Cow genome map
| Conread name: | Pig1-120P12 |
| Conread position: | 197-534 |
| Cow position: | chr7:10369639-10369293 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 252 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 33, 24 |
| Conread position: | 218-588 |
| Cow position: | chr7:61551440-61551814 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 179 |
| Conread position: | 219-547 |
| Cow position: | chr7:15258654-15258960 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 220-451 |
| Cow position: | chr7:8123368-8123132 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 121, 176 |
| Conread position: | 221-461 |
| Cow position: | chr7:10346208-10345964 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 105, 175 |
| Conread position: | 221-551 |
| Cow position: | chr7:40120994-40121339 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 194, 164 |
| Conread position: | 221-552 |
| Cow position: | chr7:47771435-47771102 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 157 |
| Conread position: | 225-464 |
| Cow position: | chr7:25103762-25104006 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 54, 169 |
| Conread position: | 225-544 |
| Cow position: | chr7:29121329-29121649 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 139 |
| Conread position: | 225-558 |
| Cow position: | chr7:7107265-7106905 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 43, 176 |
| Conread position: | 226-368 |
| Cow position: | chr7:43214570-43214718 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 226-378 |
| Cow position: | chr7:9197721-9197881 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 226-422 |
| Cow position: | chr7:44443223-44443030 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 156, 119 |
| Conread position: | 226-443 |
| Cow position: | chr7:24666073-24666295 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 107, 172 |
| Conread position: | 226-445 |
| Cow position: | chr7:39020545-39020328 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 226-454 |
| Cow position: | chr7:13822072-13822303 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 105, 164 |
| Conread position: | 226-454 |
| Cow position: | chr7:20830045-20830277 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 73, 171 |
| Conread position: | 226-457 |
| Cow position: | chr7:23229072-23229303 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 122, 168 |
| Conread position: | 226-461 |
| Cow position: | chr7:32265422-32265648 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 108, 144 |
| Conread position: | 226-462 |
| Cow position: | chr7:39929823-39930064 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 101, 172 |
| Conread position: | 226-462 |
| Cow position: | chr7:45748339-45748099 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 100, 171 |
| Conread position: | 226-464 |
| Cow position: | chr7:9928871-9928637 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 166 |
| Conread position: | 226-464 |
| Cow position: | chr7:50052241-50051998 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 57, 49 |
| Conread position: | 226-474 |
| Cow position: | chr7:22462624-22462389 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 226-522 |
| Cow position: | chr7:41120672-41120372 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 122, 163 |
| Conread position: | 226-533 |
| Cow position: | chr7:48859959-48859665 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 106, 171 |
| Conread position: | 226-540 |
| Cow position: | chr7:31171398-31171091 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 226-551 |
| Cow position: | chr7:17816310-17816626 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 226-551 |
| Cow position: | chr7:43109978-43109660 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 164 |
| Conread position: | 226-551 |
| Cow position: | chr7:50076175-50075854 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 169 |
| Conread position: | 226-551 |
| Cow position: | chr7:52719090-52718762 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 107 |
| Conread position: | 226-551 |
| Cow position: | chr7:53698366-53698043 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 59 |
| Conread position: | 226-551 |
| Cow position: | chr7:62544374-62544035 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 81, 143 |
| Conread position: | 226-551 |
| Cow position: | chr7:63298827-63299138 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 226-551 |
| Cow position: | chr7:65121907-65122215 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 238, 165 |
| Conread position: | 226-552 |
| Cow position: | chr7:5208964-5209295 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 105, 164 |
| Conread position: | 226-552 |
| Cow position: | chr7:10036880-10037205 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 240, 113 |
| Conread position: | 226-552 |
| Cow position: | chr7:19949097-19948775 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 43, 27 |
| Conread position: | 226-552 |
| Cow position: | chr7:20225288-20224953 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 102, 173 |
| Conread position: | 226-552 |
| Cow position: | chr7:40953313-40952989 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 82 |
| Conread position: | 226-552 |
| Cow position: | chr7:52752349-52752019 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 156 |
| Conread position: | 226-552 |
| Cow position: | chr7:65977746-65978067 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 100, 173 |
| Conread position: | 226-552 |
| Cow position: | chr7:68870231-68870559 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 111, 34 |
| Conread position: | 226-554 |
| Cow position: | chr7:42495002-42494681 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 113, 170 |
| Conread position: | 226-560 |
| Cow position: | chr7:35753258-35752925 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 171 |
| Conread position: | 226-560 |
| Cow position: | chr7:36737696-36738012 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 226-570 |
| Cow position: | chr7:61824292-61823966 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 226-594 |
| Cow position: | chr7:268539-268919 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 159 |
| Conread position: | 226-595 |
| Cow position: | chr7:20289708-20289339 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 271 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 107, 167 |
| Conread position: | 226-595 |
| Cow position: | chr7:21326607-21326964 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 64 |
| Conread position: | 226-595 |
| Cow position: | chr7:29378574-29378210 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 108, 171 |
| Conread position: | 226-595 |
| Cow position: | chr7:57517423-57517816 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 226-596 |
| Cow position: | chr7:11870283-11869909 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 169 |
| Conread position: | 226-596 |
| Cow position: | chr7:53034769-53034393 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 171 |
| Conread position: | 227-423 |
| Cow position: | chr7:33810213-33810413 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 104, 164 |
| Conread position: | 228-468 |
| Cow position: | chr7:47876234-47875991 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 40 |
| Conread position: | 228-595 |
| Cow position: | chr7:205312-205677 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 158 |
| Conread position: | 417-596 |
| Cow position: | chr7:14536530-14536353 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 128, 29 |
Show alignments to all cow chromosomes.