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Cow genome map

           
Conread name:
           
Pig1-118L19
        

               
Conread position:
               
1-180
               

               
Cow position:
               
chr23:38854907-38854722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr23:35254409-35254227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
63, 133
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr23:27862159-27862350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 111
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr23:3208791-3208597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 102
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr23:9595002-9594791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
29, 136
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr23:36075993-36075761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
24, 138
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr23:12050193-12050435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
23, 67
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr23:5515795-5516050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
25, 196
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr23:15710251-15709991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 141
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr23:39806700-39806964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr23:33940327-33940053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
25, 121
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr23:5706828-5707109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 81
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr23:16583081-16582794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr23:16700214-16699926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 142
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr23:18296635-18296922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 139
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr23:25675865-25675582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
139, 22
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr23:29459261-29458983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr23:33601696-33601423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr23:11129062-11129350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr23:14739276-14739566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 105
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr23:18402458-18402170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr23:27544660-27544947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 25
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr23:3282287-3282000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr23:5723371-5723659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
25, 198
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr23:25864856-25864574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 25
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr23:29034141-29034437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
23, 148
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr23:1924008-1923714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 165
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr23:1398210-1397905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
25, 108
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr23:9734242-9734538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 138
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr23:20057039-20056712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
24, 212
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr23:39775558-39775883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
25, 95
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr23:31970703-31970377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr23:4968696-4968337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
24, 138
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr23:40789813-40790159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
24, 29
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr23:534057-534421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
25, 180
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr23:1885348-1884978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr23:2502021-2501662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr23:4726614-4726987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 198
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr23:5617404-5617770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
25, 135
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr23:16881330-16880975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr23:22804551-22804917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 137
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr23:26795076-26794718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
65, 46
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr23:33569967-33570326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
25, 49
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr23:40891189-40891539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
26, 46
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr23:20781653-20781842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
2-245
               

               
Cow position:
               
chr23:16563671-16563916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 5
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr23:3191300-3191007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
2-291
               

               
Cow position:
               
chr23:4104234-4104520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
24, 43
               

               
Conread position:
               
2-291
               

               
Cow position:
               
chr23:14164571-14164272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 9
               

               
Conread position:
               
2-330
               

               
Cow position:
               
chr23:13520282-13520624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr23:40781155-40781495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 118
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr23:20171403-20171745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
19, 295
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr23:25358568-25358887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
54, 24
               

               
Conread position:
               
2-350
               

               
Cow position:
               
chr23:26949028-26949386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 139
               

               
Conread position:
               
3-191
               

               
Cow position:
               
chr23:1068483-1068292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 128
               

               
Conread position:
               
3-248
               

               
Cow position:
               
chr23:19371240-19370994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 142
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr23:4996268-4995981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
3-291
               

               
Cow position:
               
chr23:24867136-24867434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr23:18802443-18802074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 158
               

               
Conread position:
               
4-192
               

               
Cow position:
               
chr23:19979112-19978929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
22, 94
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr23:1670742-1670938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
135, 22
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr23:1803624-1803826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 87
               

               
Conread position:
               
4-223
               

               
Cow position:
               
chr23:4608547-4608325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr23:2055537-2055776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
27, 127
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr23:27290947-27290684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 134
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr23:13511567-13511829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
22, 83
               

               
Conread position:
               
4-273
               

               
Cow position:
               
chr23:3262665-3262392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
23, 202
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr23:10014370-10014633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 166
               

               
Conread position:
               
4-281
               

               
Cow position:
               
chr23:40526138-40525870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 60
               

               
Conread position:
               
4-282
               

               
Cow position:
               
chr23:37065672-37065964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr23:26632634-26632920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
22, 130
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr23:9268424-9268697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
22, 125
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr23:344343-344067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
22, 131
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr23:5426262-5426554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr23:11045318-11045607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
60, 140
               

               
Conread position:
               
4-291
               

               
Cow position:
               
chr23:2488150-2487868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
22, 67
               

               
Conread position:
               
4-291
               

               
Cow position:
               
chr23:9599328-9599618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
4-291
               

               
Cow position:
               
chr23:10554177-10553884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 127
               

               
Conread position:
               
4-291
               

               
Cow position:
               
chr23:30662793-30662515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr23:4646348-4646642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
22, 65
               

               
Conread position:
               
4-323
               

               
Cow position:
               
chr23:6244752-6244442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
22, 67
               

               
Conread position:
               
4-323
               

               
Cow position:
               
chr23:14838910-14838589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 120
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr23:19002235-19001899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 135
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr23:39752949-39753290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 103
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr23:1337470-1337116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 132
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr23:15287299-15286960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 98
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr23:40443700-40444047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 60
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr23:2282343-2281994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 136
               

               
Conread position:
               
4-350
               

               
Cow position:
               
chr23:22396614-22396261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 98
               

               
Conread position:
               
4-350
               

               
Cow position:
               
chr23:24509533-24509879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
26, 129
               

               
Conread position:
               
4-350
               

               
Cow position:
               
chr23:29242781-29243127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
22, 118
               

               
Conread position:
               
4-350
               

               
Cow position:
               
chr23:34356468-34356836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
22, 138
               

               
Conread position:
               
4-352
               

               
Cow position:
               
chr23:7845124-7845491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
23, 132
               

               
Conread position:
               
5-243
               

               
Cow position:
               
chr23:36129070-36128838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
82, 64
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr23:4972615-4972881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr23:18416216-18415940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
21, 129
               

               
Conread position:
               
5-291
               

               
Cow position:
               
chr23:3967719-3967435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
5-291
               

               
Cow position:
               
chr23:7574800-7574500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 94
               

               
Conread position:
               
8-293
               

               
Cow position:
               
chr23:21336651-21336358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
9-283
               

               
Cow position:
               
chr23:37873-38143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 90
               

               
Conread position:
               
9-285
               

               
Cow position:
               
chr23:41472452-41472739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
10-282
               

               
Cow position:
               
chr23:8911311-8911577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr23:23409579-23409887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
11-223
               

               
Cow position:
               
chr23:7402540-7402757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
15, 170
               

               
Conread position:
               
11-238
               

               
Cow position:
               
chr23:416998-417218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
11-242
               

               
Cow position:
               
chr23:1921387-1921152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
11-264
               

               
Cow position:
               
chr23:25378492-25378743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
19, 125
               

               
Conread position:
               
11-274
               

               
Cow position:
               
chr23:11845122-11845382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
11-275
               

               
Cow position:
               
chr23:6592865-6592600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
15, 189
               

               
Conread position:
               
11-276
               

               
Cow position:
               
chr23:4329841-4329567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
11-283
               

               
Cow position:
               
chr23:33711600-33711875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
19, 256
               

               
Conread position:
               
11-286
               

               
Cow position:
               
chr23:20435213-20434945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 94
               

               
Conread position:
               
11-287
               

               
Cow position:
               
chr23:36309259-36309541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
15, 170
               

               
Conread position:
               
11-289
               

               
Cow position:
               
chr23:27563871-27563584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
15, 251
               

               
Conread position:
               
11-297
               

               
Cow position:
               
chr23:6995140-6994849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 60
               

               
Conread position:
               
11-343
               

               
Cow position:
               
chr23:5603437-5603109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
11-343
               

               
Cow position:
               
chr23:38973680-38974023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
15, 211
               

               
Conread position:
               
11-346
               

               
Cow position:
               
chr23:20195076-20194739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
11-346
               

               
Cow position:
               
chr23:37224228-37223901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
11-350
               

               
Cow position:
               
chr23:13359653-13360002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
11-353
               

               
Cow position:
               
chr23:15742932-15743289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
12-190
               

               
Cow position:
               
chr23:39028619-39028803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
12-218
               

               
Cow position:
               
chr23:23113870-23114083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
12-283
               

               
Cow position:
               
chr23:10852890-10853161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
44, 19
               

               
Conread position:
               
12-283
               

               
Cow position:
               
chr23:40648885-40648616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
12-283
               

               
Cow position:
               
chr23:40778105-40778379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
14, 188
               

               
Conread position:
               
12-285
               

               
Cow position:
               
chr23:187017-187296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr23:1767669-1767950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
12-300
               

               
Cow position:
               
chr23:19774613-19774901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 128
               

               
Conread position:
               
12-350
               

               
Cow position:
               
chr23:1636117-1636463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 157
               

               
Conread position:
               
12-350
               

               
Cow position:
               
chr23:24704120-24704478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 336
               

               
Conread position:
               
12-350
               

               
Cow position:
               
chr23:29345917-29345582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 85
               

               
Conread position:
               
12-350
               

               
Cow position:
               
chr23:35177161-35177497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
13-177
               

               
Cow position:
               
chr23:18107504-18107334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 126
               

               
Conread position:
               
13-189
               

               
Cow position:
               
chr23:1321358-1321186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
13, 87
               

               
Conread position:
               
13-246
               

               
Cow position:
               
chr23:670466-670699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
133, 10
               

               
Conread position:
               
13-275
               

               
Cow position:
               
chr23:12334049-12334317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
13, 37
               

               
Conread position:
               
13-283
               

               
Cow position:
               
chr23:21452891-21452614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
13-283
               

               
Cow position:
               
chr23:26986431-26986156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
13, 97
               

               
Conread position:
               
13-291
               

               
Cow position:
               
chr23:20744749-20744472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 10
               

               
Conread position:
               
13-291
               

               
Cow position:
               
chr23:39083295-39083575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 10
               

               
Conread position:
               
13-296
               

               
Cow position:
               
chr23:13599185-13599471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 135
               

               
Conread position:
               
13-297
               

               
Cow position:
               
chr23:12091519-12091225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
13, 120
               

               
Conread position:
               
13-309
               

               
Cow position:
               
chr23:9652637-9652346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
13-319
               

               
Cow position:
               
chr23:22674603-22674270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
13, 95
               

               
Conread position:
               
13-338
               

               
Cow position:
               
chr23:3394653-3394317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
13-349
               

               
Cow position:
               
chr23:21659783-21660130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
13, 120
               

               
Conread position:
               
13-350
               

               
Cow position:
               
chr23:1583373-1583712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
13-350
               

               
Cow position:
               
chr23:18902205-18901871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
14-202
               

               
Cow position:
               
chr23:3955253-3955454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 12
               

               
Conread position:
               
14-260
               

               
Cow position:
               
chr23:30999420-30999657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 130
               

               
Conread position:
               
14-291
               

               
Cow position:
               
chr23:38455341-38455053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr23:13555591-13555313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
10, 55
               

               
Conread position:
               
15-198
               

               
Cow position:
               
chr23:26942282-26942473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
17-291
               

               
Cow position:
               
chr23:32480191-32479893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
17-298
               

               
Cow position:
               
chr23:3247429-3247718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
9, 127
               

               
Conread position:
               
19-265
               

               
Cow position:
               
chr23:4562731-4562983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
19-283
               

               
Cow position:
               
chr23:1742202-1742469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
6, 203
               

               
Conread position:
               
19-283
               

               
Cow position:
               
chr23:4966666-4966934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
19-283
               

               
Cow position:
               
chr23:5162272-5162545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
6, 189
               

               
Conread position:
               
19-283
               

               
Cow position:
               
chr23:38503268-38502992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
7, 242
               

               
Conread position:
               
19-350
               

               
Cow position:
               
chr23:8063403-8063723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
22-338
               

               
Cow position:
               
chr23:7360967-7361278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
48, 125
               

               
Conread position:
               
23-213
               

               
Cow position:
               
chr23:33153338-33153147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
41, 114
               

               
Conread position:
               
23-217
               

               
Cow position:
               
chr23:2761832-2762027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
38, 130
               

               
Conread position:
               
23-309
               

               
Cow position:
               
chr23:40844504-40844796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
23-327
               

               
Cow position:
               
chr23:18322565-18322276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
38, 118
               

               
Conread position:
               
23-330
               

               
Cow position:
               
chr23:35942066-35942372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
35, 76
               

               
Conread position:
               
23-350
               

               
Cow position:
               
chr23:20996317-20996632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
33, 112
               

               
Conread position:
               
24-285
               

               
Cow position:
               
chr23:35239203-35239468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
24-346
               

               
Cow position:
               
chr23:24984318-24984000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
25-351
               

               
Cow position:
               
chr23:20388788-20388470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
29-271
               

               
Cow position:
               
chr23:17404696-17404942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 230
               

               
Conread position:
               
29-280
               

               
Cow position:
               
chr23:34416418-34416674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
27, 106
               

               
Conread position:
               
29-283
               

               
Cow position:
               
chr23:3409047-3408789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
111, 49
               

               
Conread position:
               
29-291
               

               
Cow position:
               
chr23:21502780-21502508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
35, 66
               

               
Conread position:
               
29-298
               

               
Cow position:
               
chr23:39780618-39780886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
31-247
               

               
Cow position:
               
chr23:1647478-1647696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
25, 103
               

               
Conread position:
               
31-350
               

               
Cow position:
               
chr23:26050895-26051215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 261
               

               
Conread position:
               
35-188
               

               
Cow position:
               
chr23:1928897-1929052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
35-245
               

               
Cow position:
               
chr23:2417316-2417530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
35-291
               

               
Cow position:
               
chr23:4529020-4528755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
25, 236
               

               
Conread position:
               
35-327
               

               
Cow position:
               
chr23:35938205-35938504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
29, 51
               

               
Conread position:
               
35-349
               

               
Cow position:
               
chr23:6223853-6224162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
35-350
               

               
Cow position:
               
chr23:12363755-12363424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
36-282
               

               
Cow position:
               
chr23:30950824-30951070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
25, 50
               

               
Conread position:
               
36-346
               

               
Cow position:
               
chr23:5437134-5436810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
27, 96
               

               
Conread position:
               
39-346
               

               
Cow position:
               
chr23:28945195-28944896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
23, 103
               

               
Conread position:
               
41-346
               

               
Cow position:
               
chr23:5732419-5732732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
23, 168
               

               
Conread position:
               
42-346
               

               
Cow position:
               
chr23:11081128-11081449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
42-350
               

               
Cow position:
               
chr23:22414423-22414114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
100, 41
               

               
Conread position:
               
44-350
               

               
Cow position:
               
chr23:3890694-3890377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
12, 82
               

               
Conread position:
               
45-283
               

               
Cow position:
               
chr23:36172395-36172639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
11, 89
               

               
Conread position:
               
46-350
               

               
Cow position:
               
chr23:5795352-5795671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
18, 150
               

               
Conread position:
               
50-283
               

               
Cow position:
               
chr23:306406-306638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
50-288
               

               
Cow position:
               
chr23:39573376-39573133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
50-291
               

               
Cow position:
               
chr23:4327808-4327577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
50-291
               

               
Cow position:
               
chr23:13945917-13946162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
65, 168
               

               
Conread position:
               
50-291
               

               
Cow position:
               
chr23:22574035-22573784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
144, 81
               

               
Conread position:
               
50-301
               

               
Cow position:
               
chr23:1254571-1254822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
99, 50
               

               
Conread position:
               
50-327
               

               
Cow position:
               
chr23:21446001-21446285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
94, 160
               

               
Conread position:
               
50-346
               

               
Cow position:
               
chr23:1655776-1656085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
99, 266
               

               
Conread position:
               
50-346
               

               
Cow position:
               
chr23:3245034-3244724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
51-203
               

               
Cow position:
               
chr23:9713200-9713358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
51-350
               

               
Cow position:
               
chr23:1438176-1438473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
13, 28
               

               
Conread position:
               
52-350
               

               
Cow position:
               
chr23:3522636-3522938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
91, 22
               

               
Conread position:
               
55-270
               

               
Cow position:
               
chr23:16797923-16797703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
80, 214
               

               
Conread position:
               
55-298
               

               
Cow position:
               
chr23:5436754-5436511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
89, 47
               

               
Conread position:
               
57-288
               

               
Cow position:
               
chr23:29069552-29069319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
74, 11
               

               
Conread position:
               
58-319
               

               
Cow position:
               
chr23:6035331-6035582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
58-346
               

               
Cow position:
               
chr23:24685141-24685431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
227, 72
               

               
Conread position:
               
60-277
               

               
Cow position:
               
chr23:1701062-1701281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
61-245
               

               
Cow position:
               
chr23:19173460-19173286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
61-249
               

               
Cow position:
               
chr23:39275782-39275973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 58
               

               
Conread position:
               
62-298
               

               
Cow position:
               
chr23:38208619-38208856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
80, 173
               

               
Conread position:
               
62-346
               

               
Cow position:
               
chr23:9226168-9226465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
88, 77
               

               
Conread position:
               
63-283
               

               
Cow position:
               
chr23:11212400-11212623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
68-276
               

               
Cow position:
               
chr23:18403906-18404114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
79, 186
               

               
Conread position:
               
68-283
               

               
Cow position:
               
chr23:1222340-1222121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
68-283
               

               
Cow position:
               
chr23:1876610-1876827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
68-291
               

               
Cow position:
               
chr23:769650-769418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
73, 22
               

               
Conread position:
               
68-350
               

               
Cow position:
               
chr23:10497608-10497891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
215, 45
               

               
Conread position:
               
70-193
               

               
Cow position:
               
chr23:8379026-8378905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 61
               

               
Conread position:
               
71-271
               

               
Cow position:
               
chr23:4795075-4795273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 159
               

               
Conread position:
               
74-350
               

               
Cow position:
               
chr23:38732139-38732426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 127
               

               
Conread position:
               
77-295
               

               
Cow position:
               
chr23:2799490-2799706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
77-349
               

               
Cow position:
               
chr23:17484940-17484663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
37, 89
               

               
Conread position:
               
77-350
               

               
Cow position:
               
chr23:10416511-10416233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
7, 42
               

               
Conread position:
               
78-327
               

               
Cow position:
               
chr23:1403895-1403651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
202, 0
               

               
Conread position:
               
79-283
               

               
Cow position:
               
chr23:21309503-21309297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
6, 31
               

               
Conread position:
               
79-346
               

               
Cow position:
               
chr23:41348715-41348437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
65, 13
               

               
Conread position:
               
83-275
               

               
Cow position:
               
chr23:385398-385204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
38, 141
               

               
Conread position:
               
83-291
               

               
Cow position:
               
chr23:20002169-20002378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
64, 130
               

               
Conread position:
               
83-338
               

               
Cow position:
               
chr23:3293606-3293872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
64, 186
               

               
Conread position:
               
83-338
               

               
Cow position:
               
chr23:17486912-17486644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
87-275
               

               
Cow position:
               
chr23:4470582-4470392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
87-318
               

               
Cow position:
               
chr23:22298117-22297888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
52, 25
               

               
Conread position:
               
87-338
               

               
Cow position:
               
chr23:18286110-18286366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
51, 73
               

               
Conread position:
               
88-283
               

               
Cow position:
               
chr23:307371-307571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
88-350
               

               
Cow position:
               
chr23:283474-283207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
57, 12
               

               
Conread position:
               
88-350
               

               
Cow position:
               
chr23:35155292-35155550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
36, 140
               

               
Conread position:
               
90-350
               

               
Cow position:
               
chr23:20539304-20539574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
91-350
               

               
Cow position:
               
chr23:11751208-11750958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
47, 40
               

               
Conread position:
               
92-350
               

               
Cow position:
               
chr23:5881595-5881326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 39
               

               
Conread position:
               
95-290
               

               
Cow position:
               
chr23:35247292-35247490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
97-290
               

               
Cow position:
               
chr23:40637184-40637378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
30, 135
               

               
Conread position:
               
98-350
               

               
Cow position:
               
chr23:16961225-16961481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
100-213
               

               
Cow position:
               
chr23:39520518-39520403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
100-283
               

               
Cow position:
               
chr23:35369114-35368931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
50, 159
               

               
Conread position:
               
101-283
               

               
Cow position:
               
chr23:349018-348832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
101-346
               

               
Cow position:
               
chr23:10876328-10876574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 99
               

               
Conread position:
               
102-262
               

               
Cow position:
               
chr23:1499554-1499394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 124
               

               
Conread position:
               
102-330
               

               
Cow position:
               
chr23:1981721-1981493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
182, 39
               

               
Conread position:
               
102-343
               

               
Cow position:
               
chr23:18822925-18823172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
104-350
               

               
Cow position:
               
chr23:7709727-7709977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
105-334
               

               
Cow position:
               
chr23:30311987-30311751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
108, 8
               

               
Conread position:
               
107-283
               

               
Cow position:
               
chr23:35503723-35503888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
112-260
               

               
Cow position:
               
chr23:4916628-4916776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
113-331
               

               
Cow position:
               
chr23:3244522-3244309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
114-283
               

               
Cow position:
               
chr23:4877302-4877476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
30, 139
               

               
Conread position:
               
116-291
               

               
Cow position:
               
chr23:360746-360565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 112
               

               
Conread position:
               
126-350
               

               
Cow position:
               
chr23:23904368-23904151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
128-278
               

               
Cow position:
               
chr23:30655851-30655703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 69
               

               
Conread position:
               
128-291
               

               
Cow position:
               
chr23:26283683-26283847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
14, 114
               

               
Conread position:
               
131-283
               

               
Cow position:
               
chr23:29479853-29480001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
138, 11
               

               
Conread position:
               
136-291
               

               
Cow position:
               
chr23:1936675-1936517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
140-343
               

               
Cow position:
               
chr23:13137964-13137751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
146-291
               

               
Cow position:
               
chr23:4054196-4054339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
146-341
               

               
Cow position:
               
chr23:7696537-7696731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
23, 113
               

               
Conread position:
               
146-350
               

               
Cow position:
               
chr23:20615348-20615153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
147-332
               

               
Cow position:
               
chr23:14895694-14895511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
148-282
               

               
Cow position:
               
chr23:14569520-14569386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
148-291
               

               
Cow position:
               
chr23:3835614-3835471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
137, 61
               

               
Conread position:
               
151-298
               

               
Cow position:
               
chr23:27790001-27790147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
151-353
               

               
Cow position:
               
chr23:5799477-5799273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
81, 87
               

               
Conread position:
               
153-346
               

               
Cow position:
               
chr23:17597412-17597613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
131, 185
               

               
Conread position:
               
154-338
               

               
Cow position:
               
chr23:1194505-1194312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
155-350
               

               
Cow position:
               
chr23:22272491-22272301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
43, 125
               

               
Conread position:
               
156-344
               

               
Cow position:
               
chr23:5686633-5686445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
129, 152
               

               
Conread position:
               
157-350
               

               
Cow position:
               
chr23:22668515-22668317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
157-350
               

               
Cow position:
               
chr23:40081503-40081694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
162-326
               

               
Cow position:
               
chr23:40122556-40122727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
21, 50
               

               
Conread position:
               
163-346
               

               
Cow position:
               
chr23:21423763-21423957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
170-350
               

               
Cow position:
               
chr23:30255864-30256042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
181-350
               

               
Cow position:
               
chr23:22826427-22826258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
110, 104
               

               
Conread position:
               
182-345
               

               
Cow position:
               
chr23:26698457-26698292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
186-320
               

               
Cow position:
               
chr23:18417111-18417250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
192-350
               

               
Cow position:
               
chr23:25933181-25933343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               
Show alignments to all cow chromosomes.