Cow genome map
| Conread name: | Pig1-129C12 |
| Conread position: | 31-486 |
| Cow position: | chr15:12799134-12799576 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 294 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 143, 5 |
| Conread position: | 33-491 |
| Cow position: | chr15:18675386-18675858 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 22 |
| Conread position: | 37-344 |
| Cow position: | chr15:48107251-48107541 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 37-415 |
| Cow position: | chr15:45696134-45696522 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 276 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 12, 117 |
| Conread position: | 37-486 |
| Cow position: | chr15:15632417-15632877 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 17 |
| Conread position: | 37-487 |
| Cow position: | chr15:19728543-19729010 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 168 |
| Conread position: | 38-233 |
| Cow position: | chr15:45003065-45002865 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 17, 149 |
| Conread position: | 38-240 |
| Cow position: | chr15:37975217-37975418 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 136, 9 |
| Conread position: | 38-240 |
| Cow position: | chr15:45509374-45509586 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 98, 171 |
| Conread position: | 38-256 |
| Cow position: | chr15:870504-870284 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 128, 18 |
| Conread position: | 38-390 |
| Cow position: | chr15:8438808-8439150 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 124, 9 |
| Conread position: | 38-420 |
| Cow position: | chr15:14418549-14418148 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 275 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 124, 16 |
| Conread position: | 38-475 |
| Cow position: | chr15:6446992-6447454 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 170 |
| Conread position: | 38-475 |
| Cow position: | chr15:34170797-34170363 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 16 |
| Conread position: | 38-476 |
| Cow position: | chr15:14470569-14471013 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 303 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 33, 121 |
| Conread position: | 38-486 |
| Cow position: | chr15:16432181-16431739 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 301 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 181, 17 |
| Conread position: | 38-486 |
| Cow position: | chr15:37110068-37110505 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 287 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 136, 12 |
| Conread position: | 38-486 |
| Cow position: | chr15:53189191-53189623 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 136, 99 |
| Conread position: | 38-503 |
| Cow position: | chr15:44997606-44998093 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 165 |
| Conread position: | 38-513 |
| Cow position: | chr15:51240918-51241412 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 166 |
| Conread position: | 39-486 |
| Cow position: | chr15:19935038-19934609 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 134, 11 |
| Conread position: | 40-486 |
| Cow position: | chr15:13994943-13994503 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 134, 207 |
| Conread position: | 40-486 |
| Cow position: | chr15:25466552-25466093 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 16 |
| Conread position: | 42-477 |
| Cow position: | chr15:8439283-8439740 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 42-479 |
| Cow position: | chr15:47622952-47623378 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 136, 30 |
| Conread position: | 47-240 |
| Cow position: | chr15:675252-675057 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 116, 128 |
| Conread position: | 47-240 |
| Cow position: | chr15:29882996-29882803 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 181, 135 |
| Conread position: | 47-463 |
| Cow position: | chr15:49129967-49130391 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 135 |
| Conread position: | 49-486 |
| Cow position: | chr15:18212637-18213074 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 111, 21 |
| Conread position: | 50-237 |
| Cow position: | chr15:29605782-29605595 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 113, 133 |
| Conread position: | 50-344 |
| Cow position: | chr15:10609873-10610169 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 7, 125 |
| Conread position: | 51-505 |
| Cow position: | chr15:50442407-50441930 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 166 |
| Conread position: | 57-374 |
| Cow position: | chr15:11759587-11759915 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 145 |
| Conread position: | 63-450 |
| Cow position: | chr15:35449293-35449692 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 140 |
| Conread position: | 65-478 |
| Cow position: | chr15:5844655-5845057 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 277 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 109, 159 |
| Conread position: | 71-259 |
| Cow position: | chr15:22739884-22739695 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 89, 112 |
| Conread position: | 75-486 |
| Cow position: | chr15:1304730-1304296 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 134 |
| Conread position: | 88-345 |
| Cow position: | chr15:33611496-33611755 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 76, 89 |
| Conread position: | 95-486 |
| Cow position: | chr15:32659789-32660197 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 71, 112 |
| Conread position: | 222-486 |
| Cow position: | chr15:17005504-17005226 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 108, 38 |
| Conread position: | 248-486 |
| Cow position: | chr15:3054463-3054228 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 134, 41 |
| Conread position: | 248-486 |
| Cow position: | chr15:17189731-17189985 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 97, 68 |
| Conread position: | 257-438 |
| Cow position: | chr15:22548311-22548122 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 257-486 |
| Cow position: | chr15:22739717-22739493 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 172, 62 |
| Conread position: | 258-486 |
| Cow position: | chr15:29605594-29605366 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 107, 96 |
| Conread position: | 272-486 |
| Cow position: | chr15:20128654-20128886 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 63, 203 |
| Conread position: | 295-486 |
| Cow position: | chr15:32432391-32432599 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 35, 178 |
| Conread position: | 327-476 |
| Cow position: | chr15:33464666-33464822 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.