Cow genome map


           Conread name:
           Pig1-125H18
        

               Conread position:
               1-319
               

               Cow position:
               chr21:4138226-4137895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               1-382
               

               Cow position:
               chr21:49648135-49647738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               60, 340
               

               Conread position:
               6-364
               

               Cow position:
               chr21:15942924-15943276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               8, 43
               

               Conread position:
               7-372
               

               Cow position:
               chr21:4078885-4079258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 178
               

               Conread position:
               14-330
               

               Cow position:
               chr21:2768992-2768666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               43, 174
               

               Conread position:
               36-382
               

               Cow position:
               chr21:39470896-39470540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               250
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               21, 149
               

               Conread position:
               54-382
               

               Cow position:
               chr21:12099442-12099758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               160, 45
               

               Conread position:
               63-382
               

               Cow position:
               chr21:30312613-30312929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               146, 21
               

               Conread position:
               71-290
               

               Cow position:
               chr21:26249-26024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               144, 110
               

               Conread position:
               89-382
               

               Cow position:
               chr21:4568860-4569162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               33, 93
               

               Conread position:
               108-372
               

               Cow position:
               chr21:4733582-4733318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               99, 73
               

               Conread position:
               117-382
               

               Cow position:
               chr21:6622782-6623050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               90, 47
               
Show alignments to all cow chromosomes.