Cow genome map
| Conread name: | Pig1-120P12 |
| Conread position: | 221-355 |
| Cow position: | chr21:3381694-3381558 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 221-532 |
| Cow position: | chr21:34141857-34141532 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 101, 226 |
| Conread position: | 225-464 |
| Cow position: | chr21:31252898-31253133 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 225-551 |
| Cow position: | chr21:81643-81964 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 56 |
| Conread position: | 225-592 |
| Cow position: | chr21:34391396-34391027 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 166 |
| Conread position: | 226-334 |
| Cow position: | chr21:22724426-22724318 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 87 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 226-335 |
| Cow position: | chr21:24947534-24947425 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 226-357 |
| Cow position: | chr21:21971358-21971228 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 43, 60 |
| Conread position: | 226-433 |
| Cow position: | chr21:18828766-18828561 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 226-444 |
| Cow position: | chr21:28934940-28935161 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 111, 164 |
| Conread position: | 226-447 |
| Cow position: | chr21:38908110-38908330 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 110, 96 |
| Conread position: | 226-454 |
| Cow position: | chr21:21000484-21000253 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 111, 49 |
| Conread position: | 226-461 |
| Cow position: | chr21:18846252-18846024 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 218, 145 |
| Conread position: | 226-463 |
| Cow position: | chr21:36956529-36956765 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 113, 161 |
| Conread position: | 226-464 |
| Cow position: | chr21:2927661-2927426 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 185, 42 |
| Conread position: | 226-464 |
| Cow position: | chr21:6051048-6051289 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 95, 166 |
| Conread position: | 226-464 |
| Cow position: | chr21:31661627-31661868 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 44, 144 |
| Conread position: | 226-468 |
| Cow position: | chr21:32560067-32559827 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 226-531 |
| Cow position: | chr21:44657889-44658191 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 226-532 |
| Cow position: | chr21:22140771-22140464 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 170 |
| Conread position: | 226-547 |
| Cow position: | chr21:28442307-28442634 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 111 |
| Conread position: | 226-547 |
| Cow position: | chr21:29069747-29069439 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 226-549 |
| Cow position: | chr21:393593-393913 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 226-551 |
| Cow position: | chr21:684059-684374 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 130 |
| Conread position: | 226-551 |
| Cow position: | chr21:4282293-4281974 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 163 |
| Conread position: | 226-551 |
| Cow position: | chr21:20925934-20925613 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 226-551 |
| Cow position: | chr21:28989183-28989506 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 100, 172 |
| Conread position: | 226-552 |
| Cow position: | chr21:14762943-14762612 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 232 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 101, 170 |
| Conread position: | 226-552 |
| Cow position: | chr21:18979284-18978953 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 165 |
| Conread position: | 226-554 |
| Cow position: | chr21:28210757-28211093 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 82 |
| Conread position: | 226-578 |
| Cow position: | chr21:29942567-29942926 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 171 |
| Conread position: | 226-579 |
| Cow position: | chr21:33420145-33419795 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 97 |
| Conread position: | 226-588 |
| Cow position: | chr21:39401165-39401522 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 171 |
| Conread position: | 226-590 |
| Cow position: | chr21:20575889-20575518 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 171 |
| Conread position: | 226-595 |
| Cow position: | chr21:9863053-9862687 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 48 |
| Conread position: | 226-595 |
| Cow position: | chr21:9940605-9940243 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 259, 110 |
| Conread position: | 226-595 |
| Cow position: | chr21:28810678-28810316 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 96, 47 |
| Conread position: | 226-596 |
| Cow position: | chr21:3236100-3236476 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 64 |
| Conread position: | 226-596 |
| Cow position: | chr21:25344447-25344823 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 167 |
| Conread position: | 226-596 |
| Cow position: | chr21:36756179-36756550 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 170 |
| Conread position: | 227-593 |
| Cow position: | chr21:168074-167709 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 165 |
| Conread position: | 242-593 |
| Cow position: | chr21:41957596-41957227 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 270-595 |
| Cow position: | chr21:937667-937985 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 120 |
| Conread position: | 283-595 |
| Cow position: | chr21:32574352-32574669 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 115 |
| Conread position: | 350-596 |
| Cow position: | chr21:18712981-18713235 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 196, 41 |
Show alignments to all cow chromosomes.