Cow genome map
| Conread name: | Pig1-120P12 |
| Conread position: | 207-551 |
| Cow position: | chr10:6985915-6986255 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 248 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 67, 80 |
| Conread position: | 211-596 |
| Cow position: | chr10:30523588-30523202 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 335, 30 |
| Conread position: | 219-459 |
| Cow position: | chr10:35974763-35975001 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 56, 174 |
| Conread position: | 220-551 |
| Cow position: | chr10:37311659-37311331 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 236 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 117, 164 |
| Conread position: | 220-593 |
| Cow position: | chr10:20446582-20446956 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 171 |
| Conread position: | 221-427 |
| Cow position: | chr10:38509867-38509658 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 107, 175 |
| Conread position: | 221-594 |
| Cow position: | chr10:63647518-63647126 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 106, 176 |
| Conread position: | 223-453 |
| Cow position: | chr10:8760781-8760552 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 116, 170 |
| Conread position: | 225-465 |
| Cow position: | chr10:2420361-2420119 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 40 |
| Conread position: | 225-547 |
| Cow position: | chr10:6253007-6252682 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 105 |
| Conread position: | 225-551 |
| Cow position: | chr10:46801522-46801198 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 43 |
| Conread position: | 226-402 |
| Cow position: | chr10:48370104-48369926 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 226-409 |
| Cow position: | chr10:48389953-48389767 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 101, 166 |
| Conread position: | 226-435 |
| Cow position: | chr10:49913716-49913500 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 43, 63 |
| Conread position: | 226-442 |
| Cow position: | chr10:17705363-17705580 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 111, 171 |
| Conread position: | 226-444 |
| Cow position: | chr10:32833818-32834040 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 101, 169 |
| Conread position: | 226-445 |
| Cow position: | chr10:60031828-60032050 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 105, 170 |
| Conread position: | 226-449 |
| Cow position: | chr10:36465699-36465473 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 98, 171 |
| Conread position: | 226-458 |
| Cow position: | chr10:24313381-24313151 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 226-459 |
| Cow position: | chr10:64286344-64286109 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 102, 59 |
| Conread position: | 226-462 |
| Cow position: | chr10:25757199-25757439 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 116, 171 |
| Conread position: | 226-463 |
| Cow position: | chr10:13391805-13391578 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 226-464 |
| Cow position: | chr10:6172814-6173056 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 226-464 |
| Cow position: | chr10:31385064-31385297 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 122, 139 |
| Conread position: | 226-464 |
| Cow position: | chr10:65968781-65969021 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 111, 86 |
| Conread position: | 226-467 |
| Cow position: | chr10:50609037-50609276 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 226-468 |
| Cow position: | chr10:39139460-39139700 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 226-477 |
| Cow position: | chr10:59154413-59154171 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 226-484 |
| Cow position: | chr10:54205790-54206046 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 226-506 |
| Cow position: | chr10:32174224-32174499 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 226-513 |
| Cow position: | chr10:47650598-47650889 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 106 |
| Conread position: | 226-519 |
| Cow position: | chr10:18885471-18885158 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 233 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 66, 180 |
| Conread position: | 226-529 |
| Cow position: | chr10:52341546-52341851 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 190, 134 |
| Conread position: | 226-544 |
| Cow position: | chr10:15293853-15294163 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 95 |
| Conread position: | 226-551 |
| Cow position: | chr10:10963456-10963793 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 43, 164 |
| Conread position: | 226-551 |
| Cow position: | chr10:18041662-18041991 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 166 |
| Conread position: | 226-551 |
| Cow position: | chr10:24022799-24022477 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 223 |
| Conread position: | 226-551 |
| Cow position: | chr10:29816072-29816395 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 128 |
| Conread position: | 226-551 |
| Cow position: | chr10:37819077-37818754 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 166 |
| Conread position: | 226-552 |
| Cow position: | chr10:240054-239716 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 77, 179 |
| Conread position: | 226-552 |
| Cow position: | chr10:1056439-1056104 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 93, 241 |
| Conread position: | 226-552 |
| Cow position: | chr10:6012541-6012228 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 93 |
| Conread position: | 226-552 |
| Cow position: | chr10:20367414-20367100 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 110, 43 |
| Conread position: | 226-552 |
| Cow position: | chr10:30718225-30718553 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 167 |
| Conread position: | 226-552 |
| Cow position: | chr10:53058194-53057854 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 43, 170 |
| Conread position: | 226-552 |
| Cow position: | chr10:60358211-60358540 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 170 |
| Conread position: | 226-552 |
| Cow position: | chr10:61839081-61839406 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 51 |
| Conread position: | 226-552 |
| Cow position: | chr10:62516348-62516683 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 60 |
| Conread position: | 226-560 |
| Cow position: | chr10:76880-77206 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 90 |
| Conread position: | 226-563 |
| Cow position: | chr10:48462857-48462519 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 165 |
| Conread position: | 226-572 |
| Cow position: | chr10:34660730-34660393 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 164 |
| Conread position: | 226-579 |
| Cow position: | chr10:1415723-1416071 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 165 |
| Conread position: | 226-593 |
| Cow position: | chr10:30745886-30746262 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 160 |
| Conread position: | 226-593 |
| Cow position: | chr10:54469893-54469532 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 74 |
| Conread position: | 226-595 |
| Cow position: | chr10:3984909-3985291 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 100, 134 |
| Conread position: | 226-595 |
| Cow position: | chr10:10753579-10753194 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 227, 105 |
| Conread position: | 226-595 |
| Cow position: | chr10:29278937-29279305 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 55, 176 |
| Conread position: | 226-595 |
| Cow position: | chr10:39110513-39110140 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 60 |
| Conread position: | 256-596 |
| Cow position: | chr10:50200217-50200575 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 129 |
| Conread position: | 289-595 |
| Cow position: | chr10:16598236-16598550 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 74 |
| Conread position: | 330-595 |
| Cow position: | chr10:36001793-36002062 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 60 |
| Conread position: | 406-596 |
| Cow position: | chr10:68829605-68829416 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 115, 0 |
Show alignments to all cow chromosomes.