Cow genome map
| Conread name: | Pig1-129C12 |
| Conread position: | 28-199 |
| Cow position: | chr10:1862313-1862141 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 135, 10 |
| Conread position: | 37-204 |
| Cow position: | chr10:19541623-19541451 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 37-240 |
| Cow position: | chr10:21373285-21373080 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 126, 13 |
| Conread position: | 37-240 |
| Cow position: | chr10:46080916-46080711 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 129, 17 |
| Conread position: | 37-486 |
| Cow position: | chr10:3648912-3648472 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 308 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 126, 89 |
| Conread position: | 37-486 |
| Cow position: | chr10:29496008-29495543 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 38 |
| Conread position: | 37-488 |
| Cow position: | chr10:69685990-69685535 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 17 |
| Conread position: | 37-501 |
| Cow position: | chr10:17179524-17179034 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 152 |
| Conread position: | 38-198 |
| Cow position: | chr10:23733664-23733823 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 136, 9 |
| Conread position: | 38-226 |
| Cow position: | chr10:32980885-32981074 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 122, 172 |
| Conread position: | 38-240 |
| Cow position: | chr10:19622084-19622290 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 125, 16 |
| Conread position: | 38-402 |
| Cow position: | chr10:23765293-23765653 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 136, 210 |
| Conread position: | 38-417 |
| Cow position: | chr10:65688829-65688437 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 266 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 13, 68 |
| Conread position: | 38-451 |
| Cow position: | chr10:40428326-40428732 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 280 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 137, 209 |
| Conread position: | 38-477 |
| Cow position: | chr10:10223252-10223708 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 38-480 |
| Cow position: | chr10:15381251-15381688 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 126, 17 |
| Conread position: | 38-486 |
| Cow position: | chr10:52647249-52647686 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 297 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 119, 76 |
| Conread position: | 38-486 |
| Cow position: | chr10:52665265-52665701 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 17, 70 |
| Conread position: | 38-486 |
| Cow position: | chr10:67566664-67567104 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 136, 206 |
| Conread position: | 38-491 |
| Cow position: | chr10:62613654-62613212 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 136, 210 |
| Conread position: | 42-224 |
| Cow position: | chr10:54966689-54966868 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 117, 7 |
| Conread position: | 42-486 |
| Cow position: | chr10:12538015-12537559 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 186 |
| Conread position: | 43-485 |
| Cow position: | chr10:58840349-58840795 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 306 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 14, 74 |
| Conread position: | 50-224 |
| Cow position: | chr10:38435147-38435315 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 110, 53 |
| Conread position: | 50-252 |
| Cow position: | chr10:41305651-41305445 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 116, 153 |
| Conread position: | 50-387 |
| Cow position: | chr10:50527900-50527567 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 32, 79 |
| Conread position: | 50-486 |
| Cow position: | chr10:726314-726749 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 301 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 114, 37 |
| Conread position: | 59-486 |
| Cow position: | chr10:4908856-4909300 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 143 |
| Conread position: | 63-460 |
| Cow position: | chr10:36474480-36474863 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 279 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 282, 11 |
| Conread position: | 68-511 |
| Cow position: | chr10:593003-592561 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 26 |
| Conread position: | 70-486 |
| Cow position: | chr10:46395986-46395582 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 281 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 112, 16 |
| Conread position: | 71-476 |
| Cow position: | chr10:28854897-28854479 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 134 |
| Conread position: | 74-487 |
| Cow position: | chr10:55305266-55305660 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 101, 34 |
| Conread position: | 76-486 |
| Cow position: | chr10:26023329-26023757 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 128 |
| Conread position: | 93-486 |
| Cow position: | chr10:63378711-63378323 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 136, 55 |
| Conread position: | 183-480 |
| Cow position: | chr10:66427481-66427792 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 71, 18 |
| Conread position: | 249-417 |
| Cow position: | chr10:8095056-8095236 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 251-514 |
| Cow position: | chr10:16804374-16804091 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 6, 232 |
| Conread position: | 257-475 |
| Cow position: | chr10:19651593-19651360 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 196 |
| Conread position: | 257-480 |
| Cow position: | chr10:68370668-68370908 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 74, 225 |
| Conread position: | 257-486 |
| Cow position: | chr10:32981079-32981315 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 86, 144 |
| Conread position: | 257-486 |
| Cow position: | chr10:54966884-54967109 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 165, 83 |
| Conread position: | 257-487 |
| Cow position: | chr10:34806642-34806404 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 88, 170 |
| Conread position: | 263-486 |
| Cow position: | chr10:63475459-63475231 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 82, 168 |
| Conread position: | 270-486 |
| Cow position: | chr10:38435331-38435559 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 75, 148 |
Show alignments to all cow chromosomes.