Cow genome map
Conread name: | Pig1-129C12 |
Conread position: | 15-288 |
Cow position: | chr11:14674200-14673925 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 191 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 148, 42 |
Conread position: | 29-486 |
Cow position: | chr11:39277191-39276733 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 25 |
Conread position: | 33-237 |
Cow position: | chr11:80192312-80192518 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 153 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 22, 164 |
Conread position: | 37-234 |
Cow position: | chr11:63989124-63988921 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 143 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 11, 169 |
Conread position: | 37-240 |
Cow position: | chr11:12167845-12167640 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 149 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 13, 166 |
Conread position: | 37-264 |
Cow position: | chr11:58537851-58537616 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 166 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 129, 160 |
Conread position: | 37-486 |
Cow position: | chr11:896934-896494 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 293 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 137, 19 |
Conread position: | 37-486 |
Cow position: | chr11:39997652-39997214 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 303 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 145, 192 |
Conread position: | 38-208 |
Cow position: | chr11:40644541-40644711 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 122 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 136, 9 |
Conread position: | 38-237 |
Cow position: | chr11:59375042-59374842 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 143 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 143, 12 |
Conread position: | 38-240 |
Cow position: | chr11:20992512-20992309 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 149 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 88, 76 |
Conread position: | 38-240 |
Cow position: | chr11:61833442-61833652 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 147 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 38-312 |
Cow position: | chr11:35576623-35576899 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 203 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 126, 17 |
Conread position: | 38-317 |
Cow position: | chr11:2545690-2545976 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 203 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 112, 16 |
Conread position: | 38-344 |
Cow position: | chr11:26232886-26232578 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 219 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 128, 90 |
Conread position: | 38-445 |
Cow position: | chr11:3161214-3160797 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 90 |
Conread position: | 38-480 |
Cow position: | chr11:63671677-63671247 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 294 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 136, 12 |
Conread position: | 38-486 |
Cow position: | chr11:7662107-7662579 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 320 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 122, 12 |
Conread position: | 38-486 |
Cow position: | chr11:32389437-32389876 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 299 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 216, 7 |
Conread position: | 38-486 |
Cow position: | chr11:49604297-49603861 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 290 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 37, 43 |
Conread position: | 38-486 |
Cow position: | chr11:70888522-70888076 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 307 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 12, 105 |
Conread position: | 38-505 |
Cow position: | chr11:5292855-5292378 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 165 |
Conread position: | 46-237 |
Cow position: | chr11:9754597-9754790 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 142 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 117, 137 |
Conread position: | 46-486 |
Cow position: | chr11:64813736-64814197 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 158 |
Conread position: | 47-194 |
Cow position: | chr11:80336054-80335905 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 109 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 127, 0 |
Conread position: | 47-239 |
Cow position: | chr11:30216554-30216361 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 141 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 118, 154 |
Conread position: | 47-467 |
Cow position: | chr11:11684668-11685077 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 273 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 113, 28 |
Conread position: | 47-476 |
Cow position: | chr11:14134656-14135101 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 151 |
Conread position: | 47-479 |
Cow position: | chr11:37334514-37334968 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 47-486 |
Cow position: | chr11:32206113-32205686 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 285 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 53, 163 |
Conread position: | 47-505 |
Cow position: | chr11:76600139-76599662 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 51 |
Conread position: | 50-240 |
Cow position: | chr11:66869968-66869777 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 136 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 118, 123 |
Conread position: | 50-506 |
Cow position: | chr11:5441466-5440987 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 153 |
Conread position: | 51-480 |
Cow position: | chr11:37319199-37319650 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 154 |
Conread position: | 57-476 |
Cow position: | chr11:38679669-38680101 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 42 |
Conread position: | 60-386 |
Cow position: | chr11:9739982-9740299 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 221 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 114, 80 |
Conread position: | 67-346 |
Cow position: | chr11:72416429-72416690 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 197 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 107, 181 |
Conread position: | 68-485 |
Cow position: | chr11:40366350-40366780 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 290 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 27, 141 |
Conread position: | 71-486 |
Cow position: | chr11:30084589-30084161 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 295 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 9, 48 |
Conread position: | 81-486 |
Cow position: | chr11:50649484-50649059 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 33 |
Conread position: | 100-486 |
Cow position: | chr11:77160969-77161370 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 104 |
Conread position: | 215-486 |
Cow position: | chr11:6575249-6575538 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 212 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 14, 54 |
Conread position: | 228-374 |
Cow position: | chr11:58537631-58537475 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 121 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 243-486 |
Cow position: | chr11:77178306-77178566 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 192 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 249-486 |
Cow position: | chr11:30766929-30766676 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 188 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 9, 224 |
Conread position: | 250-480 |
Cow position: | chr11:81347760-81348005 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 171 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 84, 231 |
Conread position: | 257-473 |
Cow position: | chr11:63988918-63988701 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 153 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 110, 89 |
Conread position: | 257-486 |
Cow position: | chr11:26305393-26305151 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 174 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 71, 196 |
Conread position: | 257-486 |
Cow position: | chr11:62409360-62409129 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 172 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 87, 26 |
Conread position: | 257-486 |
Cow position: | chr11:66889683-66889917 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 170 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 86, 106 |
Conread position: | 271-481 |
Cow position: | chr11:30216353-30216132 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 163 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 272-500 |
Cow position: | chr11:7050927-7051169 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 172 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 63, 114 |
Conread position: | 310-480 |
Cow position: | chr11:20991103-20990915 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 144 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 314-491 |
Cow position: | chr11:76871393-76871196 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 148 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 333-476 |
Cow position: | chr11:2546105-2546254 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 113 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.