Cow genome map

Conread name: Pig1-118L19

Conread position: 1-146
Cow position: chr11:53719752-53719901 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 1-173
Cow position: chr11:49105865-49106043 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 25

Conread position: 1-173
Cow position: chr11:59370822-59371000 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 1-183
Cow position: chr11:21830545-21830352 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 24, 132

Conread position: 1-183
Cow position: chr11:37100552-37100361 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 141

Conread position: 1-184
Cow position: chr11:24967265-24967450 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 25, 76

Conread position: 1-186
Cow position: chr11:8105590-8105784 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 25, 120

Conread position: 1-186
Cow position: chr11:47586541-47586351 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 117

Conread position: 1-186
Cow position: chr11:48901270-48901084 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 25, 82

Conread position: 1-186
Cow position: chr11:62808841-62808653 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 145

Conread position: 1-186
Cow position: chr11:77241181-77241369 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 22

Conread position: 1-192
Cow position: chr11:36301273-36301073 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 150

Conread position: 1-193
Cow position: chr11:53130619-53130819 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 1-194
Cow position: chr11:77207856-77208049 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 143

Conread position: 1-198
Cow position: chr11:7333914-7333709 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 1-199
Cow position: chr11:73478428-73478620 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 134

Conread position: 1-204
Cow position: chr11:37068496-37068300 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 146, 25

Conread position: 1-204
Cow position: chr11:58990318-58990519 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 71

Conread position: 1-209
Cow position: chr11:16251441-16251222 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 1-211
Cow position: chr11:1668485-1668694 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 120

Conread position: 1-212
Cow position: chr11:42793168-42792948 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 21, 138

Conread position: 1-213
Cow position: chr11:3726093-3726314 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 136

Conread position: 1-214
Cow position: chr11:1486059-1485848 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 25, 135

Conread position: 1-214
Cow position: chr11:81174697-81174911 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 136

Conread position: 1-223
Cow position: chr11:27386532-27386303 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 25, 0

Conread position: 1-223
Cow position: chr11:48042231-48041997 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 29, 0

Conread position: 1-240
Cow position: chr11:30120854-30120609 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 63, 25

Conread position: 1-244
Cow position: chr11:27939294-27939540 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 25, 114

Conread position: 1-245
Cow position: chr11:33349894-33349643 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 127

Conread position: 1-248
Cow position: chr11:36286506-36286756 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 34

Conread position: 1-256
Cow position: chr11:32377995-32378257 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 24, 216

Conread position: 1-256
Cow position: chr11:70273108-70273375 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 1-269
Cow position: chr11:43430642-43430375 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 201
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 25, 95

Conread position: 1-271
Cow position: chr11:45646786-45646510 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 25, 220

Conread position: 1-272
Cow position: chr11:44642478-44642207 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 25, 120

Conread position: 1-273
Cow position: chr11:52983498-52983761 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-275
Cow position: chr11:33341339-33341057 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 20, 0

Conread position: 1-275
Cow position: chr11:34829971-34829698 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 25, 49

Conread position: 1-275
Cow position: chr11:40258594-40258322 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 61, 24

Conread position: 1-276
Cow position: chr11:36986769-36987038 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 21, 72

Conread position: 1-277
Cow position: chr11:85723509-85723782 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 137

Conread position: 1-278
Cow position: chr11:33754092-33753821 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 54, 14

Conread position: 1-279
Cow position: chr11:45872511-45872219 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 188
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 1-282
Cow position: chr11:59463828-59463547 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 29, 74

Conread position: 1-282
Cow position: chr11:63482618-63482335 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 25, 200

Conread position: 1-283
Cow position: chr11:4207121-4207404 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 29, 104

Conread position: 1-283
Cow position: chr11:21894346-21894067 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 195
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 120

Conread position: 1-283
Cow position: chr11:23138253-23137958 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 127

Conread position: 1-283
Cow position: chr11:29947119-29946818 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 1-283
Cow position: chr11:30924960-30925250 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 55, 22

Conread position: 1-283
Cow position: chr11:37804746-37804458 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 25, 96

Conread position: 1-283
Cow position: chr11:40792886-40792609 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 192
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 138, 73

Conread position: 1-283
Cow position: chr11:68912950-68913236 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 22

Conread position: 1-284
Cow position: chr11:25331932-25331648 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 195
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 66

Conread position: 1-286
Cow position: chr11:6234071-6233781 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 208
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 26, 134

Conread position: 1-286
Cow position: chr11:9221918-9221633 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 73

Conread position: 1-287
Cow position: chr11:1362673-1362367 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 225
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 22, 0

Conread position: 1-288
Cow position: chr11:48649785-48650074 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 25, 11

Conread position: 1-288
Cow position: chr11:56518505-56518212 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 190

Conread position: 1-290
Cow position: chr11:377841-377539 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 140

Conread position: 1-290
Cow position: chr11:73924751-73924459 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 194
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 26, 84

Conread position: 1-291
Cow position: chr11:1071284-1070986 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 205
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 30, 145

Conread position: 1-291
Cow position: chr11:11125471-11125767 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 25, 278

Conread position: 1-291
Cow position: chr11:25620588-25620288 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 25, 86

Conread position: 1-291
Cow position: chr11:54334143-54334433 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 25, 43

Conread position: 1-291
Cow position: chr11:59702292-59702594 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 210
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 25, 106

Conread position: 1-291
Cow position: chr11:62155433-62155743 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 25, 0

Conread position: 1-291
Cow position: chr11:65762789-65762485 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 217
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 63, 22

Conread position: 1-291
Cow position: chr11:70609595-70609901 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 216
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 55, 240

Conread position: 1-291
Cow position: chr11:77750960-77750669 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 50, 25

Conread position: 1-292
Cow position: chr11:58400070-58400353 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 206
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 11, 146

Conread position: 1-297
Cow position: chr11:76114463-76114752 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 23, 116

Conread position: 1-298
Cow position: chr11:71168770-71168477 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 139, 25

Conread position: 1-301
Cow position: chr11:38874595-38874289 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 261

Conread position: 1-318
Cow position: chr11:65988037-65988348 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 212
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 148

Conread position: 1-328
Cow position: chr11:68207030-68206692 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 226
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 105

Conread position: 1-330
Cow position: chr11:7924782-7924444 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 239
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 99

Conread position: 1-330
Cow position: chr11:77546226-77546557 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 216
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 87

Conread position: 1-338
Cow position: chr11:49152760-49153104 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 87

Conread position: 1-338
Cow position: chr11:58588152-58588491 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 106

Conread position: 1-343
Cow position: chr11:26535587-26535953 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 262
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 25, 132

Conread position: 1-343
Cow position: chr11:30934232-30934561 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 239
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 24, 130

Conread position: 1-343
Cow position: chr11:40818831-40818463 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 242
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 1-343
Cow position: chr11:42083287-42083622 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 84

Conread position: 1-343
Cow position: chr11:60302150-60301808 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 235
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 29, 98

Conread position: 1-343
Cow position: chr11:68905262-68904919 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 27

Conread position: 1-345
Cow position: chr11:50951358-50951706 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 244
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 22, 248

Conread position: 1-346
Cow position: chr11:19247387-19247033 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 25, 118

Conread position: 1-346
Cow position: chr11:56728754-56729107 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 229
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 23, 296

Conread position: 1-347
Cow position: chr11:27913082-27913459 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 259
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 25, 100

Conread position: 1-347
Cow position: chr11:36238588-36238939 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 251
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 24, 138

Conread position: 1-349
Cow position: chr11:11469826-11469478 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 232
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 102

Conread position: 1-349
Cow position: chr11:17860346-17859978 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 252
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 24, 129

Conread position: 1-349
Cow position: chr11:38638928-38639274 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 37

Conread position: 1-349
Cow position: chr11:62574191-62573853 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 243
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 64, 25

Conread position: 1-350
Cow position: chr11:11752712-11752360 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 240
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 20, 241

Conread position: 1-350
Cow position: chr11:18572611-18572959 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 29

Conread position: 1-350
Cow position: chr11:22932163-22931821 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 247
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 54, 25

Conread position: 1-350
Cow position: chr11:27248299-27248664 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 247
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 20, 211

Conread position: 1-350
Cow position: chr11:38334322-38334697 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 257
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 17, 127

Conread position: 1-350
Cow position: chr11:41215551-41215909 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 246
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 55, 144

Conread position: 1-350
Cow position: chr11:41986236-41985872 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 88

Conread position: 1-350
Cow position: chr11:42519549-42519888 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 238
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 25, 144

Conread position: 1-350
Cow position: chr11:47125373-47125700 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 240
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 138, 25

Conread position: 1-350
Cow position: chr11:48932776-48932413 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 255
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 25, 144

Conread position: 1-350
Cow position: chr11:65607886-65607515 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 1-350
Cow position: chr11:66188513-66188145 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 273

Conread position: 2-201
Cow position: chr11:51044121-51043914 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 2-207
Cow position: chr11:83196307-83196517 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 27, 183

Conread position: 2-213
Cow position: chr11:10076577-10076794 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 23

Conread position: 2-223
Cow position: chr11:8339596-8339370 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 28, 89

Conread position: 2-246
Cow position: chr11:53511892-53512140 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 13, 22

Conread position: 2-267
Cow position: chr11:51144526-51144793 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 24, 84

Conread position: 2-282
Cow position: chr11:77758952-77758666 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 23, 106

Conread position: 2-283
Cow position: chr11:34962870-34963165 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 148

Conread position: 2-287
Cow position: chr11:32436137-32436433 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 21, 95

Conread position: 2-291
Cow position: chr11:36659004-36658719 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 137, 12

Conread position: 2-291
Cow position: chr11:63847658-63847949 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 133

Conread position: 2-299
Cow position: chr11:40458929-40459221 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 24, 34

Conread position: 2-330
Cow position: chr11:33348376-33348038 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 148

Conread position: 2-346
Cow position: chr11:30708311-30708677 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 248
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 57, 24

Conread position: 2-347
Cow position: chr11:75480218-75479849 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 257
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 10, 30

Conread position: 2-350
Cow position: chr11:8988420-8988054 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 147

Conread position: 2-350
Cow position: chr11:36182497-36182867 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 246
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 24, 34

Conread position: 2-350
Cow position: chr11:39115302-39115649 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 228
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 20

Conread position: 3-172
Cow position: chr11:75748244-75748419 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 23, 80

Conread position: 3-186
Cow position: chr11:47165328-47165142 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 3-291
Cow position: chr11:30191983-30192282 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 201
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 3-291
Cow position: chr11:62620194-62620479 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 23, 68

Conread position: 3-325
Cow position: chr11:17660905-17661216 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 214
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 124

Conread position: 3-343
Cow position: chr11:10095157-10095512 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 249
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 23, 81

Conread position: 3-343
Cow position: chr11:81300799-81300452 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 243
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 20, 133

Conread position: 3-350
Cow position: chr11:13061419-13061078 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 225
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 112

Conread position: 3-350
Cow position: chr11:83043551-83043191 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 231
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 61, 22

Conread position: 4-129
Cow position: chr11:84890938-84890809 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 4-188
Cow position: chr11:30110782-30110963 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 77, 22

Conread position: 4-192
Cow position: chr11:25165254-25165441 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 132

Conread position: 4-199
Cow position: chr11:71846534-71846333 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 131

Conread position: 4-204
Cow position: chr11:48383341-48383544 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 22

Conread position: 4-222
Cow position: chr11:42232419-42232641 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 22

Conread position: 4-223
Cow position: chr11:57171015-57170794 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 57, 21

Conread position: 4-239
Cow position: chr11:18244127-18243890 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 21, 121

Conread position: 4-243
Cow position: chr11:47639216-47638971 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 46

Conread position: 4-248
Cow position: chr11:61859085-61858842 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 22, 65

Conread position: 4-249
Cow position: chr11:24937476-24937727 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 4-260
Cow position: chr11:49231688-49231946 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 4-260
Cow position: chr11:57725014-57724752 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 172
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 141

Conread position: 4-271
Cow position: chr11:47544942-47545215 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 209

Conread position: 4-273
Cow position: chr11:27764967-27765239 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 68

Conread position: 4-274
Cow position: chr11:11232643-11232369 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 22, 120

Conread position: 4-274
Cow position: chr11:80520783-80521037 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 182
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 62

Conread position: 4-278
Cow position: chr11:35874180-35873912 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 124

Conread position: 4-281
Cow position: chr11:41809663-41809399 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 84

Conread position: 4-282
Cow position: chr11:25386875-25387163 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 4-282
Cow position: chr11:44234165-44234450 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 189
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 4-283
Cow position: chr11:8840926-8840660 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 83

Conread position: 4-283
Cow position: chr11:19592183-19591899 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 22, 145

Conread position: 4-283
Cow position: chr11:23128729-23128444 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 60, 31

Conread position: 4-283
Cow position: chr11:23232699-23232424 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 53, 22

Conread position: 4-283
Cow position: chr11:33414048-33414332 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 192
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 32

Conread position: 4-283
Cow position: chr11:34113077-34113361 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 4-283
Cow position: chr11:42016824-42016544 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 26, 161

Conread position: 4-283
Cow position: chr11:61454720-61454421 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 22, 114

Conread position: 4-283
Cow position: chr11:68910037-68909760 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 22

Conread position: 4-283
Cow position: chr11:69119114-69119389 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 188
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 64

Conread position: 4-283
Cow position: chr11:72375874-72375580 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 22, 0

Conread position: 4-283
Cow position: chr11:80761569-80761282 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 190
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 214

Conread position: 4-288
Cow position: chr11:30879494-30879766 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 22, 97

Conread position: 4-289
Cow position: chr11:12950135-12949848 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 196
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 67

Conread position: 4-290
Cow position: chr11:3233895-3234179 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 102

Conread position: 4-291
Cow position: chr11:2907707-2907426 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 131

Conread position: 4-291
Cow position: chr11:48272009-48272305 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 22, 0

Conread position: 4-291
Cow position: chr11:50153004-50152708 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 4-291
Cow position: chr11:83066309-83066592 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 57, 22

Conread position: 4-292
Cow position: chr11:8525299-8525012 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 194
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 22, 138

Conread position: 4-295
Cow position: chr11:43897952-43898247 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 76

Conread position: 4-298
Cow position: chr11:7590005-7590300 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 205

Conread position: 4-323
Cow position: chr11:65409343-65409022 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 230
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 21, 126

Conread position: 4-327
Cow position: chr11:24601785-24602113 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 227
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 26, 119

Conread position: 4-338
Cow position: chr11:36647175-36647491 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 240
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 22, 100

Conread position: 4-340
Cow position: chr11:67236222-67236545 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 225
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 128

Conread position: 4-340
Cow position: chr11:69810718-69811047 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 234
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 22, 83

Conread position: 4-343
Cow position: chr11:55761692-55762026 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 64

Conread position: 4-346
Cow position: chr11:55052697-55053035 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 229
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 83

Conread position: 4-349
Cow position: chr11:64044053-64044392 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 230
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 21, 136

Conread position: 4-350
Cow position: chr11:12111653-12111300 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 221

Conread position: 4-350
Cow position: chr11:17227834-17227475 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 244
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 26, 102

Conread position: 4-350
Cow position: chr11:18698689-18699046 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 4-350
Cow position: chr11:41271953-41272294 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 61

Conread position: 4-350
Cow position: chr11:63434244-63433890 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 131

Conread position: 5-192
Cow position: chr11:36672235-36672039 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 21, 137

Conread position: 5-288
Cow position: chr11:5031962-5031675 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 200

Conread position: 5-291
Cow position: chr11:45898240-45897946 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 21, 129

Conread position: 5-295
Cow position: chr11:15373664-15373948 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 214
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 21, 99

Conread position: 6-350
Cow position: chr11:69402434-69402095 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 230
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 23, 65

Conread position: 8-283
Cow position: chr11:23586452-23586734 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 5, 103

Conread position: 8-283
Cow position: chr11:70086140-70086428 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 18, 239

Conread position: 8-349
Cow position: chr11:13043329-13042973 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 23

Conread position: 9-192
Cow position: chr11:81605446-81605633 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 14

Conread position: 9-267
Cow position: chr11:60143482-60143224 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 35

Conread position: 9-271
Cow position: chr11:62225806-62226070 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 8

Conread position: 10-186
Cow position: chr11:47109787-47109972 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 10-290
Cow position: chr11:82940804-82940523 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 213
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 15, 78

Conread position: 10-291
Cow position: chr11:38577951-38577674 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 46, 16

Conread position: 10-291
Cow position: chr11:65826921-65826646 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 16, 134

Conread position: 10-300
Cow position: chr11:36799486-36799194 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 214
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 15, 127

Conread position: 10-338
Cow position: chr11:59366261-59365930 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 221
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 124

Conread position: 10-353
Cow position: chr11:16233118-16232775 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 98

Conread position: 11-186
Cow position: chr11:41577195-41577021 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 19, 135

Conread position: 11-203
Cow position: chr11:9088484-9088291 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 8

Conread position: 11-203
Cow position: chr11:48697265-48697464 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 96

Conread position: 11-213
Cow position: chr11:67207564-67207755 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 15

Conread position: 11-223
Cow position: chr11:2811910-2811694 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 19, 80

Conread position: 11-262
Cow position: chr11:38670501-38670756 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 171

Conread position: 11-265
Cow position: chr11:62880808-62880554 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 45, 96

Conread position: 11-271
Cow position: chr11:21438034-21438292 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 15, 124

Conread position: 11-283
Cow position: chr11:26483532-26483801 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 15, 122

Conread position: 11-283
Cow position: chr11:36848745-36849012 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 136

Conread position: 11-283
Cow position: chr11:63202422-63202153 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 183
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 137, 33

Conread position: 11-284
Cow position: chr11:46746448-46746734 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 50, 70

Conread position: 11-288
Cow position: chr11:73512610-73512342 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 15

Conread position: 11-291
Cow position: chr11:48474521-48474810 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 11-291
Cow position: chr11:71501314-71501029 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 45, 15

Conread position: 11-291
Cow position: chr11:77128481-77128765 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 218
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 45, 15

Conread position: 11-292
Cow position: chr11:11557986-11558277 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 191
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 11-300
Cow position: chr11:8148078-8147786 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 74

Conread position: 11-301
Cow position: chr11:82108071-82107783 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 13, 24

Conread position: 11-302
Cow position: chr11:59872748-59873043 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 14, 190

Conread position: 11-319
Cow position: chr11:38845438-38845140 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 59

Conread position: 11-331
Cow position: chr11:13040339-13040026 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 68, 20

Conread position: 11-340
Cow position: chr11:18144992-18144673 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 227
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 8

Conread position: 11-343
Cow position: chr11:47193341-47193663 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 226
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 15, 59

Conread position: 11-343
Cow position: chr11:77682985-77683321 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 15, 74

Conread position: 11-343
Cow position: chr11:77745437-77745080 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 239
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 15, 121

Conread position: 11-343
Cow position: chr11:78381233-78380900 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 242
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 15

Conread position: 11-346
Cow position: chr11:2083961-2084317 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 251
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 24, 219

Conread position: 11-346
Cow position: chr11:64029439-64029095 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 233
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 80

Conread position: 11-349
Cow position: chr11:48544256-48544611 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 246
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 19

Conread position: 11-350
Cow position: chr11:5648581-5648895 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 223
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 15, 45

Conread position: 11-350
Cow position: chr11:9270909-9270562 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 126

Conread position: 11-350
Cow position: chr11:14470188-14470537 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 246
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 15, 117

Conread position: 11-350
Cow position: chr11:18484346-18484025 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 90

Conread position: 11-350
Cow position: chr11:35881729-35882067 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 226
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 15, 129

Conread position: 11-350
Cow position: chr11:63469700-63470034 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 219
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 124, 12

Conread position: 12-177
Cow position: chr11:58459939-58460101 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 76

Conread position: 12-183
Cow position: chr11:71455610-71455788 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 157

Conread position: 12-189
Cow position: chr11:32609822-32610000 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 134

Conread position: 12-204
Cow position: chr11:37347296-37347495 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 12-207
Cow position: chr11:38810528-38810329 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 177

Conread position: 12-212
Cow position: chr11:2309693-2309898 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 14, 24

Conread position: 12-213
Cow position: chr11:18210526-18210322 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 18, 133

Conread position: 12-244
Cow position: chr11:18341216-18340984 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 54

Conread position: 12-283
Cow position: chr11:14308460-14308734 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 192
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 65

Conread position: 12-283
Cow position: chr11:46748044-46747765 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 14, 105

Conread position: 12-283
Cow position: chr11:83230570-83230305 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 13, 18

Conread position: 12-283
Cow position: chr11:83687608-83687338 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 177
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 122, 14

Conread position: 12-297
Cow position: chr11:33310789-33311088 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 114

Conread position: 12-298
Cow position: chr11:34145094-34144813 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 214
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 14, 183

Conread position: 12-298
Cow position: chr11:61958927-61958635 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 113

Conread position: 12-320
Cow position: chr11:36112241-36112564 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 230
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 14, 140

Conread position: 12-338
Cow position: chr11:73354235-73353903 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 123

Conread position: 12-343
Cow position: chr11:30639126-30638783 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 118

Conread position: 12-343
Cow position: chr11:34467417-34467731 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 233
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 58

Conread position: 12-344
Cow position: chr11:38236062-38236415 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 245
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 11, 0

Conread position: 12-346
Cow position: chr11:39462440-39462791 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 239
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 14, 0

Conread position: 12-346
Cow position: chr11:70484037-70483679 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 51, 11

Conread position: 12-350
Cow position: chr11:15772900-15772537 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 252
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 14, 191

Conread position: 12-350
Cow position: chr11:63157090-63156768 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 223
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 14, 136

Conread position: 13-169
Cow position: chr11:43914033-43914197 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 13-174
Cow position: chr11:21819625-21819454 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 13-186
Cow position: chr11:63516647-63516826 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 13-212
Cow position: chr11:6154237-6154433 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 56, 10

Conread position: 13-212
Cow position: chr11:17112811-17112608 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 13, 57

Conread position: 13-224
Cow position: chr11:18591609-18591397 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 51, 10

Conread position: 13-237
Cow position: chr11:30596808-30597043 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 13-245
Cow position: chr11:18588755-18588528 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 124, 10

Conread position: 13-245
Cow position: chr11:30764305-30764548 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 10

Conread position: 13-270
Cow position: chr11:7394962-7395212 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 95

Conread position: 13-274
Cow position: chr11:50778194-50778454 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 127

Conread position: 13-275
Cow position: chr11:44036539-44036807 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 183

Conread position: 13-275
Cow position: chr11:48496765-48496505 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 176
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 10

Conread position: 13-275
Cow position: chr11:55333734-55333997 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 51, 10

Conread position: 13-276
Cow position: chr11:64638712-64638437 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 38, 199

Conread position: 13-282
Cow position: chr11:42044165-42043902 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 59, 10

Conread position: 13-283
Cow position: chr11:18086513-18086252 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 93

Conread position: 13-283
Cow position: chr11:34032382-34032103 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 201
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 13, 205

Conread position: 13-283
Cow position: chr11:35684674-35684405 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 13, 133

Conread position: 13-283
Cow position: chr11:40573511-40573240 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 10

Conread position: 13-283
Cow position: chr11:59902711-59902986 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 13, 255

Conread position: 13-285
Cow position: chr11:17321483-17321747 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 48, 10

Conread position: 13-288
Cow position: chr11:47004171-47004445 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 12, 22

Conread position: 13-290
Cow position: chr11:20761667-20761944 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 13, 207

Conread position: 13-290
Cow position: chr11:67747105-67747385 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 13, 243

Conread position: 13-291
Cow position: chr11:17831396-17831118 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 64, 10

Conread position: 13-291
Cow position: chr11:22978044-22977770 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 13, 74

Conread position: 13-291
Cow position: chr11:28643908-28644192 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 51, 5

Conread position: 13-291
Cow position: chr11:65157589-65157301 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 189
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 48, 10

Conread position: 13-291
Cow position: chr11:70836550-70836272 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 32

Conread position: 13-291
Cow position: chr11:71493035-71492757 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 33, 10

Conread position: 13-291
Cow position: chr11:80923503-80923220 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 13, 202

Conread position: 13-294
Cow position: chr11:9837281-9836995 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 17, 170

Conread position: 13-297
Cow position: chr11:56654372-56654668 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 44, 12

Conread position: 13-302
Cow position: chr11:3393388-3393094 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 17, 32

Conread position: 13-302
Cow position: chr11:39118581-39118873 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 118, 10

Conread position: 13-308
Cow position: chr11:29960127-29960414 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 124, 51

Conread position: 13-320
Cow position: chr11:4663223-4662908 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 214
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 51, 16

Conread position: 13-323
Cow position: chr11:13499833-13500163 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 17, 172

Conread position: 13-330
Cow position: chr11:61427428-61427729 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 43, 94

Conread position: 13-337
Cow position: chr11:81611590-81611911 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 215
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 13, 89

Conread position: 13-343
Cow position: chr11:30354892-30355215 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 230
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 43, 10

Conread position: 13-346
Cow position: chr11:35580078-35580433 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 228
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 13-346
Cow position: chr11:44818922-44819255 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 221
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 10

Conread position: 13-347
Cow position: chr11:2917765-2917420 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 235
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 0

Conread position: 13-349
Cow position: chr11:41004-41345 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 226
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 58

Conread position: 13-350
Cow position: chr11:21844312-21843963 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 252
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 13, 105

Conread position: 13-350
Cow position: chr11:44031823-44032182 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 244
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 13, 91

Conread position: 13-350
Cow position: chr11:45631939-45631604 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 239
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 48, 10

Conread position: 13-350
Cow position: chr11:47899102-47899426 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 229
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 51, 10

Conread position: 13-350
Cow position: chr11:52297400-52297047 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 242
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 151

Conread position: 13-350
Cow position: chr11:74316534-74316882 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 233
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 56, 146

Conread position: 14-282
Cow position: chr11:30954820-30955095 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 13, 0

Conread position: 14-283
Cow position: chr11:13592558-13592831 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 12, 78

Conread position: 14-291
Cow position: chr11:34646413-34646694 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 74

Conread position: 14-291
Cow position: chr11:80530187-80530463 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 12, 124

Conread position: 14-296
Cow position: chr11:17278844-17278567 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 12, 92

Conread position: 14-350
Cow position: chr11:56821430-56821086 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 245
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 42, 9

Conread position: 15-202
Cow position: chr11:52936084-52935898 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 35

Conread position: 15-340
Cow position: chr11:26144270-26143929 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 19, 102

Conread position: 15-350
Cow position: chr11:42358944-42359269 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 244
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 47, 14

Conread position: 16-224
Cow position: chr11:21798767-21798966 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 10, 75

Conread position: 16-275
Cow position: chr11:3833529-3833276 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 10, 90

Conread position: 16-282
Cow position: chr11:63909834-63909572 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 203
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 9, 76

Conread position: 16-297
Cow position: chr11:85294071-85294352 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 192
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 87

Conread position: 17-186
Cow position: chr11:62965728-62965549 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 19-218
Cow position: chr11:24585006-24585212 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 162
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 37, 0

Conread position: 19-282
Cow position: chr11:76606510-76606767 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 8, 47

Conread position: 19-327
Cow position: chr11:62490263-62490577 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 204
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 7

Conread position: 19-330
Cow position: chr11:30830789-30830462 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 7, 0

Conread position: 19-338
Cow position: chr11:71008962-71009271 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 239
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 7, 103

Conread position: 19-350
Cow position: chr11:67600609-67600954 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 20-350
Cow position: chr11:53778443-53778796 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 21-291
Cow position: chr11:16907214-16906946 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 117

Conread position: 22-176
Cow position: chr11:35148991-35149150 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 123

Conread position: 23-203
Cow position: chr11:38193986-38194173 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 23-218
Cow position: chr11:40486104-40485904 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 98

Conread position: 23-223
Cow position: chr11:36113989-36114192 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 113

Conread position: 23-247
Cow position: chr11:41176118-41175889 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 0

Conread position: 23-274
Cow position: chr11:31352738-31352465 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 23-283
Cow position: chr11:18509187-18508935 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 122

Conread position: 23-291
Cow position: chr11:77319244-77319517 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 177
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 270

Conread position: 23-346
Cow position: chr11:41134234-41133908 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 219
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 40, 196

Conread position: 23-348
Cow position: chr11:17889895-17889553 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 238
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 42, 99

Conread position: 23-350
Cow position: chr11:75874920-75874596 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 102

Conread position: 23-351
Cow position: chr11:30209989-30209646 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 234
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 27, 53

Conread position: 24-211
Cow position: chr11:30543450-30543643 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 32, 118

Conread position: 24-277
Cow position: chr11:16540695-16540952 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 57

Conread position: 24-283
Cow position: chr11:8545180-8544922 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 32, 54

Conread position: 24-283
Cow position: chr11:84385805-84385543 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 32, 171

Conread position: 24-291
Cow position: chr11:40479022-40478750 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 115

Conread position: 24-292
Cow position: chr11:67804584-67804846 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 203
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 32, 103

Conread position: 25-222
Cow position: chr11:56349182-56348988 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 119

Conread position: 25-285
Cow position: chr11:35775172-35775436 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 180
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 37, 144

Conread position: 25-323
Cow position: chr11:64904830-64905127 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 31, 139

Conread position: 26-340
Cow position: chr11:62663387-62663076 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 217
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 12, 98

Conread position: 27-350
Cow position: chr11:32439114-32438796 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 215
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 54, 93

Conread position: 28-338
Cow position: chr11:80756947-80756626 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 276

Conread position: 28-350
Cow position: chr11:64048255-64048566 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 230
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 28, 76

Conread position: 29-186
Cow position: chr11:62045234-62045395 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 29-198
Cow position: chr11:65843256-65843086 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 149

Conread position: 29-202
Cow position: chr11:63499486-63499311 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 107

Conread position: 29-291
Cow position: chr11:44636920-44636650 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 35, 0

Conread position: 29-348
Cow position: chr11:42296780-42296453 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 217
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 40, 111

Conread position: 29-349
Cow position: chr11:43646570-43646255 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 225
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 52, 39

Conread position: 29-350
Cow position: chr11:27746762-27747094 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 222
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 107

Conread position: 29-350
Cow position: chr11:48295870-48296201 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 35, 61

Conread position: 30-153
Cow position: chr11:86894514-86894643 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 30-283
Cow position: chr11:77705599-77705846 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 111, 35

Conread position: 30-291
Cow position: chr11:66572663-66572396 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 175

Conread position: 32-239
Cow position: chr11:65445007-65444791 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 32-350
Cow position: chr11:71390723-71390398 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 226
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 29, 208

Conread position: 34-318
Cow position: chr11:48306499-48306223 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 28, 39

Conread position: 35-155
Cow position: chr11:36362041-36361917 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 35-214
Cow position: chr11:14094579-14094394 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 181

Conread position: 35-234
Cow position: chr11:21428150-21427945 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 35-275
Cow position: chr11:45434930-45435168 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 70

Conread position: 35-283
Cow position: chr11:6202290-6202539 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 27, 99

Conread position: 35-290
Cow position: chr11:50072794-50073039 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 41

Conread position: 35-326
Cow position: chr11:49934892-49934591 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 35-334
Cow position: chr11:39499202-39499515 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 215
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 48

Conread position: 35-340
Cow position: chr11:81162589-81162281 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 194
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 246

Conread position: 35-346
Cow position: chr11:40395283-40395608 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 216
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 80

Conread position: 35-346
Cow position: chr11:51729132-51729446 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 64

Conread position: 35-350
Cow position: chr11:55494523-55494840 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 26, 74

Conread position: 36-283
Cow position: chr11:63435362-63435616 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 20, 175

Conread position: 36-291
Cow position: chr11:63917622-63917370 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 21, 74

Conread position: 37-343
Cow position: chr11:28993886-28993579 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 122

Conread position: 39-291
Cow position: chr11:70838442-70838185 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 73, 189

Conread position: 39-343
Cow position: chr11:71806296-71805997 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 216
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 20, 105

Conread position: 41-283
Cow position: chr11:17493328-17493577 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 21, 68

Conread position: 41-286
Cow position: chr11:6245171-6245413 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 19, 99

Conread position: 42-193
Cow position: chr11:65435704-65435860 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 121

Conread position: 42-283
Cow position: chr11:45742232-45742469 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 45

Conread position: 42-283
Cow position: chr11:86720561-86720322 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 14, 48

Conread position: 42-345
Cow position: chr11:85703558-85703860 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 204
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 91

Conread position: 43-291
Cow position: chr11:372840-372606 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 43-343
Cow position: chr11:55744327-55744638 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 205
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 240, 45

Conread position: 43-346
Cow position: chr11:49148897-49149218 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 88, 19

Conread position: 44-350
Cow position: chr11:21852450-21852140 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 50

Conread position: 45-350
Cow position: chr11:49057256-49057559 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 222
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 16, 164

Conread position: 46-192
Cow position: chr11:85764797-85764940 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 50-183
Cow position: chr11:10837670-10837530 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 50-201
Cow position: chr11:18066967-18066814 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 86, 18

Conread position: 50-248
Cow position: chr11:16262167-16261964 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 12, 82

Conread position: 50-268
Cow position: chr11:48672576-48672793 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 80, 22

Conread position: 50-278
Cow position: chr11:70745665-70745444 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 140, 37

Conread position: 50-313
Cow position: chr11:71868742-71868476 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 92, 0

Conread position: 50-338
Cow position: chr11:62788988-62789291 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 205
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 50-348
Cow position: chr11:70756343-70756648 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 221
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 97, 67

Conread position: 50-350
Cow position: chr11:9368689-9368982 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 210
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 81, 24

Conread position: 51-290
Cow position: chr11:69075768-69076012 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 13, 141

Conread position: 52-224
Cow position: chr11:67136569-67136389 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 41, 28

Conread position: 54-283
Cow position: chr11:71807705-71807471 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 81, 123

Conread position: 55-189
Cow position: chr11:18399460-18399326 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 100
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 55-203
Cow position: chr11:51626831-51626980 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 55-203
Cow position: chr11:62979355-62979506 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 55-239
Cow position: chr11:53462810-53462994 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 55-287
Cow position: chr11:67246659-67246884 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 85, 104

Conread position: 55-289
Cow position: chr11:69977844-69978071 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 55-333
Cow position: chr11:83397772-83398066 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 192
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 55-346
Cow position: chr11:26117853-26117562 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 189
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 120

Conread position: 55-347
Cow position: chr11:48659798-48660103 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 86, 0

Conread position: 55-347
Cow position: chr11:50472182-50472491 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 31, 127

Conread position: 55-350
Cow position: chr11:27907660-27907946 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 208
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 230, 73

Conread position: 55-350
Cow position: chr11:43360916-43360611 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 87, 138

Conread position: 55-350
Cow position: chr11:61348756-61349027 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 231, 73

Conread position: 55-353
Cow position: chr11:57873696-57873987 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 190, 83

Conread position: 56-202
Cow position: chr11:83000667-83000518 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 82, 143

Conread position: 56-243
Cow position: chr11:35791944-35791766 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 56-260
Cow position: chr11:40794483-40794279 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 51

Conread position: 56-283
Cow position: chr11:83925918-83926138 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 122, 0

Conread position: 56-291
Cow position: chr11:70278240-70278008 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 229, 85

Conread position: 56-340
Cow position: chr11:7460747-7460460 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 189
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 81, 208

Conread position: 56-350
Cow position: chr11:65495458-65495168 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 204
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 230, 86

Conread position: 57-291
Cow position: chr11:48428974-48429221 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 234

Conread position: 58-350
Cow position: chr11:31506715-31507004 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 10

Conread position: 59-294
Cow position: chr11:249615-249376 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 9, 225

Conread position: 60-283
Cow position: chr11:261391-261172 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 60-294
Cow position: chr11:21497393-21497629 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 61-275
Cow position: chr11:49873015-49872800 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 152

Conread position: 61-283
Cow position: chr11:47837186-47837415 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 56, 129

Conread position: 61-283
Cow position: chr11:52690649-52690426 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 68, 151

Conread position: 61-291
Cow position: chr11:40608724-40608490 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 154

Conread position: 61-291
Cow position: chr11:64868142-64867917 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 70, 0

Conread position: 61-291
Cow position: chr11:70206196-70206422 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 92, 21

Conread position: 61-319
Cow position: chr11:20602102-20602363 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 84, 45

Conread position: 62-246
Cow position: chr11:81168158-81167967 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 62-247
Cow position: chr11:42003070-42002888 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 70, 0

Conread position: 62-346
Cow position: chr11:27719449-27719167 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 212
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 51, 70

Conread position: 62-347
Cow position: chr11:86132578-86132295 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 188
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 221, 59

Conread position: 63-283
Cow position: chr11:65767072-65767295 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 63-319
Cow position: chr11:47772517-47772259 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 81, 20

Conread position: 63-346
Cow position: chr11:13940066-13940359 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 70

Conread position: 63-350
Cow position: chr11:23407336-23407636 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 90, 0

Conread position: 63-350
Cow position: chr11:83032558-83032853 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 193
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 210, 27

Conread position: 64-285
Cow position: chr11:3739829-3740051 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 150
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 80, 24

Conread position: 68-274
Cow position: chr11:6194085-6194293 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 60

Conread position: 68-282
Cow position: chr11:33345323-33345541 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 81, 0

Conread position: 68-283
Cow position: chr11:72333472-72333684 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 68-350
Cow position: chr11:63920169-63919891 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 243, 51

Conread position: 68-350
Cow position: chr11:70978847-70978559 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 208
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 182, 29

Conread position: 69-290
Cow position: chr11:375335-375561 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 54, 64

Conread position: 71-282
Cow position: chr11:63999207-63998997 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 112

Conread position: 72-350
Cow position: chr11:17036646-17036356 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 187
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 60

Conread position: 74-283
Cow position: chr11:64009605-64009820 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 166

Conread position: 74-285
Cow position: chr11:28395355-28395574 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 154

Conread position: 74-294
Cow position: chr11:32398524-32398742 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 69, 21

Conread position: 74-298
Cow position: chr11:69307392-69307625 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 75-291
Cow position: chr11:3282919-3283128 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 13

Conread position: 76-283
Cow position: chr11:46952836-46953043 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 8, 66

Conread position: 77-283
Cow position: chr11:29659451-29659655 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 71, 52

Conread position: 77-350
Cow position: chr11:27722277-27722549 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 184
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 213

Conread position: 78-273
Cow position: chr11:42066750-42066950 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 22

Conread position: 78-274
Cow position: chr11:8428400-8428598 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 71, 186

Conread position: 79-278
Cow position: chr11:46592357-46592553 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 113

Conread position: 79-350
Cow position: chr11:54134181-54133931 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 80-350
Cow position: chr11:21136704-21136970 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 63, 120

Conread position: 80-350
Cow position: chr11:67871713-67871447 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 69, 97

Conread position: 83-263
Cow position: chr11:75965755-75965576 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 48, 0

Conread position: 83-283
Cow position: chr11:71341571-71341369 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 70, 0

Conread position: 83-291
Cow position: chr11:30493893-30494096 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 63, 53

Conread position: 83-318
Cow position: chr11:80820104-80819876 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 83-346
Cow position: chr11:8584215-8584487 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 183
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 162

Conread position: 83-350
Cow position: chr11:6194302-6194564 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 201, 82

Conread position: 84-291
Cow position: chr11:31227864-31228069 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 199, 34

Conread position: 87-239
Cow position: chr11:12368595-12368752 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 131
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 87-274
Cow position: chr11:4430229-4430049 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 87-274
Cow position: chr11:69652889-69652695 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 132

Conread position: 87-283
Cow position: chr11:35573590-35573396 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 87-288
Cow position: chr11:80413113-80412913 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 94, 30

Conread position: 87-291
Cow position: chr11:14466590-14466384 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 60, 44

Conread position: 87-291
Cow position: chr11:46998883-46999083 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 200, 54

Conread position: 87-313
Cow position: chr11:83033338-83033116 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 51, 122

Conread position: 87-350
Cow position: chr11:67615348-67615076 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 30

Conread position: 88-283
Cow position: chr11:6633605-6633806 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 43

Conread position: 88-283
Cow position: chr11:22499464-22499271 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 50, 34

Conread position: 88-283
Cow position: chr11:53510604-53510407 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 29, 124

Conread position: 88-291
Cow position: chr11:41293918-41293713 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 54, 0

Conread position: 88-298
Cow position: chr11:17083411-17083199 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 30

Conread position: 88-340
Cow position: chr11:30210806-30211055 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 45, 34

Conread position: 88-346
Cow position: chr11:21398859-21399110 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 154

Conread position: 88-350
Cow position: chr11:50937848-50937582 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 32

Conread position: 90-283
Cow position: chr11:7385339-7385534 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 171

Conread position: 91-274
Cow position: chr11:64406128-64406315 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 92-291
Cow position: chr11:53147635-53147429 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 38

Conread position: 92-348
Cow position: chr11:56288451-56288719 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 187, 40

Conread position: 92-350
Cow position: chr11:17676467-17676199 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 192, 46

Conread position: 93-334
Cow position: chr11:44815410-44815644 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 145

Conread position: 93-334
Cow position: chr11:62813045-62812793 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 18

Conread position: 94-338
Cow position: chr11:67912247-67911998 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 46, 128

Conread position: 95-283
Cow position: chr11:5789982-5789804 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 95-324
Cow position: chr11:63687707-63687485 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 95-350
Cow position: chr11:4199179-4199450 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 185, 114

Conread position: 96-313
Cow position: chr11:37118614-37118845 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 112, 145

Conread position: 96-318
Cow position: chr11:67312680-67312911 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 221

Conread position: 98-264
Cow position: chr11:55203550-55203383 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 98-283
Cow position: chr11:21507913-21508100 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 34

Conread position: 98-291
Cow position: chr11:4653068-4652868 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 42, 0

Conread position: 98-291
Cow position: chr11:35536497-35536691 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 115

Conread position: 98-320
Cow position: chr11:19946345-19946573 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 14

Conread position: 98-350
Cow position: chr11:41603780-41603525 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 45, 156

Conread position: 98-352
Cow position: chr11:19586364-19586617 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 197
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 40, 33

Conread position: 99-292
Cow position: chr11:7013833-7013642 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 40, 84

Conread position: 102-327
Cow position: chr11:33409347-33409110 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 181, 0

Conread position: 102-350
Cow position: chr11:72870814-72871073 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 174
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 40

Conread position: 103-341
Cow position: chr11:27565250-27565487 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 166, 28

Conread position: 103-346
Cow position: chr11:84890806-84890556 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 135

Conread position: 104-291
Cow position: chr11:22747414-22747226 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 18

Conread position: 104-291
Cow position: chr11:79019145-79018954 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 105-283
Cow position: chr11:31885635-31885818 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 16

Conread position: 105-301
Cow position: chr11:53279798-53279600 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 108

Conread position: 105-350
Cow position: chr11:41313740-41313486 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 42, 226

Conread position: 105-350
Cow position: chr11:64104913-64105169 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 69

Conread position: 108-291
Cow position: chr11:70825870-70826053 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 177, 34

Conread position: 109-350
Cow position: chr11:18785951-18785720 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 22

Conread position: 110-291
Cow position: chr11:17721883-17721698 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 110-350
Cow position: chr11:19259593-19259356 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 161
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 33, 178

Conread position: 111-338
Cow position: chr11:27449689-27449468 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 70

Conread position: 118-298
Cow position: chr11:71110821-71111005 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 118-346
Cow position: chr11:57608527-57608294 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 14, 79

Conread position: 122-350
Cow position: chr11:52402396-52402619 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 112

Conread position: 131-338
Cow position: chr11:18447549-18447337 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 133-288
Cow position: chr11:39249918-39250072 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 116, 0

Conread position: 137-346
Cow position: chr11:27462148-27461939 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 138, 72

Conread position: 141-285
Cow position: chr11:34692807-34692951 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 141-338
Cow position: chr11:77013738-77013934 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 136, 54

Conread position: 142-291
Cow position: chr11:62609560-62609709 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 143, 12

Conread position: 146-291
Cow position: chr11:897632-897777 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 146-291
Cow position: chr11:56290470-56290616 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 146-298
Cow position: chr11:34136202-34136352 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 128, 28

Conread position: 146-319
Cow position: chr11:84977400-84977220 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 146-320
Cow position: chr11:16320245-16320416 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 146-320
Cow position: chr11:35669993-35669811 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 138, 98

Conread position: 146-320
Cow position: chr11:80616202-80616370 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 147, 80

Conread position: 146-320
Cow position: chr11:82731039-82730865 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 139, 151

Conread position: 146-350
Cow position: chr11:30172268-30172475 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 138, 45

Conread position: 146-350
Cow position: chr11:63484905-63485108 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 135, 27

Conread position: 147-285
Cow position: chr11:35109578-35109441 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 79, 48

Conread position: 147-318
Cow position: chr11:29786539-29786370 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 155, 0

Conread position: 148-295
Cow position: chr11:21910666-21910518 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 145, 0

Conread position: 148-337
Cow position: chr11:58927544-58927735 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 58, 68

Conread position: 148-343
Cow position: chr11:72869857-72869672 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 68, 61

Conread position: 150-291
Cow position: chr11:53717844-53717702 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 106, 99

Conread position: 151-285
Cow position: chr11:10127698-10127564 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 129, 11

Conread position: 151-291
Cow position: chr11:58173589-58173729 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 134, 70

Conread position: 151-291
Cow position: chr11:58938781-58938638 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 132, 0

Conread position: 153-349
Cow position: chr11:18914991-18915185 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 127

Conread position: 160-350
Cow position: chr11:20205879-20205682 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 161-350
Cow position: chr11:45671394-45671204 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 119, 14

Conread position: 163-284
Cow position: chr11:3248730-3248610 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 163-327
Cow position: chr11:84764012-84764175 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 117, 46

Conread position: 166-302
Cow position: chr11:9068726-9068858 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 114, 20

Conread position: 166-350
Cow position: chr11:79884467-79884651 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 161, 121

Conread position: 167-291
Cow position: chr11:84775054-84775178 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 118, 96

Conread position: 171-350
Cow position: chr11:9699261-9699079 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 172-298
Cow position: chr11:74720709-74720835 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 172-340
Cow position: chr11:33993149-33993322 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 172-346
Cow position: chr11:15366988-15366806 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 174-350
Cow position: chr11:48900858-48900683 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 105, 0

Conread position: 175-340
Cow position: chr11:79707701-79707869 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 109, 65

Conread position: 179-350
Cow position: chr11:46784466-46784639 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 99, 35

Conread position: 181-348
Cow position: chr11:80586268-80586440 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 184-348
Cow position: chr11:29978340-29978179 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 186-350
Cow position: chr11:35276266-35276427 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 7, 119

Conread position: 187-350
Cow position: chr11:58185882-58186048 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 228-348
Cow position: chr11:3267615-3267494 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 65, 37

Conread position: 228-349
Cow position: chr11:2310116-2310242 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 57, 0

Show alignments to all cow chromosomes.