Cow genome map
| Conread name: | Pig1-120P12 |
| Conread position: | 210-454 |
| Cow position: | chr2:12199238-12198985 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 12, 187 |
| Conread position: | 218-551 |
| Cow position: | chr2:24668638-24668987 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 242 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 122, 185 |
| Conread position: | 219-387 |
| Cow position: | chr2:971143-971310 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 140 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 147, 126 |
| Conread position: | 219-588 |
| Cow position: | chr2:23078483-23078096 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 122, 355 |
| Conread position: | 220-417 |
| Cow position: | chr2:44888688-44888889 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 106, 78 |
| Conread position: | 220-464 |
| Cow position: | chr2:54882665-54882904 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 113, 172 |
| Conread position: | 223-512 |
| Cow position: | chr2:35908288-35908577 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 104, 172 |
| Conread position: | 225-424 |
| Cow position: | chr2:41058174-41057968 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 59, 172 |
| Conread position: | 225-430 |
| Cow position: | chr2:425271-425476 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 108, 74 |
| Conread position: | 225-444 |
| Cow position: | chr2:13006558-13006771 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 225-468 |
| Cow position: | chr2:46058825-46058582 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 182, 166 |
| Conread position: | 225-529 |
| Cow position: | chr2:16334123-16334423 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 52, 176 |
| Conread position: | 225-551 |
| Cow position: | chr2:37120700-37121014 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 95 |
| Conread position: | 225-551 |
| Cow position: | chr2:71437871-71437553 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 105 |
| Conread position: | 225-552 |
| Cow position: | chr2:63288647-63288319 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 171 |
| Conread position: | 226-364 |
| Cow position: | chr2:56103166-56103031 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 226-397 |
| Cow position: | chr2:66480829-66480648 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 100, 175 |
| Conread position: | 226-449 |
| Cow position: | chr2:36423540-36423761 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 226-452 |
| Cow position: | chr2:70933682-70933456 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 107, 159 |
| Conread position: | 226-455 |
| Cow position: | chr2:9370293-9370061 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 42, 170 |
| Conread position: | 226-456 |
| Cow position: | chr2:14748941-14749174 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 180 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 101, 64 |
| Conread position: | 226-460 |
| Cow position: | chr2:21357356-21357134 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 182, 95 |
| Conread position: | 226-461 |
| Cow position: | chr2:45312411-45312173 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 103, 42 |
| Conread position: | 226-461 |
| Cow position: | chr2:83745910-83745667 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 101, 226 |
| Conread position: | 226-462 |
| Cow position: | chr2:14349277-14349515 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 100, 42 |
| Conread position: | 226-464 |
| Cow position: | chr2:29802627-29802390 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 167 |
| Conread position: | 226-464 |
| Cow position: | chr2:58770392-58770630 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 79, 51 |
| Conread position: | 226-468 |
| Cow position: | chr2:1657798-1658028 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 181, 38 |
| Conread position: | 226-468 |
| Cow position: | chr2:46995380-46995141 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 57, 91 |
| Conread position: | 226-477 |
| Cow position: | chr2:32499371-32499116 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 96, 168 |
| Conread position: | 226-519 |
| Cow position: | chr2:45562962-45563252 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 226-547 |
| Cow position: | chr2:64532854-64533169 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 165 |
| Conread position: | 226-548 |
| Cow position: | chr2:4017348-4017036 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 166 |
| Conread position: | 226-551 |
| Cow position: | chr2:9591449-9591760 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 226-551 |
| Cow position: | chr2:32417361-32417028 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 94 |
| Conread position: | 226-551 |
| Cow position: | chr2:39280706-39281023 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 226-551 |
| Cow position: | chr2:43625018-43624696 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 226-551 |
| Cow position: | chr2:44222137-44222448 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 226-551 |
| Cow position: | chr2:50352373-50352695 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 58, 63 |
| Conread position: | 226-551 |
| Cow position: | chr2:51824448-51824758 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 226-551 |
| Cow position: | chr2:55279071-55278769 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 67 |
| Conread position: | 226-551 |
| Cow position: | chr2:81927346-81927686 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 180 |
| Conread position: | 226-552 |
| Cow position: | chr2:9407830-9408166 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 171 |
| Conread position: | 226-552 |
| Cow position: | chr2:10868405-10868060 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 100, 173 |
| Conread position: | 226-552 |
| Cow position: | chr2:39855291-39855621 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 172 |
| Conread position: | 226-552 |
| Cow position: | chr2:48749210-48748893 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 96, 170 |
| Conread position: | 226-552 |
| Cow position: | chr2:60947250-60947567 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 107, 169 |
| Conread position: | 226-552 |
| Cow position: | chr2:62564184-62563860 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 105, 171 |
| Conread position: | 226-552 |
| Cow position: | chr2:64765648-64765327 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 165, 109 |
| Conread position: | 226-566 |
| Cow position: | chr2:41915916-41915575 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 110 |
| Conread position: | 226-593 |
| Cow position: | chr2:549807-549442 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 38 |
| Conread position: | 226-593 |
| Cow position: | chr2:46357356-46357726 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 165 |
| Conread position: | 226-594 |
| Cow position: | chr2:49608103-49608474 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 49 |
| Conread position: | 226-595 |
| Cow position: | chr2:14853837-14854203 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 46 |
| Conread position: | 226-595 |
| Cow position: | chr2:39385349-39384983 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 47 |
| Conread position: | 226-596 |
| Cow position: | chr2:14806828-14806461 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 260 |
| Conread position: | 226-596 |
| Cow position: | chr2:39262992-39263375 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 30 |
| Conread position: | 274-596 |
| Cow position: | chr2:7965679-7966003 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 13 |
| Conread position: | 282-593 |
| Cow position: | chr2:53533241-53532922 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 27 |
| Conread position: | 282-594 |
| Cow position: | chr2:44081012-44081323 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 110 |
| Conread position: | 406-596 |
| Cow position: | chr2:13543714-13543911 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 147, 89 |
Show alignments to all cow chromosomes.