Cow genome map
| Conread name: | Pig1-129C12 |
| Conread position: | 32-344 |
| Cow position: | chr16:40511675-40511376 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 16, 171 |
| Conread position: | 37-237 |
| Cow position: | chr16:40415937-40415733 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 64 |
| Conread position: | 37-238 |
| Cow position: | chr16:11764111-11764309 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 137, 13 |
| Conread position: | 37-252 |
| Cow position: | chr16:10933626-10933422 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 37-486 |
| Cow position: | chr16:6724943-6725380 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 302 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 126, 13 |
| Conread position: | 38-198 |
| Cow position: | chr16:47364949-47365112 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 38-209 |
| Cow position: | chr16:51083683-51083859 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 168 |
| Conread position: | 38-213 |
| Cow position: | chr16:50231337-50231160 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 17, 145 |
| Conread position: | 38-217 |
| Cow position: | chr16:35445622-35445808 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 19, 170 |
| Conread position: | 38-237 |
| Cow position: | chr16:19941963-19942159 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 135, 9 |
| Conread position: | 38-238 |
| Cow position: | chr16:31128607-31128809 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 38-244 |
| Cow position: | chr16:56210388-56210178 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 112, 165 |
| Conread position: | 38-337 |
| Cow position: | chr16:15257917-15258201 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 16, 167 |
| Conread position: | 38-402 |
| Cow position: | chr16:17734650-17734305 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 241, 105 |
| Conread position: | 38-486 |
| Cow position: | chr16:11484409-11484853 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 302 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 126, 16 |
| Conread position: | 38-486 |
| Cow position: | chr16:17163102-17162635 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 38-486 |
| Cow position: | chr16:21725596-21726030 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 129, 158 |
| Conread position: | 38-486 |
| Cow position: | chr16:33377708-33377255 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 17 |
| Conread position: | 38-486 |
| Cow position: | chr16:33435405-33435863 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 16 |
| Conread position: | 38-486 |
| Cow position: | chr16:33710428-33710859 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 314 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 144, 12 |
| Conread position: | 38-486 |
| Cow position: | chr16:37100498-37100956 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 12 |
| Conread position: | 38-486 |
| Cow position: | chr16:55132286-55132720 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 136, 88 |
| Conread position: | 38-491 |
| Cow position: | chr16:40502020-40501567 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 91 |
| Conread position: | 40-475 |
| Cow position: | chr16:40521757-40522210 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 17 |
| Conread position: | 40-480 |
| Cow position: | chr16:55127355-55126928 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 123, 16 |
| Conread position: | 42-237 |
| Cow position: | chr16:23385511-23385707 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 132, 53 |
| Conread position: | 42-385 |
| Cow position: | chr16:23923926-23923590 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 141, 84 |
| Conread position: | 44-480 |
| Cow position: | chr16:13513114-13513572 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 91 |
| Conread position: | 45-480 |
| Cow position: | chr16:33439179-33439622 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 307 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 121, 10 |
| Conread position: | 46-344 |
| Cow position: | chr16:33903384-33903100 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 117, 137 |
| Conread position: | 46-486 |
| Cow position: | chr16:571669-571219 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 8 |
| Conread position: | 47-476 |
| Cow position: | chr16:48895553-48895992 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 8 |
| Conread position: | 47-484 |
| Cow position: | chr16:14182957-14182530 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 113, 154 |
| Conread position: | 47-523 |
| Cow position: | chr16:12093240-12092758 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 333 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 113, 160 |
| Conread position: | 49-534 |
| Cow position: | chr16:24586565-24587049 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 320 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 106, 192 |
| Conread position: | 50-486 |
| Cow position: | chr16:43860864-43861301 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 152 |
| Conread position: | 50-510 |
| Cow position: | chr16:411961-412433 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 154 |
| Conread position: | 56-488 |
| Cow position: | chr16:44460207-44460658 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 13 |
| Conread position: | 68-488 |
| Cow position: | chr16:16724515-16724920 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 25 |
| Conread position: | 72-240 |
| Cow position: | chr16:34027954-34028126 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 92, 131 |
| Conread position: | 80-485 |
| Cow position: | chr16:10669685-10669261 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 113 |
| Conread position: | 246-374 |
| Cow position: | chr16:34028111-34028248 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 98, 63 |
| Conread position: | 256-513 |
| Cow position: | chr16:50508001-50508275 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 69, 12 |
| Conread position: | 257-506 |
| Cow position: | chr16:35445830-35446076 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 118, 65 |
| Conread position: | 258-486 |
| Cow position: | chr16:33531447-33531211 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 87, 215 |
| Conread position: | 263-480 |
| Cow position: | chr16:49910826-49911060 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 67, 40 |
| Conread position: | 291-480 |
| Cow position: | chr16:56209793-56209585 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 24, 193 |
Show alignments to all cow chromosomes.