Cow genome map

Conread name: Pig1-127K02

Conread position: 1-205
Cow position: chr28:4045820-4046037 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 1-211
Cow position: chr28:33163490-33163277 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 146
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 10, 67

Conread position: 1-212
Cow position: chr28:12951395-12951616 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 33, 13

Conread position: 1-220
Cow position: chr28:23676109-23676321 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 28, 134

Conread position: 1-221
Cow position: chr28:4013055-4013292 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 1-229
Cow position: chr28:1202269-1202049 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 89

Conread position: 1-248
Cow position: chr28:10615975-10615712 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 128

Conread position: 2-216
Cow position: chr28:24343343-24343555 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 27, 50

Conread position: 3-221
Cow position: chr28:10297829-10298049 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 188

Conread position: 3-222
Cow position: chr28:30746757-30746528 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 29, 179

Conread position: 6-204
Cow position: chr28:3914692-3914897 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 23, 155

Conread position: 6-212
Cow position: chr28:4016507-4016723 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 23, 194

Conread position: 6-221
Cow position: chr28:31166006-31165792 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 26, 97

Conread position: 6-232
Cow position: chr28:18139480-18139248 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 87

Conread position: 6-238
Cow position: chr28:7698002-7697753 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 6-246
Cow position: chr28:11866689-11866435 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 23, 244

Conread position: 7-148
Cow position: chr28:18770062-18770205 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 7

Conread position: 7-148
Cow position: chr28:27161349-27161202 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 90

Conread position: 7-204
Cow position: chr28:13865823-13866015 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 94

Conread position: 7-212
Cow position: chr28:4185884-4186103 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 7-214
Cow position: chr28:7267965-7267747 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 7

Conread position: 7-217
Cow position: chr28:12991127-12991340 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 39

Conread position: 7-217
Cow position: chr28:22571685-22571479 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 55, 23

Conread position: 7-220
Cow position: chr28:26719320-26719538 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 174
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 142

Conread position: 7-221
Cow position: chr28:7964691-7964469 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 42, 26

Conread position: 7-222
Cow position: chr28:14494802-14495013 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 109

Conread position: 7-224
Cow position: chr28:7009002-7008770 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 180
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 8, 222

Conread position: 7-224
Cow position: chr28:22132888-22133120 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 75

Conread position: 7-226
Cow position: chr28:16085302-16085531 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 122

Conread position: 7-227
Cow position: chr28:4881262-4881034 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 26, 7

Conread position: 7-229
Cow position: chr28:23724485-23724254 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 22, 217

Conread position: 7-229
Cow position: chr28:26614850-26615069 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 22, 129

Conread position: 7-229
Cow position: chr28:30608209-30607981 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 184

Conread position: 7-231
Cow position: chr28:3078704-3078481 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 86

Conread position: 7-235
Cow position: chr28:25249331-25249553 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 20, 152

Conread position: 7-238
Cow position: chr28:21046598-21046364 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 7

Conread position: 7-241
Cow position: chr28:11059478-11059720 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 20, 109

Conread position: 8-147
Cow position: chr28:32179674-32179817 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 8-148
Cow position: chr28:19295151-19295009 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 55

Conread position: 8-203
Cow position: chr28:7805443-7805254 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 145

Conread position: 8-215
Cow position: chr28:7156815-7157019 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 140

Conread position: 8-228
Cow position: chr28:19564250-19564019 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 177
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 21, 0

Conread position: 8-229
Cow position: chr28:5193309-5193540 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 187

Conread position: 8-241
Cow position: chr28:11743841-11743598 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 48

Conread position: 9-224
Cow position: chr28:662085-662311 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 216

Conread position: 9-229
Cow position: chr28:21008686-21008454 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 21, 75

Conread position: 9-232
Cow position: chr28:3726232-3725988 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 10-200
Cow position: chr28:555484-555684 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 156
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 19, 172

Conread position: 10-221
Cow position: chr28:23007750-23007533 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 141

Conread position: 10-228
Cow position: chr28:616366-616587 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 104

Conread position: 10-240
Cow position: chr28:4643790-4643541 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 11-148
Cow position: chr28:2898970-2899114 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 11-214
Cow position: chr28:6059489-6059269 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 176

Conread position: 11-228
Cow position: chr28:19216803-19217028 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 18, 0

Conread position: 14-217
Cow position: chr28:32365828-32366023 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 15, 123

Conread position: 14-220
Cow position: chr28:26372726-26372929 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 15, 37

Conread position: 14-221
Cow position: chr28:8291413-8291622 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 104

Conread position: 16-226
Cow position: chr28:3143889-3143672 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 13, 203

Conread position: 17-238
Cow position: chr28:4823591-4823826 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 211

Conread position: 21-212
Cow position: chr28:10762885-10763088 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 21-232
Cow position: chr28:13061624-13061832 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 7, 23

Conread position: 23-198
Cow position: chr28:17601882-17601707 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 6, 126

Conread position: 24-229
Cow position: chr28:5673870-5674091 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 9, 104

Conread position: 32-222
Cow position: chr28:17728095-17727902 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 156
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 10, 54

Conread position: 32-229
Cow position: chr28:15362583-15362794 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 5, 189

Conread position: 36-146
Cow position: chr28:31876811-31876699 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 38-204
Cow position: chr28:16346517-16346346 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 27

Conread position: 38-205
Cow position: chr28:20963515-20963354 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 11, 109

Conread position: 38-212
Cow position: chr28:17949099-17948917 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 38-212
Cow position: chr28:21868471-21868657 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 22, 11

Conread position: 38-217
Cow position: chr28:24996599-24996413 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 38-220
Cow position: chr28:13474314-13474507 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 21, 11

Conread position: 38-221
Cow position: chr28:23410311-23410126 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 171

Conread position: 38-227
Cow position: chr28:7540143-7539963 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 59

Conread position: 38-228
Cow position: chr28:5428739-5428542 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 18

Conread position: 38-234
Cow position: chr28:7350668-7350871 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 10

Conread position: 39-227
Cow position: chr28:13269743-13269934 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 99, 0

Conread position: 39-229
Cow position: chr28:34749752-34749934 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 39-231
Cow position: chr28:22362270-22362461 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 104, 10

Conread position: 39-237
Cow position: chr28:11305616-11305411 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 104, 13

Conread position: 40-212
Cow position: chr28:20281774-20281948 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 62

Conread position: 40-217
Cow position: chr28:10196852-10196665 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 69

Conread position: 40-221
Cow position: chr28:5441881-5441688 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 38

Conread position: 40-231
Cow position: chr28:10247505-10247693 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 9, 83

Conread position: 41-221
Cow position: chr28:10053307-10053123 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 85, 81

Conread position: 42-217
Cow position: chr28:11411518-11411334 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 6

Conread position: 42-217
Cow position: chr28:11815060-11814874 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 7, 83

Conread position: 42-228
Cow position: chr28:9109234-9109425 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 7, 81

Conread position: 42-229
Cow position: chr28:26784223-26784040 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 7, 73

Conread position: 43-157
Cow position: chr28:8167334-8167220 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 43-204
Cow position: chr28:11451473-11451313 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 6, 74

Conread position: 43-212
Cow position: chr28:29850799-29850622 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 153

Conread position: 43-230
Cow position: chr28:7132071-7131874 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 181

Conread position: 43-233
Cow position: chr28:19039003-19038795 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 45-212
Cow position: chr28:5805689-5805862 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 94, 126

Conread position: 45-221
Cow position: chr28:3492762-3492579 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 97, 176

Conread position: 45-224
Cow position: chr28:8681408-8681225 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 97, 0

Conread position: 45-224
Cow position: chr28:20046571-20046754 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 45-225
Cow position: chr28:2279571-2279391 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 99, 27

Conread position: 45-225
Cow position: chr28:16214855-16214672 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 23, 79

Conread position: 45-226
Cow position: chr28:22813280-22813462 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 98, 0

Conread position: 45-237
Cow position: chr28:9294475-9294286 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 23, 105

Conread position: 45-255
Cow position: chr28:5235899-5236117 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 45-274
Cow position: chr28:10964441-10964675 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 162, 88

Conread position: 46-228
Cow position: chr28:6578090-6578267 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 101

Conread position: 47-217
Cow position: chr28:32372269-32372441 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 43

Conread position: 47-229
Cow position: chr28:18791062-18791251 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 90, 0

Conread position: 48-217
Cow position: chr28:11346462-11346284 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 48-217
Cow position: chr28:21207343-21207172 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 48-221
Cow position: chr28:31996588-31996760 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 107

Conread position: 48-225
Cow position: chr28:24082293-24082483 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 48-228
Cow position: chr28:19394896-19395079 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 47

Conread position: 48-229
Cow position: chr28:10888662-10888842 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 152, 86

Conread position: 48-235
Cow position: chr28:10958827-10959020 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 62

Conread position: 48-235
Cow position: chr28:24651581-24651379 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 95, 174

Conread position: 49-233
Cow position: chr28:8304272-8304463 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 53-217
Cow position: chr28:6091393-6091561 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 54-236
Cow position: chr28:8516153-8515966 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 56-213
Cow position: chr28:5188396-5188228 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 56-237
Cow position: chr28:18797353-18797534 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 87, 45

Conread position: 57-229
Cow position: chr28:11585168-11584993 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 86, 160

Conread position: 57-242
Cow position: chr28:8283670-8283470 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 53, 111

Conread position: 57-329
Cow position: chr28:26868117-26867831 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 58-204
Cow position: chr28:16879608-16879760 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 58-211
Cow position: chr28:11016442-11016603 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 49

Conread position: 58-212
Cow position: chr28:3023878-3023716 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 58-212
Cow position: chr28:3746237-3746397 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 58-212
Cow position: chr28:6975276-6975434 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 58-212
Cow position: chr28:10890700-10890542 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 58-214
Cow position: chr28:34081829-34081669 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 58-217
Cow position: chr28:9426315-9426147 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 58-217
Cow position: chr28:24700808-24700959 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 58-217
Cow position: chr28:30902161-30902326 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 58-220
Cow position: chr28:5074473-5074313 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 58-220
Cow position: chr28:29416681-29416517 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 83, 9

Conread position: 58-221
Cow position: chr28:7619115-7618952 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 75, 114

Conread position: 58-221
Cow position: chr28:8936185-8936357 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 58-224
Cow position: chr28:16370048-16369879 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 160

Conread position: 58-225
Cow position: chr28:16919133-16918960 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 85, 18

Conread position: 58-226
Cow position: chr28:3740911-3741078 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 144

Conread position: 58-229
Cow position: chr28:3678397-3678576 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 80, 0

Conread position: 58-229
Cow position: chr28:11816631-11816467 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 58-233
Cow position: chr28:5205306-5205472 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 58-233
Cow position: chr28:21844992-21845172 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 137

Conread position: 58-237
Cow position: chr28:4101557-4101738 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 108, 156

Conread position: 58-238
Cow position: chr28:4071004-4071184 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 85, 37

Conread position: 58-239
Cow position: chr28:777710-777903 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 58-256
Cow position: chr28:5254909-5255114 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 85, 181

Conread position: 60-212
Cow position: chr28:1930859-1930709 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 85, 111

Conread position: 60-221
Cow position: chr28:22500461-22500297 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 29

Conread position: 60-226
Cow position: chr28:10588984-10588819 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 60-227
Cow position: chr28:26960872-26960699 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 83, 71

Conread position: 60-256
Cow position: chr28:16252368-16252166 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 84, 41

Conread position: 61-217
Cow position: chr28:4027425-4027264 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 64-226
Cow position: chr28:26574451-26574614 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 76, 102

Conread position: 64-229
Cow position: chr28:16767555-16767390 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 155, 72

Conread position: 67-211
Cow position: chr28:4866529-4866379 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 67-228
Cow position: chr28:8616876-8617032 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 74-212
Cow position: chr28:24238426-24238284 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 74-229
Cow position: chr28:2737467-2737311 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 73, 141

Conread position: 75-212
Cow position: chr28:21263209-21263354 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 51, 47

Conread position: 75-220
Cow position: chr28:12691209-12691352 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 62, 108

Conread position: 84-233
Cow position: chr28:3727048-3727195 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 55, 33

Conread position: 85-212
Cow position: chr28:7808701-7808830 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 86-229
Cow position: chr28:22170217-22170065 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 24, 0

Show alignments to all cow chromosomes.