Cow genome map
| Conread name: | Pig1-129C12 |
| Conread position: | 29-480 |
| Cow position: | chr18:51804291-51803826 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 9 |
| Conread position: | 33-486 |
| Cow position: | chr18:15807195-15807638 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 300 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 120, 150 |
| Conread position: | 36-457 |
| Cow position: | chr18:46864735-46865180 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 37-225 |
| Cow position: | chr18:46639535-46639724 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 126, 13 |
| Conread position: | 37-237 |
| Cow position: | chr18:9257665-9257463 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 37-237 |
| Cow position: | chr18:37078947-37078747 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 137, 17 |
| Conread position: | 37-402 |
| Cow position: | chr18:15946201-15946556 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 137, 37 |
| Conread position: | 37-474 |
| Cow position: | chr18:12779367-12778923 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 309 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 177, 17 |
| Conread position: | 37-486 |
| Cow position: | chr18:24635784-24636236 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 18 |
| Conread position: | 37-486 |
| Cow position: | chr18:29884586-29885037 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 129 |
| Conread position: | 38-234 |
| Cow position: | chr18:43794670-43794475 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 125, 12 |
| Conread position: | 38-247 |
| Cow position: | chr18:49879520-49879731 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 125, 138 |
| Conread position: | 38-305 |
| Cow position: | chr18:32199081-32199339 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 53, 20 |
| Conread position: | 38-346 |
| Cow position: | chr18:30228312-30228621 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 170 |
| Conread position: | 38-395 |
| Cow position: | chr18:40702124-40701770 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 124, 9 |
| Conread position: | 38-467 |
| Cow position: | chr18:4699143-4699592 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 109 |
| Conread position: | 38-468 |
| Cow position: | chr18:25700984-25700556 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 303 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 55, 17 |
| Conread position: | 38-480 |
| Cow position: | chr18:24799306-24798846 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 19 |
| Conread position: | 38-486 |
| Cow position: | chr18:49386100-49386538 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 144, 128 |
| Conread position: | 38-486 |
| Cow position: | chr18:54128581-54128142 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 300 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 136, 203 |
| Conread position: | 38-498 |
| Cow position: | chr18:3689678-3689227 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 320 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 136, 12 |
| Conread position: | 46-234 |
| Cow position: | chr18:25694506-25694695 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 117, 108 |
| Conread position: | 46-234 |
| Cow position: | chr18:52440007-52440193 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 134, 97 |
| Conread position: | 47-348 |
| Cow position: | chr18:44136915-44137212 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 66, 47 |
| Conread position: | 47-480 |
| Cow position: | chr18:51780186-51779740 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 157 |
| Conread position: | 47-496 |
| Cow position: | chr18:46883055-46883527 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 39 |
| Conread position: | 49-343 |
| Cow position: | chr18:25670584-25670286 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 155 |
| Conread position: | 50-486 |
| Cow position: | chr18:35087327-35086892 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 287 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 116, 152 |
| Conread position: | 64-402 |
| Cow position: | chr18:8284167-8283833 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 110, 184 |
| Conread position: | 203-486 |
| Cow position: | chr18:11268719-11268416 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 26, 283 |
| Conread position: | 256-488 |
| Cow position: | chr18:13788390-13788140 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 283-471 |
| Cow position: | chr18:48310374-48310578 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 62, 0 |
Show alignments to all cow chromosomes.