Cow genome map
| Conread name: | Pig1-120P12 |
| Conread position: | 220-552 |
| Cow position: | chr17:30753510-30753178 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 239 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 104, 52 |
| Conread position: | 221-464 |
| Cow position: | chr17:20215674-20215922 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 110, 178 |
| Conread position: | 225-551 |
| Cow position: | chr17:25542259-25541942 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 225-552 |
| Cow position: | chr17:33370670-33370339 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 89 |
| Conread position: | 225-596 |
| Cow position: | chr17:20358427-20358804 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 43 |
| Conread position: | 226-358 |
| Cow position: | chr17:8205530-8205663 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 226-424 |
| Cow position: | chr17:21115656-21115460 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 155 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 226-435 |
| Cow position: | chr17:6623232-6623438 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 226-442 |
| Cow position: | chr17:24334235-24334449 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 226-446 |
| Cow position: | chr17:24618374-24618601 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 120, 174 |
| Conread position: | 226-453 |
| Cow position: | chr17:5361509-5361287 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 111, 146 |
| Conread position: | 226-462 |
| Cow position: | chr17:40741157-40741393 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 179 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 135, 168 |
| Conread position: | 226-463 |
| Cow position: | chr17:25140800-25141035 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 164 |
| Conread position: | 226-464 |
| Cow position: | chr17:28359375-28359617 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 226-464 |
| Cow position: | chr17:30413552-30413794 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 80, 84 |
| Conread position: | 226-468 |
| Cow position: | chr17:32977648-32977410 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 105 |
| Conread position: | 226-474 |
| Cow position: | chr17:44030141-44030387 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 226-477 |
| Cow position: | chr17:9905944-9906197 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 101, 132 |
| Conread position: | 226-480 |
| Cow position: | chr17:8995840-8995587 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 227, 165 |
| Conread position: | 226-493 |
| Cow position: | chr17:13916267-13916006 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 105, 172 |
| Conread position: | 226-539 |
| Cow position: | chr17:29292828-29292508 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 173 |
| Conread position: | 226-551 |
| Cow position: | chr17:5748261-5747926 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 172 |
| Conread position: | 226-551 |
| Cow position: | chr17:13940769-13940451 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 70 |
| Conread position: | 226-551 |
| Cow position: | chr17:21362960-21363278 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 93 |
| Conread position: | 226-551 |
| Cow position: | chr17:23337466-23337142 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 165 |
| Conread position: | 226-551 |
| Cow position: | chr17:24549717-24550041 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 164 |
| Conread position: | 226-551 |
| Cow position: | chr17:35021136-35020818 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 100, 171 |
| Conread position: | 226-552 |
| Cow position: | chr17:9748319-9748642 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 43 |
| Conread position: | 226-552 |
| Cow position: | chr17:13237175-13236853 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 233 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 111, 56 |
| Conread position: | 226-552 |
| Cow position: | chr17:25167849-25168182 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 177 |
| Conread position: | 226-552 |
| Cow position: | chr17:27053316-27053642 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 122, 99 |
| Conread position: | 226-582 |
| Cow position: | chr17:241882-242246 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 175 |
| Conread position: | 226-590 |
| Cow position: | chr17:8926687-8926306 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 173 |
| Conread position: | 226-593 |
| Cow position: | chr17:11216332-11215965 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 117 |
| Conread position: | 226-596 |
| Cow position: | chr17:22774938-22775301 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 167 |
| Conread position: | 236-596 |
| Cow position: | chr17:3386856-3387211 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 38 |
| Conread position: | 241-593 |
| Cow position: | chr17:29156992-29157343 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 29, 52 |
| Conread position: | 301-596 |
| Cow position: | chr17:21707379-21707081 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 186, 90 |
| Conread position: | 324-596 |
| Cow position: | chr17:25815254-25815533 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 67 |
| Conread position: | 406-594 |
| Cow position: | chr17:22032957-22032763 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 120, 82 |
| Conread position: | 447-594 |
| Cow position: | chr17:14848755-14848600 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 107, 12 |
Show alignments to all cow chromosomes.