Cow genome map
| Conread name: | Pig1-120P12 |
| Conread position: | 218-552 |
| Cow position: | chr20:8869737-8869404 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 119, 8 |
| Conread position: | 219-371 |
| Cow position: | chr20:8891088-8891244 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 128, 7 |
| Conread position: | 221-464 |
| Cow position: | chr20:13094484-13094237 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 105, 179 |
| Conread position: | 225-378 |
| Cow position: | chr20:41698416-41698264 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 145, 65 |
| Conread position: | 225-551 |
| Cow position: | chr20:12442147-12441819 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 172 |
| Conread position: | 226-387 |
| Cow position: | chr20:8020529-8020362 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 44, 151 |
| Conread position: | 226-435 |
| Cow position: | chr20:32939072-32939283 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 103, 64 |
| Conread position: | 226-436 |
| Cow position: | chr20:14735205-14735418 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 100, 140 |
| Conread position: | 226-437 |
| Cow position: | chr20:35843642-35843429 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 107, 74 |
| Conread position: | 226-443 |
| Cow position: | chr20:16157836-16157616 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 111, 170 |
| Conread position: | 226-448 |
| Cow position: | chr20:4329178-4328956 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 98, 167 |
| Conread position: | 226-459 |
| Cow position: | chr20:4672477-4672712 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 90, 169 |
| Conread position: | 226-462 |
| Cow position: | chr20:34107509-34107751 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 100, 171 |
| Conread position: | 226-464 |
| Cow position: | chr20:9509379-9509143 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 226-474 |
| Cow position: | chr20:26078850-26078617 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 183, 101 |
| Conread position: | 226-519 |
| Cow position: | chr20:7527814-7527520 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 171 |
| Conread position: | 226-532 |
| Cow position: | chr20:42137936-42138224 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 226-540 |
| Cow position: | chr20:35970495-35970804 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 119 |
| Conread position: | 226-547 |
| Cow position: | chr20:10235402-10235721 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 226-548 |
| Cow position: | chr20:6423524-6423834 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 58 |
| Conread position: | 226-550 |
| Cow position: | chr20:581371-581049 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 101 |
| Conread position: | 226-550 |
| Cow position: | chr20:3059771-3059450 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 105, 171 |
| Conread position: | 226-550 |
| Cow position: | chr20:15821865-15822189 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 172 |
| Conread position: | 226-551 |
| Cow position: | chr20:3599848-3599517 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 21 |
| Conread position: | 226-551 |
| Cow position: | chr20:5939426-5939096 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 166 |
| Conread position: | 226-551 |
| Cow position: | chr20:13269177-13269496 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 98 |
| Conread position: | 226-551 |
| Cow position: | chr20:22446087-22445762 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 163 |
| Conread position: | 226-551 |
| Cow position: | chr20:23679602-23679273 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 42 |
| Conread position: | 226-552 |
| Cow position: | chr20:13048870-13048544 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 60 |
| Conread position: | 226-552 |
| Cow position: | chr20:13955590-13955913 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 236 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 102, 172 |
| Conread position: | 226-552 |
| Cow position: | chr20:19146419-19146744 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 64 |
| Conread position: | 226-574 |
| Cow position: | chr20:28440822-28441160 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 43 |
| Conread position: | 226-588 |
| Cow position: | chr20:26469526-26469157 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 59 |
| Conread position: | 226-593 |
| Cow position: | chr20:25162539-25162200 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 251 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 230, 53 |
| Conread position: | 226-596 |
| Cow position: | chr20:5077746-5078119 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 114 |
| Conread position: | 300-596 |
| Cow position: | chr20:3659076-3658769 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 357-596 |
| Cow position: | chr20:6054822-6054587 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 193, 18 |
| Conread position: | 406-596 |
| Cow position: | chr20:31147824-31148018 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 143, 71 |
| Conread position: | 471-591 |
| Cow position: | chr20:34251885-34251757 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
Show alignments to all cow chromosomes.