Cow genome map

Conread name: Pig1-129C12

Conread position: 15-288
Cow position: chr11:14674200-14673925 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 148, 42

Conread position: 29-486
Cow position: chr11:39277191-39276733 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 25

Conread position: 33-237
Cow position: chr11:80192312-80192518 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 164

Conread position: 37-234
Cow position: chr11:63989124-63988921 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 11, 169

Conread position: 37-240
Cow position: chr11:12167845-12167640 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 166

Conread position: 37-264
Cow position: chr11:58537851-58537616 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 129, 160

Conread position: 37-486
Cow position: chr11:896934-896494 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 293
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 137, 19

Conread position: 37-486
Cow position: chr11:39997652-39997214 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 303
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 145, 192

Conread position: 38-208
Cow position: chr11:40644541-40644711 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 136, 9

Conread position: 38-237
Cow position: chr11:59375042-59374842 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 143, 12

Conread position: 38-240
Cow position: chr11:20992512-20992309 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 88, 76

Conread position: 38-240
Cow position: chr11:61833442-61833652 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 38-312
Cow position: chr11:35576623-35576899 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 126, 17

Conread position: 38-317
Cow position: chr11:2545690-2545976 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 112, 16

Conread position: 38-344
Cow position: chr11:26232886-26232578 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 219
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 128, 90

Conread position: 38-445
Cow position: chr11:3161214-3160797 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 90

Conread position: 38-480
Cow position: chr11:63671677-63671247 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 294
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 136, 12

Conread position: 38-486
Cow position: chr11:7662107-7662579 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 320
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 122, 12

Conread position: 38-486
Cow position: chr11:32389437-32389876 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 299
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 216, 7

Conread position: 38-486
Cow position: chr11:49604297-49603861 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 290
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 37, 43

Conread position: 38-486
Cow position: chr11:70888522-70888076 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 307
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 12, 105

Conread position: 38-505
Cow position: chr11:5292855-5292378 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 165

Conread position: 46-237
Cow position: chr11:9754597-9754790 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 117, 137

Conread position: 46-486
Cow position: chr11:64813736-64814197 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 158

Conread position: 47-194
Cow position: chr11:80336054-80335905 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 47-239
Cow position: chr11:30216554-30216361 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 118, 154

Conread position: 47-467
Cow position: chr11:11684668-11685077 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 273
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 113, 28

Conread position: 47-476
Cow position: chr11:14134656-14135101 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 151

Conread position: 47-479
Cow position: chr11:37334514-37334968 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 47-486
Cow position: chr11:32206113-32205686 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 285
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 53, 163

Conread position: 47-505
Cow position: chr11:76600139-76599662 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 51

Conread position: 50-240
Cow position: chr11:66869968-66869777 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 118, 123

Conread position: 50-506
Cow position: chr11:5441466-5440987 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 153

Conread position: 51-480
Cow position: chr11:37319199-37319650 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 154

Conread position: 57-476
Cow position: chr11:38679669-38680101 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 42

Conread position: 60-386
Cow position: chr11:9739982-9740299 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 221
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 114, 80

Conread position: 67-346
Cow position: chr11:72416429-72416690 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 107, 181

Conread position: 68-485
Cow position: chr11:40366350-40366780 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 290
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 27, 141

Conread position: 71-486
Cow position: chr11:30084589-30084161 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 295
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 9, 48

Conread position: 81-486
Cow position: chr11:50649484-50649059 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 33

Conread position: 100-486
Cow position: chr11:77160969-77161370 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 104

Conread position: 215-486
Cow position: chr11:6575249-6575538 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 54

Conread position: 228-374
Cow position: chr11:58537631-58537475 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 0

Conread position: 243-486
Cow position: chr11:77178306-77178566 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 85, 0

Conread position: 249-486
Cow position: chr11:30766929-30766676 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 224

Conread position: 250-480
Cow position: chr11:81347760-81348005 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 84, 231

Conread position: 257-473
Cow position: chr11:63988918-63988701 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 110, 89

Conread position: 257-486
Cow position: chr11:26305393-26305151 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 71, 196

Conread position: 257-486
Cow position: chr11:62409360-62409129 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 87, 26

Conread position: 257-486
Cow position: chr11:66889683-66889917 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 106

Conread position: 271-481
Cow position: chr11:30216353-30216132 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 74, 0

Conread position: 272-500
Cow position: chr11:7050927-7051169 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 63, 114

Conread position: 310-480
Cow position: chr11:20991103-20990915 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 314-491
Cow position: chr11:76871393-76871196 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 333-476
Cow position: chr11:2546105-2546254 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 0

Show alignments to all cow chromosomes.