Cow genome map
Conread name: | Pig1-120P12 |
Conread position: | 218-474 |
Cow position: | chr5:51858760-51858500 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 194 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 58, 46 |
Conread position: | 225-448 |
Cow position: | chr5:6901216-6900989 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 164 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 114, 172 |
Conread position: | 225-449 |
Cow position: | chr5:57074784-57074563 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 167 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 166, 0 |
Conread position: | 225-493 |
Cow position: | chr5:5081014-5081279 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 166 |
Conread position: | 226-358 |
Cow position: | chr5:11230319-11230191 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 104 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 106, 51 |
Conread position: | 226-385 |
Cow position: | chr5:54351618-54351459 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 127 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 226-424 |
Cow position: | chr5:12352533-12352335 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 158 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 74, 167 |
Conread position: | 226-424 |
Cow position: | chr5:45192356-45192153 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 145 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 44, 85 |
Conread position: | 226-437 |
Cow position: | chr5:69771709-69771925 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 167 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 64, 173 |
Conread position: | 226-451 |
Cow position: | chr5:43991817-43992052 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 174 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 42, 173 |
Conread position: | 226-454 |
Cow position: | chr5:37047463-37047695 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 173 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 33, 39 |
Conread position: | 226-458 |
Cow position: | chr5:7042183-7041955 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 226-461 |
Cow position: | chr5:35967734-35967973 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 183 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 101, 169 |
Conread position: | 226-462 |
Cow position: | chr5:2310048-2309815 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 179 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 125, 166 |
Conread position: | 226-462 |
Cow position: | chr5:20779923-20779679 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 179 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 100, 169 |
Conread position: | 226-464 |
Cow position: | chr5:15455372-15455611 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 174 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 57, 139 |
Conread position: | 226-464 |
Cow position: | chr5:50064092-50064329 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 173 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 113, 170 |
Conread position: | 226-464 |
Cow position: | chr5:57941356-57941114 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 170 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 98, 170 |
Conread position: | 226-468 |
Cow position: | chr5:41363221-41362982 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 180 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 135, 50 |
Conread position: | 226-532 |
Cow position: | chr5:14630375-14630074 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 0 |
Conread position: | 226-532 |
Cow position: | chr5:27154557-27154859 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 51 |
Conread position: | 226-549 |
Cow position: | chr5:62827221-62826900 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 236, 132 |
Conread position: | 226-550 |
Cow position: | chr5:48225033-48224720 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 231 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 113, 43 |
Conread position: | 226-551 |
Cow position: | chr5:9090472-9090168 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 226-551 |
Cow position: | chr5:12323262-12322945 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 78 |
Conread position: | 226-551 |
Cow position: | chr5:16894236-16893920 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 163 |
Conread position: | 226-551 |
Cow position: | chr5:26467155-26467475 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 165 |
Conread position: | 226-551 |
Cow position: | chr5:28330790-28330476 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 226-551 |
Cow position: | chr5:34638426-34638741 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 0 |
Conread position: | 226-551 |
Cow position: | chr5:46080726-46080401 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 42 |
Conread position: | 226-551 |
Cow position: | chr5:46104414-46104080 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 170 |
Conread position: | 226-551 |
Cow position: | chr5:68480732-68481079 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 243 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 92, 176 |
Conread position: | 226-552 |
Cow position: | chr5:15088718-15089043 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 169 |
Conread position: | 226-552 |
Cow position: | chr5:57365540-57365218 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 171 |
Conread position: | 226-554 |
Cow position: | chr5:22649090-22649424 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 229 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 95, 172 |
Conread position: | 226-555 |
Cow position: | chr5:46295139-46294807 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 171 |
Conread position: | 226-572 |
Cow position: | chr5:65053227-65053570 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 249 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 85, 81 |
Conread position: | 226-591 |
Cow position: | chr5:27015226-27015593 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 294, 163 |
Conread position: | 226-592 |
Cow position: | chr5:16206609-16206245 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 307, 165 |
Conread position: | 226-593 |
Cow position: | chr5:35762824-35763186 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 317, 51 |
Conread position: | 226-593 |
Cow position: | chr5:74644127-74643760 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 160 |
Conread position: | 226-594 |
Cow position: | chr5:24348657-24349019 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 324, 33 |
Conread position: | 226-595 |
Cow position: | chr5:34115175-34115563 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 169 |
Conread position: | 226-596 |
Cow position: | chr5:31634982-31635349 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 39 |
Conread position: | 230-552 |
Cow position: | chr5:62272520-62272200 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 228 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 94, 167 |
Conread position: | 374-591 |
Cow position: | chr5:15462406-15462618 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 166 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 179, 17 |
Show alignments to all cow chromosomes.