Cow genome map
| Conread name: | Pig1-120P12 |
| Conread position: | 219-512 |
| Cow position: | chr9:2482350-2482061 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 112, 157 |
| Conread position: | 225-368 |
| Cow position: | chr9:12847689-12847547 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 225-420 |
| Cow position: | chr9:47448145-47447947 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 102, 172 |
| Conread position: | 225-448 |
| Cow position: | chr9:3075761-3075988 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 116, 88 |
| Conread position: | 225-449 |
| Cow position: | chr9:5400286-5400064 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 70, 78 |
| Conread position: | 225-551 |
| Cow position: | chr9:49982582-49982898 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 73 |
| Conread position: | 225-551 |
| Cow position: | chr9:50689518-50689855 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 114, 171 |
| Conread position: | 226-375 |
| Cow position: | chr9:33026195-33026349 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 226-380 |
| Cow position: | chr9:21840657-21840503 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 226-389 |
| Cow position: | chr9:3730615-3730775 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 226-401 |
| Cow position: | chr9:46524587-46524412 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 100, 51 |
| Conread position: | 226-409 |
| Cow position: | chr9:56253451-56253271 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 103, 137 |
| Conread position: | 226-430 |
| Cow position: | chr9:31092326-31092118 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 35, 39 |
| Conread position: | 226-436 |
| Cow position: | chr9:52037976-52038189 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 170 |
| Conread position: | 226-442 |
| Cow position: | chr9:2910616-2910398 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 101, 51 |
| Conread position: | 226-451 |
| Cow position: | chr9:53531318-53531546 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 116, 171 |
| Conread position: | 226-456 |
| Cow position: | chr9:55365435-55365207 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 73, 59 |
| Conread position: | 226-459 |
| Cow position: | chr9:2119512-2119737 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 213, 42 |
| Conread position: | 226-461 |
| Cow position: | chr9:5518088-5518325 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 106, 140 |
| Conread position: | 226-461 |
| Cow position: | chr9:33067739-33067506 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 165 |
| Conread position: | 226-465 |
| Cow position: | chr9:34945400-34945158 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 173 |
| Conread position: | 226-509 |
| Cow position: | chr9:44500322-44500598 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 226-522 |
| Cow position: | chr9:20238476-20238190 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 226-529 |
| Cow position: | chr9:44579600-44579295 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 171 |
| Conread position: | 226-532 |
| Cow position: | chr9:41932596-41932288 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 171 |
| Conread position: | 226-550 |
| Cow position: | chr9:32396473-32396147 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 34, 42 |
| Conread position: | 226-551 |
| Cow position: | chr9:4929142-4928830 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 142 |
| Conread position: | 226-551 |
| Cow position: | chr9:5510246-5509923 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 226-551 |
| Cow position: | chr9:9723362-9723681 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 226-551 |
| Cow position: | chr9:34310564-34310233 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 81 |
| Conread position: | 226-551 |
| Cow position: | chr9:62668926-62668601 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 142 |
| Conread position: | 226-552 |
| Cow position: | chr9:11286275-11285950 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 67, 169 |
| Conread position: | 226-552 |
| Cow position: | chr9:42628156-42628475 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 101, 171 |
| Conread position: | 226-556 |
| Cow position: | chr9:8612828-8612481 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 96, 137 |
| Conread position: | 226-560 |
| Cow position: | chr9:36446147-36445814 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 167 |
| Conread position: | 226-581 |
| Cow position: | chr9:22617140-22616793 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 226-593 |
| Cow position: | chr9:5501361-5501001 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 90 |
| Conread position: | 226-595 |
| Cow position: | chr9:55074615-55074988 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 63 |
| Conread position: | 226-596 |
| Cow position: | chr9:16300048-16300425 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 40 |
| Conread position: | 226-596 |
| Cow position: | chr9:17410667-17411039 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 165 |
| Conread position: | 328-596 |
| Cow position: | chr9:26057033-26057299 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 193, 13 |
Show alignments to all cow chromosomes.