-350
Cow position: chr1:74082000-74081803 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 134, 0

Conread position: 146-282
Cow position: chr1:3914936-3914801 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 146-282
Cow position: chr1:38706872-38706736 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 146-282
Cow position: chr1:67529037-67529173 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 100
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 146-320
Cow position: chr1:88111857-88112023 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 164, 49

Conread position: 146-346
Cow position: chr1:6731163-6731373 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 139, 18

Conread position: 146-346
Cow position: chr1:51860579-51860370 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 139, 0

Conread position: 146-349
Cow position: chr1:92590179-92590370 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 146-350
Cow position: chr1:41027057-41027270 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 139, 53

Conread position: 146-350
Cow position: chr1:88338649-88338848 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 114, 0

Conread position: 147-291
Cow position: chr1:102648261-102648404 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 140, 0

Conread position: 148-291
Cow position: chr1:45315652-45315510 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 148-338
Cow position: chr1:23759765-23759951 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 77

Conread position: 148-350
Cow position: chr1:5006146-5006342 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 72, 0

Conread position: 149-289
Cow position: chr1:19304556-19304694 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 76

Conread position: 149-337
Cow position: chr1:61011166-61011360 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 136, 0

Conread position: 153-282
Cow position: chr1:64019532-64019403 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 154-284
Cow position: chr1:83301962-83301830 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 154-350
Cow position: chr1:68688573-68688777 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 139
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 131, 0

Conread position: 155-348
Cow position: chr1:7793530-7793338 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 131, 54

Conread position: 163-349
Cow position: chr1:43499297-43499113 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 165-338
Cow position: chr1:32014199-32014377 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 118, 10

Conread position: 167-350
Cow position: chr1:11770232-11770044 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 17

Conread position: 171-348
Cow position: chr1:20537212-20537398 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 172-346
Cow position: chr1:70483326-70483141 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 174-350
Cow position: chr1:64960421-64960248 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 148, 31

Conread position: 175-331
Cow position: chr1:81638559-81638721 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 179-343
Cow position: chr1:70416745-70416569 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 181-350
Cow position: chr1:63460895-63461076 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 184-350
Cow position: chr1:79663418-79663255 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 94, 0

Conread position: 185-350
Cow position: chr1:91796206-91796044 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 11

Conread position: 191-349
Cow position: chr1:84787297-84787457 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 128

Conread position: 210-338
Cow position: chr1:68871642-68871767 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 228-343
Cow position: chr1:39703028-39703143 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.