Cow genome map
| Conread name: | Pig1-120P12 |
| Conread position: | 173-552 |
| Cow position: | chr11:4625379-4625004 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 263 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 145, 12 |
| Conread position: | 203-596 |
| Cow position: | chr11:7394618-7395012 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 11 |
| Conread position: | 210-552 |
| Cow position: | chr11:62216003-62215662 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 220-551 |
| Cow position: | chr11:37727510-37727838 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 97, 162 |
| Conread position: | 221-547 |
| Cow position: | chr11:23129062-23128732 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 239 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 242, 55 |
| Conread position: | 221-596 |
| Cow position: | chr11:17113143-17112761 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 170 |
| Conread position: | 225-373 |
| Cow position: | chr11:8552229-8552383 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 225-461 |
| Cow position: | chr11:21921660-21921899 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 93, 173 |
| Conread position: | 225-498 |
| Cow position: | chr11:7705107-7705378 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 168 |
| Conread position: | 225-551 |
| Cow position: | chr11:24601441-24601782 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 53, 239 |
| Conread position: | 225-551 |
| Cow position: | chr11:29916036-29916349 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 52 |
| Conread position: | 225-551 |
| Cow position: | chr11:83356883-83357202 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 225-596 |
| Cow position: | chr11:21798437-21798814 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 82 |
| Conread position: | 226-387 |
| Cow position: | chr11:39498592-39498748 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 226-428 |
| Cow position: | chr11:9214332-9214123 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 84 |
| Conread position: | 226-446 |
| Cow position: | chr11:82345710-82345488 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 81, 149 |
| Conread position: | 226-449 |
| Cow position: | chr11:8829363-8829138 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 106, 68 |
| Conread position: | 226-449 |
| Cow position: | chr11:81602995-81603222 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 103, 169 |
| Conread position: | 226-462 |
| Cow position: | chr11:48696695-48696935 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 98, 172 |
| Conread position: | 226-532 |
| Cow position: | chr11:259693-259386 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 43, 130 |
| Conread position: | 226-547 |
| Cow position: | chr11:48271688-48272002 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 148 |
| Conread position: | 226-550 |
| Cow position: | chr11:3393721-3393401 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 226-550 |
| Cow position: | chr11:15640981-15641307 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 232 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 103, 172 |
| Conread position: | 226-551 |
| Cow position: | chr11:17321158-17321469 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 226-551 |
| Cow position: | chr11:17831744-17831416 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 75 |
| Conread position: | 226-551 |
| Cow position: | chr11:36986455-36986773 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 170 |
| Conread position: | 226-551 |
| Cow position: | chr11:40458611-40458932 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 226-551 |
| Cow position: | chr11:43361301-43360985 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 165 |
| Conread position: | 226-551 |
| Cow position: | chr11:52463938-52464253 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 166 |
| Conread position: | 226-551 |
| Cow position: | chr11:61455048-61454723 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 167 |
| Conread position: | 226-551 |
| Cow position: | chr11:81337481-81337161 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 235 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 110, 55 |
| Conread position: | 226-552 |
| Cow position: | chr11:4731828-4732151 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 226-552 |
| Cow position: | chr11:18140722-18141050 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 173 |
| Conread position: | 226-552 |
| Cow position: | chr11:48484640-48484311 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 46, 91 |
| Conread position: | 226-552 |
| Cow position: | chr11:83403480-83403802 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 108, 172 |
| Conread position: | 226-574 |
| Cow position: | chr11:77705257-77705601 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 51 |
| Conread position: | 226-578 |
| Cow position: | chr11:75480546-75480188 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 152 |
| Conread position: | 226-594 |
| Cow position: | chr11:59430657-59430289 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 254 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 42, 172 |
| Conread position: | 226-595 |
| Cow position: | chr11:4060538-4060182 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 260, 135 |
| Conread position: | 226-595 |
| Cow position: | chr11:43644621-43644232 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 175 |
| Conread position: | 226-596 |
| Cow position: | chr11:9971469-9971100 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 106, 154 |
| Conread position: | 226-596 |
| Cow position: | chr11:22103251-22103624 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 165 |
| Conread position: | 227-505 |
| Cow position: | chr11:4406309-4406593 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 166 |
| Conread position: | 303-596 |
| Cow position: | chr11:26483302-26483584 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 231, 55 |
| Conread position: | 325-596 |
| Cow position: | chr11:61137608-61137336 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 25 |
| Conread position: | 392-594 |
| Cow position: | chr11:39034114-39034318 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 140, 58 |
Show alignments to all cow chromosomes.