Cow genome map
| Conread name: | Pig1-120P12 |
| Conread position: | 221-462 |
| Cow position: | chr6:42726977-42726734 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 106, 130 |
| Conread position: | 221-462 |
| Cow position: | chr6:49733477-49733716 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 111, 101 |
| Conread position: | 223-464 |
| Cow position: | chr6:12518772-12519016 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 110, 174 |
| Conread position: | 223-551 |
| Cow position: | chr6:1914174-1914488 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 72, 78 |
| Conread position: | 225-454 |
| Cow position: | chr6:47381366-47381597 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 94, 171 |
| Conread position: | 225-521 |
| Cow position: | chr6:54925122-54924816 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 97, 44 |
| Conread position: | 225-536 |
| Cow position: | chr6:58370113-58370432 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 174 |
| Conread position: | 225-551 |
| Cow position: | chr6:60516276-60516600 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 102 |
| Conread position: | 225-572 |
| Cow position: | chr6:8636822-8637165 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 226-362 |
| Cow position: | chr6:50446359-50446223 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 226-383 |
| Cow position: | chr6:18969140-18968978 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 47, 152 |
| Conread position: | 226-406 |
| Cow position: | chr6:51385949-51386134 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 96, 181 |
| Conread position: | 226-442 |
| Cow position: | chr6:41466592-41466387 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 226-445 |
| Cow position: | chr6:828137-827917 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 105, 152 |
| Conread position: | 226-454 |
| Cow position: | chr6:50983730-50983956 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 226-455 |
| Cow position: | chr6:12406908-12407136 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 51, 169 |
| Conread position: | 226-468 |
| Cow position: | chr6:25773927-25773691 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 226-479 |
| Cow position: | chr6:68048798-68049046 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 226-508 |
| Cow position: | chr6:28156576-28156290 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 171 |
| Conread position: | 226-537 |
| Cow position: | chr6:52627157-52627467 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 106, 125 |
| Conread position: | 226-549 |
| Cow position: | chr6:606810-607130 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 103 |
| Conread position: | 226-551 |
| Cow position: | chr6:643046-642707 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 226-551 |
| Cow position: | chr6:10695407-10695737 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 149 |
| Conread position: | 226-551 |
| Cow position: | chr6:61575140-61575473 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 42 |
| Conread position: | 226-552 |
| Cow position: | chr6:11160485-11160138 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 68, 180 |
| Conread position: | 226-552 |
| Cow position: | chr6:29077275-29077600 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 51 |
| Conread position: | 226-552 |
| Cow position: | chr6:48946823-48946498 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 107, 170 |
| Conread position: | 226-552 |
| Cow position: | chr6:54433468-54433139 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 103, 66 |
| Conread position: | 226-554 |
| Cow position: | chr6:18987769-18988089 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 226-556 |
| Cow position: | chr6:52001922-52002244 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 226-558 |
| Cow position: | chr6:23987192-23986856 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 161 |
| Conread position: | 226-560 |
| Cow position: | chr6:36471020-36470685 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 22 |
| Conread position: | 226-594 |
| Cow position: | chr6:32427796-32428156 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 81, 134 |
| Conread position: | 229-596 |
| Cow position: | chr6:53933297-53932919 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 263 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 187, 48 |
| Conread position: | 282-596 |
| Cow position: | chr6:11192847-11192538 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 420-596 |
| Cow position: | chr6:57411385-57411558 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 130, 68 |
Show alignments to all cow chromosomes.