Cow genome map

Conread name: Pig1-118L19

Conread position: 1-124
Cow position: chrX:25411693-25411821 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 1-177
Cow position: chrX:17908431-17908254 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 63, 10

Conread position: 1-177
Cow position: chrX:30832993-30832818 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 55, 102

Conread position: 1-177
Cow position: chrX:35969230-35969052 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 55, 22

Conread position: 1-177
Cow position: chrX:41743765-41743948 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 55, 0

Conread position: 1-183
Cow position: chrX:29055972-29056158 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 25, 80

Conread position: 1-185
Cow position: chrX:47757076-47756886 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 93

Conread position: 1-186
Cow position: chrX:4091500-4091683 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 22

Conread position: 1-186
Cow position: chrX:14924852-14925043 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 137

Conread position: 1-186
Cow position: chrX:29509591-29509395 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 1-192
Cow position: chrX:28105773-28105967 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 136

Conread position: 1-193
Cow position: chrX:42461893-42461694 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 1-195
Cow position: chrX:28157347-28157550 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 184

Conread position: 1-199
Cow position: chrX:15139692-15139492 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 25, 147

Conread position: 1-203
Cow position: chrX:41167112-41166902 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 166
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 25, 0

Conread position: 1-204
Cow position: chrX:36961488-36961702 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 26, 142

Conread position: 1-206
Cow position: chrX:25232443-25232656 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 1-210
Cow position: chrX:40116274-40116484 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 25, 117

Conread position: 1-212
Cow position: chrX:26876030-26875812 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 135

Conread position: 1-223
Cow position: chrX:14900869-14900653 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 23, 87

Conread position: 1-223
Cow position: chrX:42507794-42507568 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 23, 149

Conread position: 1-236
Cow position: chrX:842011-842250 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 22

Conread position: 1-236
Cow position: chrX:37843573-37843810 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 24, 110

Conread position: 1-240
Cow position: chrX:29876214-29875980 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 55, 27

Conread position: 1-241
Cow position: chrX:26440927-26440687 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 144

Conread position: 1-245
Cow position: chrX:45993076-45993332 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 152

Conread position: 1-246
Cow position: chrX:11313925-11313675 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 65

Conread position: 1-247
Cow position: chrX:21004534-21004788 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 112

Conread position: 1-254
Cow position: chrX:27680254-27680510 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 150, 22

Conread position: 1-270
Cow position: chrX:7571759-7572033 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 61, 22

Conread position: 1-271
Cow position: chrX:39558494-39558221 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 25

Conread position: 1-273
Cow position: chrX:18695067-18694801 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 34

Conread position: 1-275
Cow position: chrX:17794838-17795113 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 182
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 105

Conread position: 1-275
Cow position: chrX:23091734-23092003 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 210
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 25, 65

Conread position: 1-275
Cow position: chrX:36067872-36068147 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 155, 22

Conread position: 1-275
Cow position: chrX:40269337-40269624 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 1-276
Cow position: chrX:40481020-40480734 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 18, 275

Conread position: 1-278
Cow position: chrX:11082761-11082487 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 211
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 24, 86

Conread position: 1-282
Cow position: chrX:11073336-11073052 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 12, 43

Conread position: 1-282
Cow position: chrX:29680407-29680122 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 1-283
Cow position: chrX:3579797-3580084 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 25, 111

Conread position: 1-283
Cow position: chrX:12309536-12309246 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 24, 48

Conread position: 1-283
Cow position: chrX:14599382-14599672 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 22, 128

Conread position: 1-283
Cow position: chrX:20697754-20697469 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 25, 116

Conread position: 1-283
Cow position: chrX:27509167-27508886 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 221

Conread position: 1-283
Cow position: chrX:29289429-29289718 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 23, 0

Conread position: 1-283
Cow position: chrX:32820881-32821168 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 196

Conread position: 1-283
Cow position: chrX:36975802-36976091 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 196
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 106

Conread position: 1-283
Cow position: chrX:38549301-38549587 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 69

Conread position: 1-283
Cow position: chrX:42492662-42492384 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 25, 98

Conread position: 1-283
Cow position: chrX:46587670-46587961 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 31, 286

Conread position: 1-284
Cow position: chrX:7497096-7497380 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 24, 75

Conread position: 1-286
Cow position: chrX:30162849-30163149 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 198
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 250

Conread position: 1-288
Cow position: chrX:9635328-9635046 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 210
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 26, 70

Conread position: 1-288
Cow position: chrX:24259729-24259438 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 68

Conread position: 1-290
Cow position: chrX:878520-878234 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 152, 12

Conread position: 1-290
Cow position: chrX:6413897-6414187 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 196
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 210

Conread position: 1-290
Cow position: chrX:17725827-17726122 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 293

Conread position: 1-290
Cow position: chrX:47186468-47186181 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 25, 105

Conread position: 1-291
Cow position: chrX:11717930-11717634 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 7

Conread position: 1-291
Cow position: chrX:15147335-15147049 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 18

Conread position: 1-291
Cow position: chrX:31311878-31312178 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 22, 107

Conread position: 1-291
Cow position: chrX:34441599-34441303 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 217
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 25, 171

Conread position: 1-291
Cow position: chrX:43730362-43730075 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 22

Conread position: 1-292
Cow position: chrX:43527356-43527656 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 217
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 29, 164

Conread position: 1-318
Cow position: chrX:7336681-7337011 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 213
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 25, 125

Conread position: 1-327
Cow position: chrX:14275884-14275550 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 225
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 64

Conread position: 1-330
Cow position: chrX:20887793-20887443 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 186

Conread position: 1-330
Cow position: chrX:21664873-21664539 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 135

Conread position: 1-331
Cow position: chrX:27432061-27431719 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 233
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 25, 135

Conread position: 1-336
Cow position: chrX:35885877-35885525 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 243
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 10, 24

Conread position: 1-338
Cow position: chrX:1499522-1499863 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 14

Conread position: 1-338
Cow position: chrX:32420071-32420420 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 241
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 25, 123

Conread position: 1-338
Cow position: chrX:38963959-38964306 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-339
Cow position: chrX:45598751-45598399 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 244
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 24, 137

Conread position: 1-343
Cow position: chrX:42247331-42246967 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 61

Conread position: 1-343
Cow position: chrX:43779995-43779651 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 24

Conread position: 1-346
Cow position: chrX:6407401-6407761 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 251
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 34, 76

Conread position: 1-346
Cow position: chrX:11939074-11938736 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 240
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 10, 24

Conread position: 1-346
Cow position: chrX:15007301-15006942 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-346
Cow position: chrX:15545744-15546098 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 245
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 106

Conread position: 1-346
Cow position: chrX:25816043-25815682 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 253
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 139, 9

Conread position: 1-346
Cow position: chrX:33000756-33001115 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 1-347
Cow position: chrX:14973881-14973539 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 22

Conread position: 1-348
Cow position: chrX:4269214-4268851 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 243
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 24, 137

Conread position: 1-348
Cow position: chrX:34543639-34544005 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 260
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 29, 109

Conread position: 1-349
Cow position: chrX:19930508-19930843 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 239
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 24, 77

Conread position: 1-349
Cow position: chrX:20791965-20791620 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 233
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 23, 238

Conread position: 1-349
Cow position: chrX:29542366-29542008 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 235
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 134

Conread position: 1-350
Cow position: chrX:5638313-5637958 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 80

Conread position: 1-350
Cow position: chrX:6544109-6544466 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 25, 108

Conread position: 1-350
Cow position: chrX:11633531-11633903 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-350
Cow position: chrX:12249656-12250036 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 275
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 23, 79

Conread position: 1-350
Cow position: chrX:22074653-22075016 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 250
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 105

Conread position: 1-350
Cow position: chrX:23497812-23497476 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 244
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 55, 25

Conread position: 1-350
Cow position: chrX:31442969-31442618 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 87

Conread position: 1-350
Cow position: chrX:36355968-36356325 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 25, 95

Conread position: 1-351
Cow position: chrX:4043998-4043661 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 83

Conread position: 1-351
Cow position: chrX:27227976-27228351 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 150

Conread position: 2-203
Cow position: chrX:7718708-7718909 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 44, 104

Conread position: 2-223
Cow position: chrX:13265766-13265547 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 62, 24

Conread position: 2-248
Cow position: chrX:38936554-38936805 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 25, 197

Conread position: 2-283
Cow position: chrX:20340038-20339754 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 212
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 23, 123

Conread position: 2-283
Cow position: chrX:22387393-22387110 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 147

Conread position: 2-283
Cow position: chrX:34238574-34238861 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 86

Conread position: 2-287
Cow position: chrX:2786695-2786412 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 188
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 133, 24

Conread position: 2-288
Cow position: chrX:23514161-23513876 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 198

Conread position: 2-288
Cow position: chrX:33639825-33640120 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 217
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 171

Conread position: 2-291
Cow position: chrX:27394160-27393877 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 21

Conread position: 2-293
Cow position: chrX:42171446-42171146 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 215
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 246

Conread position: 2-346
Cow position: chrX:11856282-11856619 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 28, 101

Conread position: 2-348
Cow position: chrX:17231588-17231956 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 246
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 54, 21

Conread position: 2-348
Cow position: chrX:45430163-45429811 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 234
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 103

Conread position: 2-350
Cow position: chrX:9201400-9201764 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 253
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 24, 148

Conread position: 2-350
Cow position: chrX:21986438-21986080 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 236
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 24, 191

Conread position: 3-193
Cow position: chrX:42874836-42875033 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 23, 0

Conread position: 3-207
Cow position: chrX:41198959-41199165 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 18

Conread position: 3-223
Cow position: chrX:29723596-29723820 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 23, 128

Conread position: 3-245
Cow position: chrX:21642625-21642380 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 132

Conread position: 3-277
Cow position: chrX:44054656-44054936 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 23, 135

Conread position: 3-292
Cow position: chrX:42381245-42380960 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 198
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 30

Conread position: 3-316
Cow position: chrX:34401853-34402178 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 233
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 23, 163

Conread position: 4-180
Cow position: chrX:38439334-38439518 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 4-186
Cow position: chrX:28836042-28835859 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 22, 30

Conread position: 4-193
Cow position: chrX:39701086-39701274 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 62

Conread position: 4-198
Cow position: chrX:47191548-47191353 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 22, 82

Conread position: 4-203
Cow position: chrX:19188796-19188991 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 22, 31

Conread position: 4-203
Cow position: chrX:21593143-21593347 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 22, 134

Conread position: 4-212
Cow position: chrX:13785507-13785291 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 4-213
Cow position: chrX:11589732-11589518 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 168
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 0

Conread position: 4-217
Cow position: chrX:20709931-20710148 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 22, 120

Conread position: 4-231
Cow position: chrX:12405531-12405293 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 131

Conread position: 4-235
Cow position: chrX:34662993-34662754 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 19

Conread position: 4-243
Cow position: chrX:36061011-36061260 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 22, 131

Conread position: 4-245
Cow position: chrX:18485654-18485905 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 4-270
Cow position: chrX:26492862-26493132 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 22, 141

Conread position: 4-282
Cow position: chrX:5872173-5872456 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 22, 112

Conread position: 4-282
Cow position: chrX:46433342-46433630 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 26, 0

Conread position: 4-283
Cow position: chrX:6278646-6278358 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 22, 0

Conread position: 4-283
Cow position: chrX:8797107-8797389 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 197

Conread position: 4-283
Cow position: chrX:13647929-13647645 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 22, 112

Conread position: 4-283
Cow position: chrX:27174851-27175138 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 22, 183

Conread position: 4-283
Cow position: chrX:28878308-28878034 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 48, 24

Conread position: 4-283
Cow position: chrX:34411700-34411986 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 22, 0

Conread position: 4-283
Cow position: chrX:34502778-34503060 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 144

Conread position: 4-283
Cow position: chrX:40035584-40035300 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 60, 22

Conread position: 4-286
Cow position: chrX:37232269-37232550 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 23, 152

Conread position: 4-288
Cow position: chrX:3654464-3654753 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 21, 141

Conread position: 4-288
Cow position: chrX:38642117-38642394 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 192
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 22, 60

Conread position: 4-288
Cow position: chrX:44961607-44961895 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 52, 26

Conread position: 4-290
Cow position: chrX:33493634-33493925 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 20, 129

Conread position: 4-291
Cow position: chrX:619148-618861 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 132

Conread position: 4-291
Cow position: chrX:23785513-23785795 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 207
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 22, 124

Conread position: 4-291
Cow position: chrX:35542751-35543036 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 22, 187

Conread position: 4-291
Cow position: chrX:38227239-38226961 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 95

Conread position: 4-297
Cow position: chrX:10412129-10411833 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 83

Conread position: 4-297
Cow position: chrX:30543431-30543128 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 4-298
Cow position: chrX:45502008-45502300 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 76

Conread position: 4-318
Cow position: chrX:10831637-10831313 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 226
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 21, 248

Conread position: 4-320
Cow position: chrX:630450-630139 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 22, 70

Conread position: 4-320
Cow position: chrX:25338039-25338358 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 242

Conread position: 4-331
Cow position: chrX:38094667-38094321 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 245
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 20, 147

Conread position: 4-337
Cow position: chrX:17541823-17542148 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 22, 31

Conread position: 4-338
Cow position: chrX:1616188-1615849 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 199

Conread position: 4-343
Cow position: chrX:10959541-10959202 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 288

Conread position: 4-343
Cow position: chrX:45110515-45110865 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 225
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 42

Conread position: 4-346
Cow position: chrX:25207987-25207644 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 238
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 26, 120

Conread position: 4-346
Cow position: chrX:30963016-30962658 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 234
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 19

Conread position: 4-346
Cow position: chrX:37910303-37910646 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 247
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 52, 99

Conread position: 4-348
Cow position: chrX:6203415-6203740 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 230
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 59

Conread position: 4-349
Cow position: chrX:31260770-31260405 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 241
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 277

Conread position: 4-349
Cow position: chrX:40567459-40567825 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 259
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 21, 95

Conread position: 4-350
Cow position: chrX:8869546-8869183 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 245
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 23, 136

Conread position: 4-350
Cow position: chrX:11655948-11656299 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 131

Conread position: 4-350
Cow position: chrX:29601973-29601608 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 4-350
Cow position: chrX:34313889-34314242 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 241
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 39

Conread position: 4-350
Cow position: chrX:34792451-34792102 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 245
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 22, 30

Conread position: 4-350
Cow position: chrX:38218567-38218934 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 105

Conread position: 4-350
Cow position: chrX:39938663-39938317 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 231
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 52, 67

Conread position: 4-350
Cow position: chrX:41122926-41123266 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 235
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 65, 27

Conread position: 4-351
Cow position: chrX:25713653-25713997 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 235
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 77

Conread position: 5-198
Cow position: chrX:34270258-34270456 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 107

Conread position: 5-275
Cow position: chrX:23561733-23561990 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 201
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 59

Conread position: 5-278
Cow position: chrX:48236673-48236952 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 22, 141

Conread position: 5-320
Cow position: chrX:11614556-11614875 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 142

Conread position: 5-327
Cow position: chrX:42994473-42994792 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 21, 202

Conread position: 5-350
Cow position: chrX:42011140-42011482 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 237
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 21, 61

Conread position: 6-332
Cow position: chrX:13853483-13853807 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 35, 15

Conread position: 7-283
Cow position: chrX:37986092-37986365 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 55

Conread position: 7-350
Cow position: chrX:4825966-4825627 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 19, 141

Conread position: 8-334
Cow position: chrX:38853059-38853391 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 222
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 5, 16

Conread position: 9-283
Cow position: chrX:7710682-7710399 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 17, 0

Conread position: 10-193
Cow position: chrX:35681198-35681392 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 10-328
Cow position: chrX:2300791-2301103 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 121, 16

Conread position: 10-346
Cow position: chrX:20151708-20152065 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 20, 204

Conread position: 10-350
Cow position: chrX:44396883-44397232 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 252
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 56, 13

Conread position: 11-152
Cow position: chrX:35284482-35284628 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 11-182
Cow position: chrX:23970247-23970418 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 60

Conread position: 11-196
Cow position: chrX:16789979-16789803 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 53

Conread position: 11-252
Cow position: chrX:15814950-15815193 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 19, 85

Conread position: 11-269
Cow position: chrX:9161448-9161701 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 110

Conread position: 11-271
Cow position: chrX:45976783-45977054 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 178
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 11-282
Cow position: chrX:34554587-34554862 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 180
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 125

Conread position: 11-288
Cow position: chrX:34565146-34565428 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 216

Conread position: 11-291
Cow position: chrX:17888549-17888274 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 15

Conread position: 11-291
Cow position: chrX:27772098-27771821 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 15, 111

Conread position: 11-291
Cow position: chrX:34532387-34532668 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 59, 12

Conread position: 11-319
Cow position: chrX:32431490-32431794 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 15, 29

Conread position: 11-330
Cow position: chrX:46072958-46072629 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 19

Conread position: 11-333
Cow position: chrX:41068589-41068924 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 11-349
Cow position: chrX:46700959-46700650 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 12

Conread position: 11-350
Cow position: chrX:1503201-1503528 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 93

Conread position: 11-350
Cow position: chrX:7646119-7646457 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 85

Conread position: 11-350
Cow position: chrX:31436341-31436690 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 237
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 15, 97

Conread position: 12-138
Cow position: chrX:42282296-42282422 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 12-177
Cow position: chrX:9997471-9997300 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 12-177
Cow position: chrX:14003777-14003612 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 123

Conread position: 12-186
Cow position: chrX:36723225-36723046 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 11

Conread position: 12-189
Cow position: chrX:43049212-43049389 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 13, 121

Conread position: 12-202
Cow position: chrX:41992179-41991986 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 11

Conread position: 12-214
Cow position: chrX:1810295-1810089 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 84

Conread position: 12-254
Cow position: chrX:27685111-27685363 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 14, 0

Conread position: 12-262
Cow position: chrX:21566266-21566526 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 12-271
Cow position: chrX:19690085-19690343 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 59

Conread position: 12-283
Cow position: chrX:31250257-31250528 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 14, 26

Conread position: 12-285
Cow position: chrX:11085193-11084923 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 111

Conread position: 12-286
Cow position: chrX:46532642-46532352 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 13, 0

Conread position: 12-295
Cow position: chrX:20801642-20801922 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 14

Conread position: 12-298
Cow position: chrX:41879068-41878778 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 14, 83

Conread position: 12-302
Cow position: chrX:47481666-47481952 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 196
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 44, 5

Conread position: 12-327
Cow position: chrX:35288523-35288840 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 49, 82

Conread position: 12-331
Cow position: chrX:41673972-41674302 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 223
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 14, 124

Conread position: 12-338
Cow position: chrX:31340572-31340899 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 224
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 157

Conread position: 12-343
Cow position: chrX:16762630-16762982 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 248
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 89

Conread position: 12-345
Cow position: chrX:24132284-24131958 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 224
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 44, 18

Conread position: 12-350
Cow position: chrX:161280-161621 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 45

Conread position: 12-350
Cow position: chrX:35383152-35382821 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 248
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 80

Conread position: 12-350
Cow position: chrX:40789072-40789404 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 243
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 13, 58

Conread position: 13-171
Cow position: chrX:20752120-20752282 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 13-231
Cow position: chrX:1572265-1572051 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 13-243
Cow position: chrX:8917263-8917494 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 12, 22

Conread position: 13-245
Cow position: chrX:23563926-23563689 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 10

Conread position: 13-248
Cow position: chrX:26625802-26625566 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 126, 15

Conread position: 13-271
Cow position: chrX:41884549-41884284 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 13-274
Cow position: chrX:1514540-1514288 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 197
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 43, 10

Conread position: 13-275
Cow position: chrX:39546107-39545850 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 43, 87

Conread position: 13-275
Cow position: chrX:40557816-40557547 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 13, 0

Conread position: 13-283
Cow position: chrX:31252285-31252547 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 51, 10

Conread position: 13-283
Cow position: chrX:38006899-38006631 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 183
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 13, 129

Conread position: 13-283
Cow position: chrX:41027022-41027299 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 121

Conread position: 13-284
Cow position: chrX:9365809-9365535 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 112

Conread position: 13-285
Cow position: chrX:14884093-14883813 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 180
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 122

Conread position: 13-286
Cow position: chrX:16416377-16416642 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 67, 10

Conread position: 13-287
Cow position: chrX:7695615-7695893 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 10

Conread position: 13-291
Cow position: chrX:616397-616111 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 13, 0

Conread position: 13-291
Cow position: chrX:13382196-13382474 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 43, 10

Conread position: 13-298
Cow position: chrX:9416828-9416530 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 13, 175

Conread position: 13-316
Cow position: chrX:42235662-42235352 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 302

Conread position: 13-319
Cow position: chrX:32309974-32310277 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 16, 50

Conread position: 13-334
Cow position: chrX:31729308-31729642 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 232
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 13, 122

Conread position: 13-346
Cow position: chrX:1176112-1175773 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 232
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 50, 10

Conread position: 13-346
Cow position: chrX:8925566-8925897 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 131

Conread position: 13-348
Cow position: chrX:36283216-36283559 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 10

Conread position: 13-349
Cow position: chrX:39126198-39126526 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 108

Conread position: 13-350
Cow position: chrX:4398994-4399339 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 242
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 13, 74

Conread position: 13-350
Cow position: chrX:12979962-12979614 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 237
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 58

Conread position: 13-350
Cow position: chrX:22624351-22624681 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 238
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 124, 10

Conread position: 13-350
Cow position: chrX:29120913-29121242 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 10

Conread position: 13-350
Cow position: chrX:30421064-30420746 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 13, 89

Conread position: 14-291
Cow position: chrX:42873260-42873534 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 207
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 9

Conread position: 15-276
Cow position: chrX:7277788-7278044 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 195
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 100, 13

Conread position: 15-313
Cow position: chrX:19273856-19273538 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 11, 299

Conread position: 16-274
Cow position: chrX:42470073-42469810 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 89

Conread position: 17-327
Cow position: chrX:4768614-4768926 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 8, 13

Conread position: 17-350
Cow position: chrX:41526650-41526313 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 233
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 47, 6

Conread position: 17-350
Cow position: chrX:42927950-42927609 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 228
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 63

Conread position: 18-290
Cow position: chrX:29194104-29194378 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 79

Conread position: 19-188
Cow position: chrX:17497957-17498130 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 101

Conread position: 19-193
Cow position: chrX:48243590-48243416 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 52

Conread position: 19-198
Cow position: chrX:28845706-28845888 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 44, 7

Conread position: 19-213
Cow position: chrX:20790793-20790983 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 37, 115

Conread position: 19-222
Cow position: chrX:48385489-48385284 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 5, 124

Conread position: 19-277
Cow position: chrX:28134221-28134472 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 7, 36

Conread position: 19-277
Cow position: chrX:36778282-36778532 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 99

Conread position: 19-277
Cow position: chrX:43567795-43568053 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 45, 17

Conread position: 19-283
Cow position: chrX:18204592-18204323 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 7, 117

Conread position: 19-283
Cow position: chrX:45875262-45875531 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 11, 235

Conread position: 19-290
Cow position: chrX:5017543-5017275 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 7, 180

Conread position: 19-291
Cow position: chrX:5118631-5118352 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 7, 98

Conread position: 19-291
Cow position: chrX:40685460-40685181 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 5, 268

Conread position: 19-295
Cow position: chrX:7161931-7162207 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 7, 100

Conread position: 19-300
Cow position: chrX:38728608-38728892 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 214
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 129

Conread position: 19-350
Cow position: chrX:7721860-7722195 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 242
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 7, 118

Conread position: 19-350
Cow position: chrX:35413493-35413815 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 237
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 44, 7

Conread position: 21-284
Cow position: chrX:6656260-6656524 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 180
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 44, 62

Conread position: 23-176
Cow position: chrX:37048700-37048548 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 119

Conread position: 23-223
Cow position: chrX:19003176-19003373 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 121

Conread position: 23-283
Cow position: chrX:4746363-4746106 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 174
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 11

Conread position: 23-290
Cow position: chrX:31294681-31294425 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 45, 0

Conread position: 23-292
Cow position: chrX:40692875-40692604 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 58, 230

Conread position: 23-346
Cow position: chrX:17662717-17662404 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 121

Conread position: 23-350
Cow position: chrX:39415491-39415169 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 73

Conread position: 24-186
Cow position: chrX:40647864-40648029 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 24-278
Cow position: chrX:917487-917233 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 122

Conread position: 25-340
Cow position: chrX:30133437-30133109 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 228
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 110, 7

Conread position: 27-349
Cow position: chrX:6563400-6563717 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 170

Conread position: 28-245
Cow position: chrX:4296933-4296723 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 130, 8

Conread position: 28-290
Cow position: chrX:36515009-36514745 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 22

Conread position: 28-292
Cow position: chrX:5679685-5679420 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 22, 89

Conread position: 29-248
Cow position: chrX:40320287-40320511 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 92

Conread position: 29-283
Cow position: chrX:6260276-6260009 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 30, 181

Conread position: 29-283
Cow position: chrX:37781229-37780969 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 0

Conread position: 29-288
Cow position: chrX:5680053-5679785 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 69

Conread position: 29-288
Cow position: chrX:34315407-34315666 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 117, 75

Conread position: 29-291
Cow position: chrX:43115033-43115297 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 176
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 107

Conread position: 29-350
Cow position: chrX:20584206-20584533 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 258

Conread position: 29-353
Cow position: chrX:6488458-6488789 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 239
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 27, 182

Conread position: 30-208
Cow position: chrX:12018180-12018357 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 115, 9

Conread position: 30-236
Cow position: chrX:27119582-27119790 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 69

Conread position: 30-298
Cow position: chrX:26881685-26881408 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 30-323
Cow position: chrX:17630920-17630627 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 110, 261

Conread position: 31-283
Cow position: chrX:24331662-24331916 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 174
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 105

Conread position: 34-338
Cow position: chrX:34222597-34222923 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 22, 213

Conread position: 35-286
Cow position: chrX:45113505-45113764 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 21, 111

Conread position: 35-291
Cow position: chrX:38654542-38654294 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 199
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 31, 47

Conread position: 35-316
Cow position: chrX:6690370-6690085 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 213
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 7, 54

Conread position: 35-343
Cow position: chrX:9651137-9650813 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 213
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 69

Conread position: 37-275
Cow position: chrX:45670117-45670354 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 25, 58

Conread position: 37-338
Cow position: chrX:48044622-48044317 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 200
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 171

Conread position: 38-186
Cow position: chrX:8326651-8326802 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 110, 30

Conread position: 38-195
Cow position: chrX:47209236-47209398 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 108

Conread position: 38-275
Cow position: chrX:29229901-29230131 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 91

Conread position: 38-290
Cow position: chrX:4515577-4515837 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 28, 204

Conread position: 41-186
Cow position: chrX:35848455-35848607 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 55

Conread position: 41-345
Cow position: chrX:37119489-37119791 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 151

Conread position: 41-346
Cow position: chrX:37574745-37575033 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 201
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 42-242
Cow position: chrX:23583457-23583660 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 58

Conread position: 43-350
Cow position: chrX:9252264-9251942 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 222
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 9, 116

Conread position: 45-334
Cow position: chrX:46291036-46291346 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 212
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 19, 75

Conread position: 49-217
Cow position: chrX:13136327-13136158 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 49-247
Cow position: chrX:25441089-25440894 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 32, 21

Conread position: 49-283
Cow position: chrX:31489425-31489660 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 90, 69

Conread position: 49-283
Cow position: chrX:42855358-42855598 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 13, 59

Conread position: 49-327
Cow position: chrX:34837152-34836873 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 37

Conread position: 50-273
Cow position: chrX:11455143-11454919 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 177
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 14, 176

Conread position: 50-283
Cow position: chrX:151811-152040 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 77, 67

Conread position: 50-283
Cow position: chrX:5900375-5900602 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 94, 0

Conread position: 50-283
Cow position: chrX:21327812-21328053 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 89, 0

Conread position: 50-295
Cow position: chrX:47054622-47054371 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 5, 145

Conread position: 50-346
Cow position: chrX:25035473-25035164 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 234, 82

Conread position: 50-350
Cow position: chrX:25283108-25282793 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 211
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 139, 0

Conread position: 51-283
Cow position: chrX:10516160-10516393 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 35

Conread position: 52-350
Cow position: chrX:4153127-4152823 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 208
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 92, 204

Conread position: 53-169
Cow position: chrX:22376561-22376680 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 8, 35

Conread position: 54-337
Cow position: chrX:41192618-41192897 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 189
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 231, 50

Conread position: 55-270
Cow position: chrX:19162429-19162214 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 105

Conread position: 55-277
Cow position: chrX:31515080-31515308 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 52

Conread position: 55-283
Cow position: chrX:20168469-20168697 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 90, 210

Conread position: 55-291
Cow position: chrX:16348657-16348424 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 85, 146

Conread position: 55-349
Cow position: chrX:33654930-33654623 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 221
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 39, 78

Conread position: 55-350
Cow position: chrX:27705498-27705808 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 85, 66

Conread position: 56-198
Cow position: chrX:42789533-42789674 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 56-283
Cow position: chrX:37129181-37129409 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 92, 30

Conread position: 56-283
Cow position: chrX:40680523-40680754 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 83, 0

Conread position: 56-346
Cow position: chrX:27261100-27261407 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 83, 291

Conread position: 56-348
Cow position: chrX:13868615-13868923 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 206
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 91, 116

Conread position: 56-350
Cow position: chrX:40826839-40826529 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 202
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 82, 98

Conread position: 56-353
Cow position: chrX:20882025-20881736 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 86, 50

Conread position: 59-291
Cow position: chrX:22115403-22115167 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 10, 81

Conread position: 59-318
Cow position: chrX:39219994-39220254 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 60-346
Cow position: chrX:41238435-41238145 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 220, 35

Conread position: 61-283
Cow position: chrX:16575040-16575252 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 61-291
Cow position: chrX:29549630-29549403 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 78, 147

Conread position: 61-334
Cow position: chrX:29050164-29050447 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 86, 142

Conread position: 62-283
Cow position: chrX:12095855-12095632 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 85, 73

Conread position: 64-191
Cow position: chrX:6764476-6764347 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 5

Conread position: 66-283
Cow position: chrX:36866093-36866312 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 69, 195

Conread position: 68-208
Cow position: chrX:6855325-6855465 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 68-275
Cow position: chrX:23113202-23113417 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 72, 26

Conread position: 68-291
Cow position: chrX:23562559-23562779 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 80, 38

Conread position: 68-350
Cow position: chrX:6559521-6559235 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 195
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 165, 64

Conread position: 69-340
Cow position: chrX:126694-126967 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 122

Conread position: 70-343
Cow position: chrX:38208617-38208340 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 83, 56

Conread position: 70-350
Cow position: chrX:13923798-13924082 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 144, 56

Conread position: 71-291
Cow position: chrX:1466088-1466310 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 146
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 74-270
Cow position: chrX:40283056-40283248 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 75-208
Cow position: chrX:17301378-17301241 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 75-213
Cow position: chrX:43973475-43973615 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 75-291
Cow position: chrX:25036918-25037136 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 75, 0

Conread position: 75-350
Cow position: chrX:2523748-2523479 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 17

Conread position: 76-283
Cow position: chrX:41271064-41270846 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 11

Conread position: 77-275
Cow position: chrX:12082392-12082192 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 131

Conread position: 77-283
Cow position: chrX:40108583-40108378 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 122, 46

Conread position: 77-284
Cow position: chrX:15820530-15820735 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 54, 0

Conread position: 78-269
Cow position: chrX:41111655-41111838 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 80-284
Cow position: chrX:46429886-46429678 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 5, 22

Conread position: 80-350
Cow position: chrX:12437334-12437062 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 184
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 52, 132

Conread position: 83-288
Cow position: chrX:19097283-19097074 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 104, 48

Conread position: 83-348
Cow position: chrX:7648462-7648193 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 165, 54

Conread position: 84-283
Cow position: chrX:25788956-25788765 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 48

Conread position: 84-343
Cow position: chrX:27511367-27511636 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 34, 49

Conread position: 84-350
Cow position: chrX:39352720-39352993 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 54, 99

Conread position: 87-282
Cow position: chrX:169602-169407 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 63, 110

Conread position: 87-283
Cow position: chrX:2003933-2003736 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 107, 146

Conread position: 87-291
Cow position: chrX:22915093-22914893 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 197, 25

Conread position: 87-291
Cow position: chrX:31627038-31626830 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 127

Conread position: 87-339
Cow position: chrX:19469563-19469306 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 64, 55

Conread position: 88-283
Cow position: chrX:4109134-4109324 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 69, 0

Conread position: 88-290
Cow position: chrX:32623511-32623718 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 61, 184

Conread position: 88-290
Cow position: chrX:45968098-45968295 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 88-298
Cow position: chrX:32978133-32977930 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 192, 43

Conread position: 88-302
Cow position: chrX:30840488-30840706 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 24

Conread position: 88-346
Cow position: chrX:12290666-12290935 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 199, 42

Conread position: 89-283
Cow position: chrX:44339379-44339186 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 89

Conread position: 90-290
Cow position: chrX:35985764-35985963 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 42

Conread position: 90-325
Cow position: chrX:23188832-23188593 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 27, 7

Conread position: 92-291
Cow position: chrX:18964876-18964681 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 159
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 55, 12

Conread position: 92-330
Cow position: chrX:43426240-43426476 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 197

Conread position: 92-338
Cow position: chrX:29408077-29407835 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 38

Conread position: 94-210
Cow position: chrX:29115661-29115775 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 94-240
Cow position: chrX:42499099-42498951 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 47, 121

Conread position: 95-285
Cow position: chrX:19943286-19943094 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 133

Conread position: 95-350
Cow position: chrX:22393035-22392767 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 99-277
Cow position: chrX:4645957-4645779 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 99-326
Cow position: chrX:7806378-7806601 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 120

Conread position: 99-346
Cow position: chrX:27306407-27306656 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 193

Conread position: 100-291
Cow position: chrX:6599828-6599633 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 101-349
Cow position: chrX:11326143-11325888 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 52, 31

Conread position: 102-283
Cow position: chrX:29553243-29553425 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 46, 17

Conread position: 102-300
Cow position: chrX:4037218-4037020 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 146

Conread position: 103-290
Cow position: chrX:10305390-10305203 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 95

Conread position: 104-291
Cow position: chrX:40532084-40531894 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 104-317
Cow position: chrX:25441570-25441365 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 87

Conread position: 105-353
Cow position: chrX:35759978-35759732 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 184

Conread position: 106-282
Cow position: chrX:48558709-48558885 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 142, 153

Conread position: 106-350
Cow position: chrX:42893879-42894143 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 109-346
Cow position: chrX:17956660-17956906 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 175, 35

Conread position: 110-301
Cow position: chrX:27413476-27413669 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 12

Conread position: 113-292
Cow position: chrX:23498709-23498532 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 98

Conread position: 116-320
Cow position: chrX:32318275-32318492 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 117-290
Cow position: chrX:20743575-20743751 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 118-350
Cow position: chrX:42331251-42331494 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 12, 224

Conread position: 120-288
Cow position: chrX:17966319-17966486 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 123-283
Cow position: chrX:25411886-25412045 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 24, 142

Conread position: 124-283
Cow position: chrX:42450035-42449874 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 124-346
Cow position: chrX:42836164-42836398 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 160, 7

Conread position: 125-283
Cow position: chrX:42282558-42282716 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 54

Conread position: 125-350
Cow position: chrX:27075067-27074830 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 157, 16

Conread position: 131-291
Cow position: chrX:18046390-18046545 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 156, 13

Conread position: 131-346
Cow position: chrX:42432526-42432297 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 59, 94

Conread position: 132-286
Cow position: chrX:29733603-29733449 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 132-327
Cow position: chrX:20678151-20677949 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 10, 63

Conread position: 132-349
Cow position: chrX:3806671-3806898 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 148, 0

Conread position: 137-338
Cow position: chrX:35278323-35278520 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 138, 155

Conread position: 144-316
Cow position: chrX:11653765-11653941 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 149

Conread position: 144-350
Cow position: chrX:11763000-11762790 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 139, 0

Conread position: 144-350
Cow position: chrX:24054672-24054882 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 37, 146

Conread position: 144-350
Cow position: chrX:31745004-31744794 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 146-343
Cow position: chrX:4466970-4467165 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 144, 0

Conread position: 146-343
Cow position: chrX:17524381-17524169 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 134, 0

Conread position: 146-350
Cow position: chrX:16836283-16836073 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 134, 67

Conread position: 146-350
Cow position: chrX:38722124-38722318 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 32, 134

Conread position: 147-305
Cow position: chrX:22628322-22628163 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 143, 62

Conread position: 148-325
Cow position: chrX:26205443-26205258 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 136, 0

Conread position: 149-272
Cow position: chrX:37665697-37665820 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 149-283
Cow position: chrX:38301815-38301949 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 149-305
Cow position: chrX:19018825-19018666 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 135, 0

Conread position: 150-314
Cow position: chrX:31829454-31829292 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 157, 129

Conread position: 153-350
Cow position: chrX:27668948-27668741 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 131, 168

Conread position: 157-291
Cow position: chrX:23266429-23266563 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 157-343
Cow position: chrX:30824001-30824199 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 158-350
Cow position: chrX:907961-908162 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 92, 62

Conread position: 163-297
Cow position: chrX:18637509-18637648 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 163-340
Cow position: chrX:3860608-3860438 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 120, 12

Conread position: 163-346
Cow position: chrX:5026276-5026468 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 125, 0

Conread position: 171-346
Cow position: chrX:46909843-46910025 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 114, 165

Conread position: 172-350
Cow position: chrX:27415551-27415367 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 111, 145

Conread position: 175-350
Cow position: chrX:2551123-2551298 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 46, 113

Conread position: 177-350
Cow position: chrX:40116516-40116689 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 109, 34

Conread position: 179-350
Cow position: chrX:6676862-6677027 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 228-349
Cow position: chrX:20710257-20710378 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.