Cow genome map
| Conread name: | Pig1-120P12 |
| Conread position: | 208-551 |
| Cow position: | chr15:41087265-41087603 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 8 |
| Conread position: | 221-593 |
| Cow position: | chr15:13681113-13681493 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 262 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 48, 90 |
| Conread position: | 225-436 |
| Cow position: | chr15:40725039-40724824 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 99, 172 |
| Conread position: | 225-498 |
| Cow position: | chr15:53102269-53102001 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 225-541 |
| Cow position: | chr15:38876095-38876418 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 181, 129 |
| Conread position: | 226-361 |
| Cow position: | chr15:9436941-9437082 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 226-367 |
| Cow position: | chr15:27128194-27128053 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 226-370 |
| Cow position: | chr15:11628783-11628927 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 131, 42 |
| Conread position: | 226-385 |
| Cow position: | chr15:7750579-7750737 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 226-409 |
| Cow position: | chr15:19279384-19279569 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 96, 81 |
| Conread position: | 226-424 |
| Cow position: | chr15:52204109-52204311 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 13, 28 |
| Conread position: | 226-430 |
| Cow position: | chr15:13856118-13856326 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 105, 169 |
| Conread position: | 226-443 |
| Cow position: | chr15:34140596-34140375 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 102, 127 |
| Conread position: | 226-453 |
| Cow position: | chr15:16456547-16456317 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 101, 171 |
| Conread position: | 226-454 |
| Cow position: | chr15:14855868-14856094 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 86 |
| Conread position: | 226-458 |
| Cow position: | chr15:34036417-34036649 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 92, 148 |
| Conread position: | 226-462 |
| Cow position: | chr15:12162881-12163119 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 101, 69 |
| Conread position: | 226-462 |
| Cow position: | chr15:21453738-21453979 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 56, 43 |
| Conread position: | 226-509 |
| Cow position: | chr15:25907808-25907535 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 155 |
| Conread position: | 226-522 |
| Cow position: | chr15:49258651-49258360 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 55 |
| Conread position: | 226-526 |
| Cow position: | chr15:32475994-32475695 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 115, 165 |
| Conread position: | 226-527 |
| Cow position: | chr15:608743-608447 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 150 |
| Conread position: | 226-551 |
| Cow position: | chr15:5234424-5234745 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 226-551 |
| Cow position: | chr15:7191675-7192002 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 51 |
| Conread position: | 226-551 |
| Cow position: | chr15:7749558-7749878 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 76 |
| Conread position: | 226-551 |
| Cow position: | chr15:12259902-12259589 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 111 |
| Conread position: | 226-551 |
| Cow position: | chr15:30046955-30047280 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 49 |
| Conread position: | 226-551 |
| Cow position: | chr15:41360381-41360703 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 234 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 111, 166 |
| Conread position: | 226-552 |
| Cow position: | chr15:4374067-4373733 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 176 |
| Conread position: | 226-552 |
| Cow position: | chr15:16604412-16604080 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 103, 176 |
| Conread position: | 226-552 |
| Cow position: | chr15:16741445-16741779 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 101, 175 |
| Conread position: | 226-552 |
| Cow position: | chr15:35041289-35041612 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 110, 171 |
| Conread position: | 226-588 |
| Cow position: | chr15:38683772-38683436 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 261 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 37, 107 |
| Conread position: | 226-593 |
| Cow position: | chr15:26078786-26079160 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 166 |
| Conread position: | 226-594 |
| Cow position: | chr15:47634671-47634291 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 170 |
| Conread position: | 226-595 |
| Cow position: | chr15:33976110-33976487 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 49 |
| Conread position: | 226-595 |
| Cow position: | chr15:34206619-34206987 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 111 |
| Conread position: | 296-595 |
| Cow position: | chr15:24037898-24038199 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 95 |
| Conread position: | 328-595 |
| Cow position: | chr15:5722202-5722465 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.