Cow genome map
| Conread name: | Pig1-129C12 |
| Conread position: | 29-486 |
| Cow position: | chr14:3926159-3925689 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 19, 6 |
| Conread position: | 33-486 |
| Cow position: | chr14:45764114-45763643 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 17 |
| Conread position: | 35-346 |
| Cow position: | chr14:21875619-21875325 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 22, 213 |
| Conread position: | 37-486 |
| Cow position: | chr14:35172978-35172538 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 309 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 126, 10 |
| Conread position: | 38-206 |
| Cow position: | chr14:10734851-10735020 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 125, 12 |
| Conread position: | 38-234 |
| Cow position: | chr14:43220180-43219983 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 17, 98 |
| Conread position: | 38-237 |
| Cow position: | chr14:9580671-9580470 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 38-247 |
| Cow position: | chr14:21998306-21998518 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 38-338 |
| Cow position: | chr14:37769041-37768754 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 17, 159 |
| Conread position: | 38-345 |
| Cow position: | chr14:44481558-44481248 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 220 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 124, 18 |
| Conread position: | 38-355 |
| Cow position: | chr14:25151084-25151397 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 115, 26 |
| Conread position: | 38-454 |
| Cow position: | chr14:37448309-37447905 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 128, 9 |
| Conread position: | 38-486 |
| Cow position: | chr14:31380951-31380487 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 37 |
| Conread position: | 38-486 |
| Cow position: | chr14:42409226-42409676 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 19 |
| Conread position: | 38-486 |
| Cow position: | chr14:46564478-46564946 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 163 |
| Conread position: | 39-346 |
| Cow position: | chr14:1454629-1454344 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 135, 77 |
| Conread position: | 39-472 |
| Cow position: | chr14:1208984-1208562 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 184, 141 |
| Conread position: | 39-477 |
| Cow position: | chr14:48105263-48104818 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 15 |
| Conread position: | 39-522 |
| Cow position: | chr14:11672613-11672114 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 324 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 123, 15 |
| Conread position: | 40-479 |
| Cow position: | chr14:2326377-2326804 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 291 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 124, 159 |
| Conread position: | 40-486 |
| Cow position: | chr14:46046532-46046058 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 17 |
| Conread position: | 42-238 |
| Cow position: | chr14:21776905-21776706 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 42-505 |
| Cow position: | chr14:25170873-25170403 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 39 |
| Conread position: | 47-480 |
| Cow position: | chr14:32797522-32797959 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 157 |
| Conread position: | 47-480 |
| Cow position: | chr14:46582975-46582518 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 159 |
| Conread position: | 47-486 |
| Cow position: | chr14:3332896-3332477 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 300 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 301, 30 |
| Conread position: | 47-486 |
| Cow position: | chr14:14779270-14778810 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 75 |
| Conread position: | 49-486 |
| Cow position: | chr14:45595307-45594862 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 149 |
| Conread position: | 50-240 |
| Cow position: | chr14:26186100-26186293 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 113, 137 |
| Conread position: | 50-486 |
| Cow position: | chr14:12299382-12299839 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 74 |
| Conread position: | 50-486 |
| Cow position: | chr14:25988358-25988814 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 154 |
| Conread position: | 57-480 |
| Cow position: | chr14:3168163-3168591 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 146 |
| Conread position: | 67-486 |
| Cow position: | chr14:29712684-29712258 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 53 |
| Conread position: | 130-486 |
| Cow position: | chr14:35049217-35049589 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 33, 22 |
| Conread position: | 222-387 |
| Cow position: | chr14:46952787-46952961 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 123, 34 |
| Conread position: | 257-390 |
| Cow position: | chr14:8217397-8217539 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 87, 49 |
| Conread position: | 257-480 |
| Cow position: | chr14:12369360-12369599 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 73, 144 |
| Conread position: | 258-402 |
| Cow position: | chr14:21998508-21998661 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 258-450 |
| Cow position: | chr14:43219983-43219783 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 74, 6 |
| Conread position: | 295-486 |
| Cow position: | chr14:45572417-45572622 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 50, 107 |
Show alignments to all cow chromosomes.