Cow genome map
| Conread name: | Pig1-120P12 |
| Conread position: | 193-596 |
| Cow position: | chr3:55010717-55010301 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 214 |
| Conread position: | 220-453 |
| Cow position: | chr3:49253052-49252827 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 53, 94 |
| Conread position: | 223-554 |
| Cow position: | chr3:26920377-26920706 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 50 |
| Conread position: | 225-484 |
| Cow position: | chr3:50347489-50347734 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 135, 61 |
| Conread position: | 225-578 |
| Cow position: | chr3:7566931-7566587 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 226-334 |
| Cow position: | chr3:12712730-12712624 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 226-334 |
| Cow position: | chr3:39867531-39867639 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 226-353 |
| Cow position: | chr3:84598827-84598694 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 226-369 |
| Cow position: | chr3:12676043-12675894 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 226-422 |
| Cow position: | chr3:52651303-52651113 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 226-444 |
| Cow position: | chr3:65581556-65581335 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 98, 171 |
| Conread position: | 226-448 |
| Cow position: | chr3:39172027-39171800 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 100, 172 |
| Conread position: | 226-448 |
| Cow position: | chr3:73764695-73764466 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 226-449 |
| Cow position: | chr3:14602262-14602042 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 98, 60 |
| Conread position: | 226-451 |
| Cow position: | chr3:7467317-7467091 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 115, 57 |
| Conread position: | 226-451 |
| Cow position: | chr3:52418419-52418645 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 103, 167 |
| Conread position: | 226-453 |
| Cow position: | chr3:45647140-45647364 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 104, 98 |
| Conread position: | 226-454 |
| Cow position: | chr3:64278931-64279158 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 116, 43 |
| Conread position: | 226-458 |
| Cow position: | chr3:79978543-79978307 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 43, 172 |
| Conread position: | 226-462 |
| Cow position: | chr3:25076653-25076904 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 113, 87 |
| Conread position: | 226-462 |
| Cow position: | chr3:31504541-31504309 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 107, 165 |
| Conread position: | 226-462 |
| Cow position: | chr3:34392632-34392404 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 226-464 |
| Cow position: | chr3:56905-56679 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 37, 30 |
| Conread position: | 226-464 |
| Cow position: | chr3:20093251-20093017 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 226-464 |
| Cow position: | chr3:73936549-73936305 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 113, 173 |
| Conread position: | 226-468 |
| Cow position: | chr3:4088192-4087957 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 226-498 |
| Cow position: | chr3:55836430-55836159 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 59 |
| Conread position: | 226-499 |
| Cow position: | chr3:29595856-29596122 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 226-508 |
| Cow position: | chr3:15191837-15192112 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 226-544 |
| Cow position: | chr3:29887934-29887624 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 226-548 |
| Cow position: | chr3:8900896-8901224 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 169 |
| Conread position: | 226-551 |
| Cow position: | chr3:9843058-9843390 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 167 |
| Conread position: | 226-551 |
| Cow position: | chr3:16890199-16890541 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 64 |
| Conread position: | 226-551 |
| Cow position: | chr3:18393904-18393577 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 163 |
| Conread position: | 226-551 |
| Cow position: | chr3:26474636-26474968 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 16 |
| Conread position: | 226-551 |
| Cow position: | chr3:60389134-60389443 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 226-551 |
| Cow position: | chr3:63176992-63177318 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 169 |
| Conread position: | 226-551 |
| Cow position: | chr3:63688278-63687956 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 226-551 |
| Cow position: | chr3:77271793-77271460 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 102 |
| Conread position: | 226-551 |
| Cow position: | chr3:82617868-82618194 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 145 |
| Conread position: | 226-552 |
| Cow position: | chr3:15557437-15557776 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 147 |
| Conread position: | 226-552 |
| Cow position: | chr3:58865999-58865651 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 246 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 103, 177 |
| Conread position: | 226-558 |
| Cow position: | chr3:34270419-34270740 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 76 |
| Conread position: | 226-595 |
| Cow position: | chr3:34556737-34556374 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 165 |
| Conread position: | 226-595 |
| Cow position: | chr3:49218824-49218450 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 166 |
| Conread position: | 226-596 |
| Cow position: | chr3:80054054-80053679 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 59 |
| Conread position: | 228-551 |
| Cow position: | chr3:14552366-14552685 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 241-596 |
| Cow position: | chr3:44535261-44534902 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 152 |
| Conread position: | 256-593 |
| Cow position: | chr3:8591826-8591496 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 134 |
| Conread position: | 456-596 |
| Cow position: | chr3:56704825-56704679 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
Show alignments to all cow chromosomes.