Cow genome map

Conread name: Pig1-118L19

Conread position: 1-171
Cow position: chr12:6226859-6226689 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 8

Conread position: 1-173
Cow position: chr12:44559374-44559553 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 137

Conread position: 1-183
Cow position: chr12:18021381-18021567 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 24, 146

Conread position: 1-186
Cow position: chr12:28650740-28650935 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 1-187
Cow position: chr12:38512054-38511857 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 1-193
Cow position: chr12:11583189-11583375 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 55, 14

Conread position: 1-207
Cow position: chr12:12031046-12030829 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 1-212
Cow position: chr12:8710619-8710825 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 25

Conread position: 1-212
Cow position: chr12:28011111-28010905 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 25, 124

Conread position: 1-235
Cow position: chr12:20326558-20326801 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 22, 138

Conread position: 1-271
Cow position: chr12:29995673-29995401 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 24, 136

Conread position: 1-271
Cow position: chr12:44905428-44905690 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 24, 124

Conread position: 1-275
Cow position: chr12:30662161-30661883 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 131

Conread position: 1-277
Cow position: chr12:28257266-28256987 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 146

Conread position: 1-278
Cow position: chr12:5940135-5940411 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 25, 128

Conread position: 1-283
Cow position: chr12:4341932-4341669 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 0

Conread position: 1-283
Cow position: chr12:5632086-5631807 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 189
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 22

Conread position: 1-283
Cow position: chr12:15162938-15163214 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 29, 134

Conread position: 1-283
Cow position: chr12:25320711-25320989 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 63, 134

Conread position: 1-283
Cow position: chr12:27563049-27562767 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 17, 189

Conread position: 1-283
Cow position: chr12:31947911-31948187 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 62, 25

Conread position: 1-283
Cow position: chr12:35368431-35368717 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 22

Conread position: 1-284
Cow position: chr12:18769286-18768994 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 197
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 24, 218

Conread position: 1-285
Cow position: chr12:1773879-1773584 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 198
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 40

Conread position: 1-288
Cow position: chr12:22881835-22882135 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 287

Conread position: 1-290
Cow position: chr12:20479526-20479253 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 279, 30

Conread position: 1-290
Cow position: chr12:47929003-47929281 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 23, 102

Conread position: 1-291
Cow position: chr12:24662903-24663197 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 196
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 21, 132

Conread position: 1-291
Cow position: chr12:28213306-28213591 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 115

Conread position: 1-291
Cow position: chr12:32169324-32169624 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 208
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 24, 119

Conread position: 1-291
Cow position: chr12:44517948-44517654 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 25, 87

Conread position: 1-292
Cow position: chr12:18766193-18765888 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-298
Cow position: chr12:19866030-19866333 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 212
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 25

Conread position: 1-301
Cow position: chr12:25561158-25561463 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 79

Conread position: 1-302
Cow position: chr12:37770663-37770965 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 209
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 24, 37

Conread position: 1-306
Cow position: chr12:6210369-6210056 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 90

Conread position: 1-309
Cow position: chr12:31198554-31198862 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 25, 34

Conread position: 1-313
Cow position: chr12:32714830-32715149 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 225
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 20, 141

Conread position: 1-323
Cow position: chr12:43942268-43942599 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 221
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 31

Conread position: 1-327
Cow position: chr12:41083853-41084179 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 221
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 112

Conread position: 1-330
Cow position: chr12:34385725-34385390 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 222
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 60, 205

Conread position: 1-331
Cow position: chr12:31532616-31532271 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 252
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 60, 22

Conread position: 1-343
Cow position: chr12:42181353-42180981 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-346
Cow position: chr12:34161207-34161553 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 25

Conread position: 1-346
Cow position: chr12:40910503-40910135 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 123

Conread position: 1-347
Cow position: chr12:42966788-42967146 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 195

Conread position: 1-350
Cow position: chr12:4162583-4162219 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 255
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 25, 95

Conread position: 1-350
Cow position: chr12:5635660-5635298 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 122

Conread position: 1-350
Cow position: chr12:5714416-5714772 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 237

Conread position: 1-350
Cow position: chr12:9229694-9229362 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 104

Conread position: 1-350
Cow position: chr12:18123474-18123820 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 81

Conread position: 1-350
Cow position: chr12:33851143-33851510 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 264
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 22, 101

Conread position: 1-353
Cow position: chr12:4866602-4866970 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 256
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 133

Conread position: 2-178
Cow position: chr12:46143610-46143792 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 24, 133

Conread position: 2-180
Cow position: chr12:32391634-32391820 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 2-198
Cow position: chr12:4116282-4116478 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 101

Conread position: 2-246
Cow position: chr12:12579236-12578995 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 24, 159

Conread position: 2-270
Cow position: chr12:18572430-18572686 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 62

Conread position: 2-275
Cow position: chr12:8943432-8943157 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 105

Conread position: 2-283
Cow position: chr12:11109558-11109829 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 202
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 23

Conread position: 2-283
Cow position: chr12:23574559-23574838 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 24, 84

Conread position: 2-283
Cow position: chr12:29770784-29770504 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 195

Conread position: 2-291
Cow position: chr12:31228363-31228656 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 28, 146

Conread position: 2-291
Cow position: chr12:41159379-41159671 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 92

Conread position: 2-298
Cow position: chr12:6410939-6410643 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 26

Conread position: 2-353
Cow position: chr12:48415724-48415363 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 255
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 28, 41

Conread position: 3-183
Cow position: chr12:41214532-41214346 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 96

Conread position: 3-305
Cow position: chr12:15429806-15429499 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 199
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 102

Conread position: 3-350
Cow position: chr12:47803945-47804289 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 237

Conread position: 4-186
Cow position: chr12:4182900-4182713 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 22, 133

Conread position: 4-186
Cow position: chr12:22047264-22047448 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 78

Conread position: 4-186
Cow position: chr12:25455909-25456097 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 26, 118

Conread position: 4-186
Cow position: chr12:25820638-25820452 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 52, 21

Conread position: 4-202
Cow position: chr12:30476272-30476475 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 197

Conread position: 4-212
Cow position: chr12:12178716-12178927 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 22

Conread position: 4-247
Cow position: chr12:5658281-5658038 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 133

Conread position: 4-248
Cow position: chr12:3906263-3906513 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 198

Conread position: 4-248
Cow position: chr12:38454708-38454951 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 22, 72

Conread position: 4-271
Cow position: chr12:8869085-8868819 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 15

Conread position: 4-283
Cow position: chr12:2286376-2286656 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 183
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 139

Conread position: 4-283
Cow position: chr12:33323704-33323420 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 4-285
Cow position: chr12:19691441-19691157 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 60, 19

Conread position: 4-285
Cow position: chr12:36501157-36500870 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 52, 22

Conread position: 4-287
Cow position: chr12:29969371-29969659 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 124

Conread position: 4-287
Cow position: chr12:30590571-30590846 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 211
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 27, 60

Conread position: 4-291
Cow position: chr12:19869257-19869543 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 8, 139

Conread position: 4-291
Cow position: chr12:27037654-27037366 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 22, 66

Conread position: 4-291
Cow position: chr12:44622145-44622431 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 200
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 23, 208

Conread position: 4-294
Cow position: chr12:25452653-25452360 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 60

Conread position: 4-298
Cow position: chr12:45820568-45820277 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 200
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 22, 58

Conread position: 4-305
Cow position: chr12:6241104-6241415 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 219
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 22, 121

Conread position: 4-343
Cow position: chr12:17031406-17031755 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 241
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 22, 141

Conread position: 4-343
Cow position: chr12:30194500-30194840 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 244
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 52, 22

Conread position: 4-343
Cow position: chr12:42283043-42282692 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 246
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 22, 129

Conread position: 4-346
Cow position: chr12:19508777-19508414 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 238
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 4-346
Cow position: chr12:27803255-27802908 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 67

Conread position: 4-348
Cow position: chr12:27563592-27563227 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 259
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 22, 43

Conread position: 4-349
Cow position: chr12:30170462-30170805 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 233
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 22, 31

Conread position: 4-350
Cow position: chr12:9914577-9914935 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 243
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 22, 0

Conread position: 4-350
Cow position: chr12:36544858-36544491 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 251
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 22, 270

Conread position: 4-350
Cow position: chr12:39465373-39465719 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 229
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 67

Conread position: 5-183
Cow position: chr12:19039819-19039635 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 5-217
Cow position: chr12:3568737-3568950 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 14

Conread position: 5-272
Cow position: chr12:3510359-3510617 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 21, 116

Conread position: 5-285
Cow position: chr12:35780131-35779846 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 191
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 127

Conread position: 5-334
Cow position: chr12:22515944-22515600 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 21, 44

Conread position: 7-346
Cow position: chr12:26218030-26217677 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 326

Conread position: 8-283
Cow position: chr12:37993928-37993657 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 5, 73

Conread position: 8-288
Cow position: chr12:12300726-12300997 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 207
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 178, 15

Conread position: 9-350
Cow position: chr12:33975999-33976357 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 22

Conread position: 10-350
Cow position: chr12:1889783-1889426 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 165

Conread position: 11-163
Cow position: chr12:40270293-40270145 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 15

Conread position: 11-234
Cow position: chr12:40028957-40028728 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 11-270
Cow position: chr12:6242380-6242118 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 175
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 140

Conread position: 11-276
Cow position: chr12:30438043-30438305 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 15, 83

Conread position: 11-283
Cow position: chr12:42162837-42163113 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 52, 165

Conread position: 11-288
Cow position: chr12:41473889-41474170 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 15, 109

Conread position: 11-291
Cow position: chr12:30753520-30753801 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 11-305
Cow position: chr12:6489184-6488892 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 201
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 136, 14

Conread position: 11-343
Cow position: chr12:30805652-30805999 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 11-349
Cow position: chr12:12331705-12331375 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 229
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 15, 57

Conread position: 11-350
Cow position: chr12:17881660-17882009 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 112

Conread position: 11-350
Cow position: chr12:31429772-31429438 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 182

Conread position: 11-351
Cow position: chr12:3623498-3623846 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 240
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 136, 43

Conread position: 12-189
Cow position: chr12:37536690-37536509 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 14, 131

Conread position: 12-189
Cow position: chr12:37584297-37584475 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 14

Conread position: 12-206
Cow position: chr12:24107739-24107547 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 54

Conread position: 12-222
Cow position: chr12:3055942-3056147 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 123, 11

Conread position: 12-283
Cow position: chr12:7977841-7978112 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 93

Conread position: 12-283
Cow position: chr12:29780103-29779839 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 110

Conread position: 12-283
Cow position: chr12:33457944-33458222 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 19, 192

Conread position: 12-285
Cow position: chr12:44596011-44595733 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 242

Conread position: 12-287
Cow position: chr12:2711291-2711577 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 14, 194

Conread position: 12-290
Cow position: chr12:7960776-7960503 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 14

Conread position: 12-298
Cow position: chr12:41580915-41581200 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 15, 136

Conread position: 12-330
Cow position: chr12:11056679-11057005 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 220
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 69

Conread position: 12-340
Cow position: chr12:11836032-11836376 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 79

Conread position: 12-350
Cow position: chr12:24559156-24559494 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 232
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 13, 88

Conread position: 13-149
Cow position: chr12:22261024-22260883 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 13-158
Cow position: chr12:17472424-17472274 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 64

Conread position: 13-181
Cow position: chr12:17702429-17702253 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 13-245
Cow position: chr12:28748740-28748978 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 10

Conread position: 13-248
Cow position: chr12:34673540-34673300 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 13, 112

Conread position: 13-269
Cow position: chr12:10491072-10491332 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 5, 212

Conread position: 13-271
Cow position: chr12:18964125-18963865 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 51, 10

Conread position: 13-271
Cow position: chr12:34007103-34007364 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 17, 87

Conread position: 13-274
Cow position: chr12:12304191-12304446 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 62

Conread position: 13-275
Cow position: chr12:18020659-18020924 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 8

Conread position: 13-282
Cow position: chr12:25444727-25444988 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 10

Conread position: 13-288
Cow position: chr12:24211222-24211487 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 10

Conread position: 13-289
Cow position: chr12:5905857-5906137 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 13, 30

Conread position: 13-291
Cow position: chr12:6720123-6720409 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 14, 270

Conread position: 13-298
Cow position: chr12:3950547-3950255 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 17, 99

Conread position: 13-338
Cow position: chr12:17001062-17001383 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 214
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 123

Conread position: 13-350
Cow position: chr12:1030786-1031118 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 10

Conread position: 13-350
Cow position: chr12:17879502-17879151 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 229
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 33

Conread position: 13-350
Cow position: chr12:25280691-25280349 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 233
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 114, 10

Conread position: 13-350
Cow position: chr12:30596267-30596604 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 225
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 13, 127

Conread position: 13-350
Cow position: chr12:37727942-37728283 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 17

Conread position: 13-350
Cow position: chr12:37732982-37732642 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 17

Conread position: 14-193
Cow position: chr12:24032807-24032990 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 15

Conread position: 15-217
Cow position: chr12:29921977-29921776 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 42, 17

Conread position: 16-283
Cow position: chr12:34473818-34473550 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 200
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 48, 10

Conread position: 19-186
Cow position: chr12:30227422-30227252 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 7, 78

Conread position: 19-282
Cow position: chr12:23797914-23798173 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 8, 47

Conread position: 19-291
Cow position: chr12:7000796-7000521 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 207
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 43, 7

Conread position: 19-292
Cow position: chr12:9143203-9143470 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 7, 52

Conread position: 19-334
Cow position: chr12:40110194-40110490 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 217
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 37, 7

Conread position: 19-340
Cow position: chr12:19715229-19714913 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 29

Conread position: 19-350
Cow position: chr12:4768732-4769073 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 136

Conread position: 23-173
Cow position: chr12:7191451-7191297 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 33, 54

Conread position: 23-193
Cow position: chr12:2670074-2670251 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 148

Conread position: 23-212
Cow position: chr12:44014025-44013836 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 111

Conread position: 23-298
Cow position: chr12:18518477-18518762 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 46, 72

Conread position: 23-350
Cow position: chr12:30210293-30210624 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 103

Conread position: 24-294
Cow position: chr12:6485395-6485127 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 66

Conread position: 29-199
Cow position: chr12:4122724-4122553 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 57

Conread position: 29-275
Cow position: chr12:30745533-30745783 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 174
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 61

Conread position: 29-287
Cow position: chr12:23855652-23855911 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 186

Conread position: 29-291
Cow position: chr12:17774615-17774878 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 81

Conread position: 29-291
Cow position: chr12:30919237-30919507 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 259

Conread position: 29-350
Cow position: chr12:34466196-34465864 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 273

Conread position: 30-202
Cow position: chr12:44846207-44846379 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 104

Conread position: 30-343
Cow position: chr12:12637370-12637038 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 231
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 24, 0

Conread position: 30-350
Cow position: chr12:38774422-38774091 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 124

Conread position: 31-217
Cow position: chr12:7558087-7557910 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 35, 66

Conread position: 31-274
Cow position: chr12:19507451-19507703 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 35-278
Cow position: chr12:25340336-25340599 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 21, 136

Conread position: 35-291
Cow position: chr12:15122143-15122408 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 262

Conread position: 35-327
Cow position: chr12:23916665-23916970 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 168

Conread position: 35-346
Cow position: chr12:36012788-36012462 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 214
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 105, 27

Conread position: 35-350
Cow position: chr12:20777099-20776775 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 219
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 179

Conread position: 35-350
Cow position: chr12:42879518-42879853 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 224
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 29, 79

Conread position: 36-271
Cow position: chr12:25110612-25110378 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 26, 47

Conread position: 36-350
Cow position: chr12:16543748-16543443 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 52, 29

Conread position: 37-298
Cow position: chr12:44919859-44920121 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 188
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 190

Conread position: 38-343
Cow position: chr12:27365752-27366054 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 216
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 18, 151

Conread position: 41-248
Cow position: chr12:19664702-19664492 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 15, 97

Conread position: 43-283
Cow position: chr12:28582673-28582435 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 21, 156

Conread position: 43-340
Cow position: chr12:4719778-4720088 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 223
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 19, 78

Conread position: 43-349
Cow position: chr12:24023963-24023658 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 19, 83

Conread position: 43-350
Cow position: chr12:25606537-25606842 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 205
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 87, 36

Conread position: 45-300
Cow position: chr12:46714207-46714460 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 17, 86

Conread position: 48-346
Cow position: chr12:36790975-36790663 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 211
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 13, 111

Conread position: 50-282
Cow position: chr12:4820797-4821035 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 145, 0

Conread position: 50-282
Cow position: chr12:34332954-34333184 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 88, 69

Conread position: 50-291
Cow position: chr12:4596306-4596548 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 142, 77

Conread position: 50-291
Cow position: chr12:37170105-37169863 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 14, 73

Conread position: 50-291
Cow position: chr12:46120989-46120749 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 137, 82

Conread position: 50-298
Cow position: chr12:35771178-35770932 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 169, 81

Conread position: 50-331
Cow position: chr12:15938425-15938132 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 149

Conread position: 51-264
Cow position: chr12:9894626-9894838 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 97, 79

Conread position: 51-281
Cow position: chr12:42233899-42234132 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 37

Conread position: 51-282
Cow position: chr12:25188026-25188263 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 57, 0

Conread position: 51-298
Cow position: chr12:32051355-32051597 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 96, 32

Conread position: 51-332
Cow position: chr12:23446563-23446852 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 68

Conread position: 51-350
Cow position: chr12:24116522-24116219 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 25, 92

Conread position: 52-291
Cow position: chr12:22485662-22485888 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 12, 17

Conread position: 53-270
Cow position: chr12:38184441-38184655 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 54-291
Cow position: chr12:19258124-19258361 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 73, 155

Conread position: 55-238
Cow position: chr12:18420317-18420500 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 92, 58

Conread position: 55-283
Cow position: chr12:13988217-13988443 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 55-283
Cow position: chr12:15050771-15050550 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 87, 121

Conread position: 55-291
Cow position: chr12:23836169-23836412 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 75, 64

Conread position: 56-245
Cow position: chr12:20636309-20636115 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 56-271
Cow position: chr12:22540052-22540269 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 58, 38

Conread position: 56-282
Cow position: chr12:42254514-42254741 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 88, 125

Conread position: 56-283
Cow position: chr12:3880135-3879905 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 28, 78

Conread position: 56-295
Cow position: chr12:3197123-3197354 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 71, 31

Conread position: 56-352
Cow position: chr12:31517320-31517028 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 27

Conread position: 60-248
Cow position: chr12:21911653-21911849 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 102

Conread position: 60-287
Cow position: chr12:18943807-18943578 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 87, 0

Conread position: 61-283
Cow position: chr12:15173677-15173898 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 58, 0

Conread position: 61-298
Cow position: chr12:41216032-41215793 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 68, 73

Conread position: 62-213
Cow position: chr12:13996168-13996016 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 127, 52

Conread position: 62-271
Cow position: chr12:16670118-16670329 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 81, 199

Conread position: 62-283
Cow position: chr12:45090505-45090277 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 65, 171

Conread position: 63-276
Cow position: chr12:34165441-34165650 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 83, 65

Conread position: 63-338
Cow position: chr12:17269653-17269943 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 193
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 63-348
Cow position: chr12:11587627-11587921 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 41, 50

Conread position: 63-349
Cow position: chr12:22285265-22284969 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 190, 74

Conread position: 68-277
Cow position: chr12:42174279-42174485 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 185, 68

Conread position: 68-298
Cow position: chr12:3372000-3371766 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 144

Conread position: 68-318
Cow position: chr12:7110059-7110309 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 72

Conread position: 68-327
Cow position: chr12:24032360-24032622 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 211, 35

Conread position: 68-335
Cow position: chr12:15699933-15700203 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 59, 24

Conread position: 75-291
Cow position: chr12:44733225-44733010 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 71, 8

Conread position: 78-283
Cow position: chr12:10942154-10942362 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 64, 0

Conread position: 78-285
Cow position: chr12:24152206-24152416 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 97, 205

Conread position: 79-350
Cow position: chr12:10763134-10763400 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 204, 52

Conread position: 83-285
Cow position: chr12:14131889-14131693 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 83-290
Cow position: chr12:7884808-7884600 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 64, 206

Conread position: 83-291
Cow position: chr12:30605291-30605082 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 60, 153

Conread position: 83-343
Cow position: chr12:37137649-37137406 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 64

Conread position: 83-350
Cow position: chr12:1333102-1333371 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 190

Conread position: 83-350
Cow position: chr12:26575760-26576046 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 84-287
Cow position: chr12:16056985-16056778 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 54, 167

Conread position: 87-268
Cow position: chr12:3092695-3092520 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 87-283
Cow position: chr12:31959765-31959952 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 105, 0

Conread position: 87-346
Cow position: chr12:25192930-25193191 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 188
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 51, 13

Conread position: 88-274
Cow position: chr12:40807276-40807468 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 9

Conread position: 88-294
Cow position: chr12:9767001-9766792 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 142
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 203

Conread position: 88-346
Cow position: chr12:38126648-38126371 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 88-350
Cow position: chr12:7902923-7902651 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 11

Conread position: 88-350
Cow position: chr12:37008825-37008556 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 60, 117

Conread position: 89-348
Cow position: chr12:18103731-18103465 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 57, 89

Conread position: 91-352
Cow position: chr12:21780046-21780320 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 189, 40

Conread position: 93-283
Cow position: chr12:31269034-31269228 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 46, 189

Conread position: 94-283
Cow position: chr12:16147370-16147564 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 60

Conread position: 96-290
Cow position: chr12:35241214-35241024 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 99-283
Cow position: chr12:18523453-18523644 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 100-247
Cow position: chr12:25529973-25530115 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 100-330
Cow position: chr12:30414057-30413824 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 177

Conread position: 100-349
Cow position: chr12:23939114-23939372 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 49, 0

Conread position: 101-350
Cow position: chr12:42285860-42286118 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 106-348
Cow position: chr12:4954727-4954973 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 21

Conread position: 107-350
Cow position: chr12:5680578-5680819 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 182

Conread position: 108-350
Cow position: chr12:25805232-25804991 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 34

Conread position: 110-302
Cow position: chr12:37514382-37514187 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 162

Conread position: 117-283
Cow position: chr12:7854299-7854135 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 117-350
Cow position: chr12:6687799-6688039 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 14, 152

Conread position: 120-346
Cow position: chr12:45092359-45092590 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 165, 24

Conread position: 122-282
Cow position: chr12:4134990-4135151 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 128-290
Cow position: chr12:33729733-33729564 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 7

Conread position: 128-343
Cow position: chr12:3615920-3616130 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 171
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 20, 61

Conread position: 128-350
Cow position: chr12:40158101-40157874 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 159, 16

Conread position: 132-350
Cow position: chr12:24273440-24273218 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 10, 78

Conread position: 134-283
Cow position: chr12:7920167-7920317 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 135-350
Cow position: chr12:40881982-40881769 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 133, 14

Conread position: 138-350
Cow position: chr12:29057317-29057544 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 142-289
Cow position: chr12:7457609-7457465 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 142-291
Cow position: chr12:4797233-4797383 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 142-350
Cow position: chr12:48578775-48578989 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 15, 133

Conread position: 145-309
Cow position: chr12:27357325-27357494 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 135, 34

Conread position: 146-282
Cow position: chr12:45168081-45167946 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 117, 0

Conread position: 146-283
Cow position: chr12:4793135-4793272 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 146-283
Cow position: chr12:32753451-32753588 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 146-291
Cow position: chr12:15260701-15260845 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 146-302
Cow position: chr12:33948842-33948999 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 146-323
Cow position: chr12:36994178-36994002 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 131, 0

Conread position: 146-340
Cow position: chr12:6754134-6754335 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 109, 102

Conread position: 146-346
Cow position: chr12:45002129-45001921 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 137, 120

Conread position: 146-349
Cow position: chr12:15389009-15389223 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 132, 0

Conread position: 147-302
Cow position: chr12:39663261-39663104 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 144, 0

Conread position: 149-349
Cow position: chr12:1701864-1701661 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 13

Conread position: 151-270
Cow position: chr12:43691473-43691354 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 153-346
Cow position: chr12:24166999-24166799 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 131, 0

Conread position: 156-287
Cow position: chr12:46103758-46103627 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 163-350
Cow position: chr12:43854849-43855044 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 122, 41

Conread position: 167-345
Cow position: chr12:18130475-18130660 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 176-346
Cow position: chr12:38804622-38804452 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 181-350
Cow position: chr12:6666547-6666715 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 104, 24

Conread position: 187-350
Cow position: chr12:4801345-4801507 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 90, 0

Show alignments to all cow chromosomes.