Cow genome map
| Conread name: | Pig1-120P12 |
| Conread position: | 219-462 |
| Cow position: | chr13:1839896-1839647 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 117, 176 |
| Conread position: | 225-444 |
| Cow position: | chr13:22906769-22906547 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 93, 169 |
| Conread position: | 225-595 |
| Cow position: | chr13:59170035-59169667 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 117 |
| Conread position: | 226-334 |
| Cow position: | chr13:15288420-15288526 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 226-352 |
| Cow position: | chr13:17496573-17496700 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 78, 85 |
| Conread position: | 226-371 |
| Cow position: | chr13:37982237-37982386 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 226-372 |
| Cow position: | chr13:45107905-45108050 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 226-387 |
| Cow position: | chr13:48251494-48251662 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 226-387 |
| Cow position: | chr13:49514257-49514425 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 226-421 |
| Cow position: | chr13:30280495-30280694 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 106, 171 |
| Conread position: | 226-444 |
| Cow position: | chr13:37461225-37461447 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 103, 171 |
| Conread position: | 226-451 |
| Cow position: | chr13:47186852-47186643 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 226-454 |
| Cow position: | chr13:53574477-53574252 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 57, 88 |
| Conread position: | 226-457 |
| Cow position: | chr13:37520872-37521101 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 121 |
| Conread position: | 226-459 |
| Cow position: | chr13:15622331-15622106 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 226-459 |
| Cow position: | chr13:52834005-52833764 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 93, 175 |
| Conread position: | 226-462 |
| Cow position: | chr13:40722206-40722444 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 102, 90 |
| Conread position: | 226-462 |
| Cow position: | chr13:48165000-48165229 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 226-464 |
| Cow position: | chr13:6539688-6539926 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 57, 165 |
| Conread position: | 226-464 |
| Cow position: | chr13:46284111-46284357 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 96, 174 |
| Conread position: | 226-551 |
| Cow position: | chr13:1368495-1368173 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 111, 170 |
| Conread position: | 226-551 |
| Cow position: | chr13:20605644-20605964 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 226-551 |
| Cow position: | chr13:32961167-32961482 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 99, 129 |
| Conread position: | 226-551 |
| Cow position: | chr13:33351903-33352212 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 226-551 |
| Cow position: | chr13:34282161-34281835 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 168 |
| Conread position: | 226-551 |
| Cow position: | chr13:34941179-34941501 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 226-551 |
| Cow position: | chr13:36352511-36352815 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 238 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 111, 132 |
| Conread position: | 226-551 |
| Cow position: | chr13:61976489-61976808 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 110 |
| Conread position: | 226-552 |
| Cow position: | chr13:6054856-6054531 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 165 |
| Conread position: | 226-552 |
| Cow position: | chr13:8961056-8960741 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 226-595 |
| Cow position: | chr13:32536133-32535757 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 261 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 111, 130 |
| Conread position: | 226-595 |
| Cow position: | chr13:37978709-37979074 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 167 |
| Conread position: | 226-596 |
| Cow position: | chr13:2414502-2414127 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 165 |
| Conread position: | 226-596 |
| Cow position: | chr13:20175216-20174847 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 48 |
| Conread position: | 241-594 |
| Cow position: | chr13:1636470-1636104 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 111 |
| Conread position: | 270-596 |
| Cow position: | chr13:60429648-60429977 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 93 |
| Conread position: | 296-596 |
| Cow position: | chr13:60974473-60974180 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 224 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 249, 95 |
| Conread position: | 408-594 |
| Cow position: | chr13:17994231-17994027 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.