Cow genome map
| Conread name: | Pig1-120P12 |
| Conread position: | 225-376 |
| Cow position: | chr18:4603041-4602890 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 225-551 |
| Cow position: | chr18:49542963-49543276 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 230 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 36, 132 |
| Conread position: | 226-357 |
| Cow position: | chr18:29028530-29028398 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 226-371 |
| Cow position: | chr18:25972256-25972105 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 226-382 |
| Cow position: | chr18:2592636-2592473 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 226-392 |
| Cow position: | chr18:27457279-27457113 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 226-423 |
| Cow position: | chr18:16390409-16390208 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 35, 39 |
| Conread position: | 226-435 |
| Cow position: | chr18:30231748-30231536 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 92, 140 |
| Conread position: | 226-448 |
| Cow position: | chr18:24978093-24977881 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 203, 68 |
| Conread position: | 226-450 |
| Cow position: | chr18:249410-249179 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 148 |
| Conread position: | 226-452 |
| Cow position: | chr18:14886665-14886439 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 43, 169 |
| Conread position: | 226-461 |
| Cow position: | chr18:48291404-48291173 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 226-462 |
| Cow position: | chr18:1955049-1954815 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 226-462 |
| Cow position: | chr18:33158344-33158584 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 193, 82 |
| Conread position: | 226-462 |
| Cow position: | chr18:38984854-38985084 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 226-462 |
| Cow position: | chr18:48392305-48392544 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 110, 87 |
| Conread position: | 226-497 |
| Cow position: | chr18:21767775-21767505 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 106, 168 |
| Conread position: | 226-499 |
| Cow position: | chr18:24293327-24293604 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 105, 173 |
| Conread position: | 226-530 |
| Cow position: | chr18:19115983-19115673 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 165 |
| Conread position: | 226-538 |
| Cow position: | chr18:50789542-50789847 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 98, 170 |
| Conread position: | 226-540 |
| Cow position: | chr18:56151179-56150869 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 226-542 |
| Cow position: | chr18:48451149-48451458 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 166 |
| Conread position: | 226-544 |
| Cow position: | chr18:56165472-56165774 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 226-548 |
| Cow position: | chr18:43950315-43950638 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 77 |
| Conread position: | 226-550 |
| Cow position: | chr18:6047012-6046687 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 106 |
| Conread position: | 226-550 |
| Cow position: | chr18:21721805-21721483 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 83 |
| Conread position: | 226-551 |
| Cow position: | chr18:3098837-3098516 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 64 |
| Conread position: | 226-551 |
| Cow position: | chr18:13173051-13172724 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 166 |
| Conread position: | 226-551 |
| Cow position: | chr18:16227042-16227359 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 144 |
| Conread position: | 226-551 |
| Cow position: | chr18:44262090-44262420 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 169 |
| Conread position: | 226-552 |
| Cow position: | chr18:30216037-30216360 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 107, 82 |
| Conread position: | 226-552 |
| Cow position: | chr18:32280767-32281094 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 101, 169 |
| Conread position: | 226-552 |
| Cow position: | chr18:32908372-32908698 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 171 |
| Conread position: | 226-552 |
| Cow position: | chr18:54031179-54031504 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 232 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 105, 138 |
| Conread position: | 226-556 |
| Cow position: | chr18:20196033-20195700 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 111, 144 |
| Conread position: | 226-560 |
| Cow position: | chr18:14143160-14143502 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 98, 163 |
| Conread position: | 226-560 |
| Cow position: | chr18:37002110-37002435 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 226-594 |
| Cow position: | chr18:7965750-7966113 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 50 |
| Conread position: | 228-550 |
| Cow position: | chr18:35057824-35058136 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 131 |
| Conread position: | 300-593 |
| Cow position: | chr18:30360574-30360282 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 25 |
| Conread position: | 472-594 |
| Cow position: | chr18:1587071-1586948 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
Show alignments to all cow chromosomes.