Cow genome map

Conread name: Pig1-127K02

Conread position: 1-147
Cow position: chr6:47339350-47339197 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 1-148
Cow position: chr6:7568129-7568285 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 1-204
Cow position: chr6:10189787-10189989 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 164
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 41, 29

Conread position: 1-211
Cow position: chr6:12623521-12623743 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 93

Conread position: 1-211
Cow position: chr6:46465827-46466052 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 54

Conread position: 1-212
Cow position: chr6:21470424-21470197 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 1-216
Cow position: chr6:4383486-4383712 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 127

Conread position: 1-221
Cow position: chr6:44078524-44078759 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 57

Conread position: 1-225
Cow position: chr6:19292804-19293044 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 230

Conread position: 1-228
Cow position: chr6:2078809-2078565 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 1-229
Cow position: chr6:58370764-58370999 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 28, 75

Conread position: 1-230
Cow position: chr6:37149195-37149434 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 26, 191

Conread position: 1-257
Cow position: chr6:18988218-18988473 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 28, 146

Conread position: 2-214
Cow position: chr6:24031386-24031600 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 30, 136

Conread position: 2-217
Cow position: chr6:57546214-57545989 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 46, 31

Conread position: 2-221
Cow position: chr6:19446260-19446497 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 27, 0

Conread position: 2-237
Cow position: chr6:21231531-21231771 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 163
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 139

Conread position: 3-204
Cow position: chr6:9832214-9832424 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 126

Conread position: 3-207
Cow position: chr6:63047601-63047806 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 11

Conread position: 3-223
Cow position: chr6:57405117-57404890 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 3-229
Cow position: chr6:26450322-26450551 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 133

Conread position: 5-210
Cow position: chr6:45596522-45596313 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 24, 103

Conread position: 6-148
Cow position: chr6:46330936-46331080 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 119

Conread position: 6-148
Cow position: chr6:67214760-67214909 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 6-150
Cow position: chr6:60667424-60667573 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 96

Conread position: 6-172
Cow position: chr6:21235053-21235226 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 26, 168

Conread position: 6-211
Cow position: chr6:34196140-34195928 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 23, 154

Conread position: 6-214
Cow position: chr6:65903613-65903389 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 17, 111

Conread position: 6-217
Cow position: chr6:16288047-16287827 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 185

Conread position: 6-217
Cow position: chr6:60740025-60740252 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 26, 0

Conread position: 6-221
Cow position: chr6:23453664-23453887 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 128

Conread position: 6-222
Cow position: chr6:36470551-36470333 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 27, 174

Conread position: 6-223
Cow position: chr6:45065006-45064789 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 176
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 20, 145

Conread position: 6-223
Cow position: chr6:54490722-54490500 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 178
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 23, 76

Conread position: 6-224
Cow position: chr6:143363-143132 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 23, 219

Conread position: 6-224
Cow position: chr6:28477180-28477396 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 147

Conread position: 6-227
Cow position: chr6:36454586-36454366 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 148

Conread position: 6-228
Cow position: chr6:2623792-2624019 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 62, 32

Conread position: 6-229
Cow position: chr6:10225636-10225400 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 136, 24

Conread position: 6-229
Cow position: chr6:28084003-28083780 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 15

Conread position: 6-229
Cow position: chr6:44623620-44623840 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 123

Conread position: 6-229
Cow position: chr6:46558068-46558306 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 123

Conread position: 6-229
Cow position: chr6:62539576-62539356 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 23, 64

Conread position: 6-230
Cow position: chr6:7190107-7189878 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 28, 196

Conread position: 6-233
Cow position: chr6:23401981-23401740 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 192
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 23, 72

Conread position: 6-236
Cow position: chr6:48803622-48803380 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 23, 84

Conread position: 6-256
Cow position: chr6:21004685-21004957 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 249

Conread position: 7-129
Cow position: chr6:36011917-36012043 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 7-138
Cow position: chr6:8788025-8787887 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 7-204
Cow position: chr6:39093761-39093972 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 125

Conread position: 7-205
Cow position: chr6:68047134-68046938 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 22, 96

Conread position: 7-212
Cow position: chr6:34235399-34235197 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 141

Conread position: 7-214
Cow position: chr6:2584954-2585177 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 122

Conread position: 7-214
Cow position: chr6:33450958-33450742 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 118

Conread position: 7-214
Cow position: chr6:60118162-60118379 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 115

Conread position: 7-215
Cow position: chr6:21061869-21061653 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 20, 60

Conread position: 7-217
Cow position: chr6:13367296-13367522 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 112

Conread position: 7-217
Cow position: chr6:37463034-37463245 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 138

Conread position: 7-220
Cow position: chr6:35990224-35989995 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 7-221
Cow position: chr6:1475357-1475581 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 22, 0

Conread position: 7-221
Cow position: chr6:47885011-47884801 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 64

Conread position: 7-223
Cow position: chr6:41656030-41655809 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 151

Conread position: 7-225
Cow position: chr6:67281907-67282131 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 185

Conread position: 7-226
Cow position: chr6:21535049-21535288 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 225

Conread position: 7-229
Cow position: chr6:2582872-2583112 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 96

Conread position: 7-229
Cow position: chr6:35181244-35181002 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 7-229
Cow position: chr6:55475267-55475489 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 146

Conread position: 7-233
Cow position: chr6:1703816-1704049 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 22, 91

Conread position: 7-233
Cow position: chr6:5330424-5330673 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 121

Conread position: 7-233
Cow position: chr6:7119607-7119376 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 25, 207

Conread position: 7-233
Cow position: chr6:55417517-55417276 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 7-237
Cow position: chr6:62371165-62370927 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 192

Conread position: 7-240
Cow position: chr6:65264530-65264287 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 7-248
Cow position: chr6:64431949-64432204 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 190
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 16, 123

Conread position: 7-250
Cow position: chr6:40637-40396 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 27, 89

Conread position: 7-276
Cow position: chr6:35436006-35436286 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 208
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 25, 253

Conread position: 8-194
Cow position: chr6:21736872-21736685 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 150
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 21, 54

Conread position: 8-212
Cow position: chr6:23532670-23532881 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 21, 83

Conread position: 8-212
Cow position: chr6:36645400-36645609 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 8-214
Cow position: chr6:2899556-2899347 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 21, 148

Conread position: 8-214
Cow position: chr6:52901250-52901454 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 152

Conread position: 8-217
Cow position: chr6:16700274-16700494 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 8-217
Cow position: chr6:32126069-32126292 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 89

Conread position: 8-217
Cow position: chr6:33206754-33206969 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 20, 32

Conread position: 8-220
Cow position: chr6:32268871-32268643 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 180
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 0

Conread position: 8-224
Cow position: chr6:20196286-20196079 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 21, 133

Conread position: 8-224
Cow position: chr6:30701459-30701670 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 15, 43

Conread position: 8-224
Cow position: chr6:40032204-40032426 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 8-224
Cow position: chr6:61575838-61576051 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 43

Conread position: 8-227
Cow position: chr6:6229714-6229936 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 97

Conread position: 8-227
Cow position: chr6:31564323-31564103 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 21, 146

Conread position: 8-229
Cow position: chr6:611564-611796 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 30, 102

Conread position: 8-239
Cow position: chr6:1429653-1429896 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 25, 121

Conread position: 9-156
Cow position: chr6:16707029-16707181 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 20, 0

Conread position: 9-206
Cow position: chr6:37395387-37395174 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 9-209
Cow position: chr6:38771299-38771503 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 19, 54

Conread position: 9-217
Cow position: chr6:28156146-28155933 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 5, 183

Conread position: 9-221
Cow position: chr6:33917826-33917613 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 145

Conread position: 9-227
Cow position: chr6:54127799-54127574 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 20, 88

Conread position: 9-229
Cow position: chr6:8688833-8688598 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 120

Conread position: 10-148
Cow position: chr6:24781540-24781400 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 97

Conread position: 10-229
Cow position: chr6:9008597-9008374 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 19, 143

Conread position: 11-212
Cow position: chr6:11262772-11262976 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 44, 10

Conread position: 11-214
Cow position: chr6:24004552-24004756 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 18, 140

Conread position: 11-218
Cow position: chr6:47306127-47305931 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 103

Conread position: 11-224
Cow position: chr6:66947802-66947573 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 11-235
Cow position: chr6:15300813-15300584 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 18, 209

Conread position: 14-230
Cow position: chr6:12338012-12338243 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 14-231
Cow position: chr6:17090621-17090834 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 9

Conread position: 17-212
Cow position: chr6:15172596-15172791 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 29, 119

Conread position: 17-229
Cow position: chr6:56715847-56716060 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 38

Conread position: 20-237
Cow position: chr6:30160351-30160560 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 104, 76

Conread position: 21-220
Cow position: chr6:47173999-47173794 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 24, 9

Conread position: 22-193
Cow position: chr6:17412529-17412357 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 20, 43

Conread position: 22-217
Cow position: chr6:66839227-66839433 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 24-228
Cow position: chr6:56850057-56850268 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 109, 14

Conread position: 26-229
Cow position: chr6:37994247-37994456 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 48, 17

Conread position: 27-225
Cow position: chr6:30825732-30825529 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 15, 178

Conread position: 32-256
Cow position: chr6:16352315-16352086 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 10, 156

Conread position: 33-221
Cow position: chr6:40833968-40833776 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 41

Conread position: 33-221
Cow position: chr6:47772922-47772737 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 123

Conread position: 34-228
Cow position: chr6:59297097-59297297 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 15, 0

Conread position: 36-221
Cow position: chr6:53024758-53024567 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 36-229
Cow position: chr6:53546081-53546281 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 37-212
Cow position: chr6:50504504-50504691 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 12, 0

Conread position: 38-211
Cow position: chr6:10105930-10105749 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 160

Conread position: 38-211
Cow position: chr6:47574955-47575125 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 113

Conread position: 38-212
Cow position: chr6:17068599-17068420 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 157

Conread position: 38-214
Cow position: chr6:22985806-22985625 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 38-218
Cow position: chr6:36652471-36652640 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 11, 80

Conread position: 38-221
Cow position: chr6:53939013-53939189 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 108

Conread position: 38-227
Cow position: chr6:23938109-23938300 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 178

Conread position: 38-229
Cow position: chr6:16090952-16091151 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 38-283
Cow position: chr6:7707183-7707420 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 10

Conread position: 39-233
Cow position: chr6:47192477-47192288 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 29, 61

Conread position: 40-224
Cow position: chr6:10612894-10613077 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 41-211
Cow position: chr6:53711451-53711637 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 41-230
Cow position: chr6:58725419-58725618 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 35

Conread position: 42-225
Cow position: chr6:66057825-66058002 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 7, 0

Conread position: 42-249
Cow position: chr6:21184170-21183948 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 7, 54

Conread position: 43-205
Cow position: chr6:15058427-15058603 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 43-211
Cow position: chr6:51933605-51933773 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 77

Conread position: 43-221
Cow position: chr6:45535756-45535579 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 146

Conread position: 43-229
Cow position: chr6:16411665-16411865 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 84, 79

Conread position: 43-229
Cow position: chr6:45921163-45920968 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 20, 83

Conread position: 44-217
Cow position: chr6:41226778-41226607 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 144

Conread position: 46-234
Cow position: chr6:26043796-26043992 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 48-148
Cow position: chr6:54867577-54867677 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 48-214
Cow position: chr6:49398560-49398392 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 48-223
Cow position: chr6:54294338-54294511 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 111, 0

Conread position: 48-225
Cow position: chr6:12500902-12501077 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 97

Conread position: 48-228
Cow position: chr6:37612164-37612338 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 51

Conread position: 48-233
Cow position: chr6:40262210-40262017 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 153

Conread position: 49-226
Cow position: chr6:34463524-34463341 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 150
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 94, 19

Conread position: 51-217
Cow position: chr6:62078986-62079158 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 92, 8

Conread position: 51-228
Cow position: chr6:4699771-4699956 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 95, 12

Conread position: 53-225
Cow position: chr6:43540185-43540014 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 21, 16

Conread position: 53-230
Cow position: chr6:16627800-16627982 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 13

Conread position: 55-217
Cow position: chr6:31225774-31225929 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 56-216
Cow position: chr6:48278821-48278656 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 81, 139

Conread position: 57-221
Cow position: chr6:63720269-63720433 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 87, 149

Conread position: 58-211
Cow position: chr6:32006385-32006222 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 58-212
Cow position: chr6:30023955-30024112 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 135

Conread position: 58-212
Cow position: chr6:34076231-34076398 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 69

Conread position: 58-217
Cow position: chr6:19259272-19259118 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 116, 86

Conread position: 58-217
Cow position: chr6:47391179-47391336 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 26, 90

Conread position: 58-221
Cow position: chr6:8966167-8966332 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 85, 0

Conread position: 58-221
Cow position: chr6:24468326-24468156 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 163

Conread position: 58-221
Cow position: chr6:39358271-39358098 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 58-226
Cow position: chr6:21293424-21293249 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 78, 36

Conread position: 58-228
Cow position: chr6:59603138-59602965 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 79, 157

Conread position: 58-229
Cow position: chr6:27219236-27219421 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 58-230
Cow position: chr6:29210565-29210730 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 58-230
Cow position: chr6:44194479-44194302 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 54

Conread position: 59-307
Cow position: chr6:54203986-54203743 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 89

Conread position: 60-212
Cow position: chr6:59265629-59265478 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 83, 0

Conread position: 60-212
Cow position: chr6:61109859-61110017 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 82, 30

Conread position: 61-237
Cow position: chr6:4755887-4756067 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 84

Conread position: 62-237
Cow position: chr6:7291389-7291568 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 81, 157

Conread position: 63-205
Cow position: chr6:23942585-23942446 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 64-204
Cow position: chr6:23594020-23594162 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 69, 0

Conread position: 66-224
Cow position: chr6:21175415-21175581 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 69-246
Cow position: chr6:6547427-6547244 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 97

Conread position: 74-234
Cow position: chr6:54406714-54406550 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 126

Conread position: 82-229
Cow position: chr6:12857895-12858035 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 133, 35

Conread position: 87-229
Cow position: chr6:59659263-59659405 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 20

Conread position: 91-221
Cow position: chr6:14915267-14915138 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 53, 73

Conread position: 117-217
Cow position: chr6:23173180-23173288 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 142-229
Cow position: chr6:16762464-16762377 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 144-226
Cow position: chr6:37603831-37603911 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 76
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 74, 0

Show alignments to all cow chromosomes.