Cow genome map
| Conread name: | Pig1-129C12 |
| Conread position: | 9-492 |
| Cow position: | chr12:5982656-5982143 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 12 |
| Conread position: | 37-237 |
| Cow position: | chr12:10853305-10853505 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 145, 10 |
| Conread position: | 38-346 |
| Cow position: | chr12:17690922-17691210 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 125, 9 |
| Conread position: | 38-346 |
| Cow position: | chr12:27133190-27133489 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 38-388 |
| Cow position: | chr12:5250895-5251236 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 136, 12 |
| Conread position: | 38-402 |
| Cow position: | chr12:9014327-9013979 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 240 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 194, 89 |
| Conread position: | 38-480 |
| Cow position: | chr12:15131486-15131952 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 38-480 |
| Cow position: | chr12:45704222-45703767 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 16 |
| Conread position: | 38-486 |
| Cow position: | chr12:36069546-36069080 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 9 |
| Conread position: | 38-486 |
| Cow position: | chr12:36251262-36251697 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 293 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 125, 38 |
| Conread position: | 38-513 |
| Cow position: | chr12:39115421-39114944 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 327 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 25, 154 |
| Conread position: | 42-317 |
| Cow position: | chr12:26173908-26174188 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 162 |
| Conread position: | 42-480 |
| Cow position: | chr12:42786478-42786044 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 159 |
| Conread position: | 43-491 |
| Cow position: | chr12:21268238-21268689 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 314 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 113, 11 |
| Conread position: | 45-485 |
| Cow position: | chr12:35638507-35638941 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 159 |
| Conread position: | 47-201 |
| Cow position: | chr12:42941284-42941129 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 119, 13 |
| Conread position: | 47-344 |
| Cow position: | chr12:32865514-32865811 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 52 |
| Conread position: | 47-417 |
| Cow position: | chr12:2004889-2005261 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 113, 152 |
| Conread position: | 47-492 |
| Cow position: | chr12:15073144-15072695 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 295 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 166, 123 |
| Conread position: | 50-476 |
| Cow position: | chr12:13634456-13634893 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 102 |
| Conread position: | 63-234 |
| Cow position: | chr12:30446691-30446518 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 100, 113 |
| Conread position: | 66-486 |
| Cow position: | chr12:16082070-16081631 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 10 |
| Conread position: | 71-344 |
| Cow position: | chr12:8493810-8494066 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 96, 132 |
| Conread position: | 71-480 |
| Cow position: | chr12:16909009-16908587 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 88, 10 |
| Conread position: | 71-486 |
| Cow position: | chr12:4146482-4146073 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 92, 110 |
| Conread position: | 71-516 |
| Cow position: | chr12:6932014-6931548 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 130 |
| Conread position: | 108-480 |
| Cow position: | chr12:31871254-31870874 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 56 |
| Conread position: | 163-346 |
| Cow position: | chr12:6689713-6689526 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 39 |
| Conread position: | 249-449 |
| Cow position: | chr12:31608858-31608639 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 249-486 |
| Cow position: | chr12:20225489-20225735 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 98, 119 |
| Conread position: | 249-486 |
| Cow position: | chr12:39177725-39177480 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 79, 206 |
| Conread position: | 256-486 |
| Cow position: | chr12:42941094-42940851 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 90, 26 |
| Conread position: | 257-344 |
| Cow position: | chr12:30446515-30446428 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 257-480 |
| Cow position: | chr12:30531717-30531955 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 87, 224 |
| Conread position: | 281-507 |
| Cow position: | chr12:41777829-41778070 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 307-486 |
| Cow position: | chr12:26174407-26174598 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.