Cow genome map
| Conread name: | Pig1-120P12 |
| Conread position: | 219-551 |
| Cow position: | chr16:23872150-23871821 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 89 |
| Conread position: | 220-552 |
| Cow position: | chr16:6297758-6297435 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 104, 164 |
| Conread position: | 225-444 |
| Cow position: | chr16:2307944-2308163 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 112, 173 |
| Conread position: | 225-480 |
| Cow position: | chr16:45534491-45534743 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 225-551 |
| Cow position: | chr16:7917308-7917630 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 91 |
| Conread position: | 225-551 |
| Cow position: | chr16:49126677-49126354 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 225-551 |
| Cow position: | chr16:50712401-50712077 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 225-560 |
| Cow position: | chr16:18354439-18354114 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 168 |
| Conread position: | 226-384 |
| Cow position: | chr16:55109634-55109476 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 117, 105 |
| Conread position: | 226-385 |
| Cow position: | chr16:53409740-53409586 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 226-387 |
| Cow position: | chr16:5592829-5592997 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 85, 90 |
| Conread position: | 226-391 |
| Cow position: | chr16:29094177-29094349 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 226-393 |
| Cow position: | chr16:16032881-16033052 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 226-430 |
| Cow position: | chr16:13792035-13792242 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 106, 60 |
| Conread position: | 226-430 |
| Cow position: | chr16:30052972-30053180 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 113, 172 |
| Conread position: | 226-433 |
| Cow position: | chr16:26067249-26067454 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 100, 54 |
| Conread position: | 226-439 |
| Cow position: | chr16:29309925-29310142 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 96, 171 |
| Conread position: | 226-444 |
| Cow position: | chr16:13601581-13601359 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 101, 171 |
| Conread position: | 226-448 |
| Cow position: | chr16:41688851-41689075 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 98, 169 |
| Conread position: | 226-452 |
| Cow position: | chr16:17173272-17173490 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 226-454 |
| Cow position: | chr16:24875937-24875708 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 56, 168 |
| Conread position: | 226-461 |
| Cow position: | chr16:18071816-18072061 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 49, 224 |
| Conread position: | 226-462 |
| Cow position: | chr16:22868691-22868466 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 226-464 |
| Cow position: | chr16:53612784-53613024 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 119, 159 |
| Conread position: | 226-467 |
| Cow position: | chr16:50113197-50113442 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 111, 171 |
| Conread position: | 226-526 |
| Cow position: | chr16:20259932-20260244 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 223 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 43, 169 |
| Conread position: | 226-539 |
| Cow position: | chr16:44654723-44654416 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 104 |
| Conread position: | 226-548 |
| Cow position: | chr16:48370442-48370121 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 168 |
| Conread position: | 226-551 |
| Cow position: | chr16:16177327-16177648 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 165 |
| Conread position: | 226-551 |
| Cow position: | chr16:31122747-31122420 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 165 |
| Conread position: | 226-551 |
| Cow position: | chr16:42242622-42242289 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 100, 144 |
| Conread position: | 226-551 |
| Cow position: | chr16:45139181-45139498 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 51 |
| Conread position: | 226-552 |
| Cow position: | chr16:19015448-19015119 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 106, 153 |
| Conread position: | 226-552 |
| Cow position: | chr16:51481091-51481418 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 98, 169 |
| Conread position: | 226-556 |
| Cow position: | chr16:24445761-24446095 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 172 |
| Conread position: | 226-560 |
| Cow position: | chr16:16402827-16402489 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 171 |
| Conread position: | 226-592 |
| Cow position: | chr16:4699447-4699096 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 166 |
| Conread position: | 226-595 |
| Cow position: | chr16:13713382-13713025 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 255 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 124, 67 |
| Conread position: | 226-596 |
| Cow position: | chr16:15255442-15255067 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 164 |
| Conread position: | 226-596 |
| Cow position: | chr16:30311598-30311222 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 165 |
| Conread position: | 234-596 |
| Cow position: | chr16:26074689-26075050 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 98, 55 |
| Conread position: | 242-595 |
| Cow position: | chr16:42073437-42073079 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 149 |
| Conread position: | 417-595 |
| Cow position: | chr16:53627724-53627540 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 122, 29 |
| Conread position: | 440-596 |
| Cow position: | chr16:3246474-3246318 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 8, 49 |
Show alignments to all cow chromosomes.