Cow genome map
| Conread name: | Pig1-129C12 |
| Conread position: | 1-513 |
| Cow position: | chr2:69130879-69131423 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 12 |
| Conread position: | 35-444 |
| Cow position: | chr2:9946574-9946994 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 169 |
| Conread position: | 35-477 |
| Cow position: | chr2:82293493-82293924 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 20, 210 |
| Conread position: | 35-486 |
| Cow position: | chr2:20910573-20910123 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 127, 15 |
| Conread position: | 36-214 |
| Cow position: | chr2:68157402-68157580 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 138, 14 |
| Conread position: | 37-216 |
| Cow position: | chr2:9393497-9393676 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 126, 10 |
| Conread position: | 37-234 |
| Cow position: | chr2:68350398-68350199 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 37-238 |
| Cow position: | chr2:44547113-44546911 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 137, 26 |
| Conread position: | 37-240 |
| Cow position: | chr2:44687542-44687747 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 126, 13 |
| Conread position: | 37-331 |
| Cow position: | chr2:82294059-82294347 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 192 |
| Conread position: | 37-380 |
| Cow position: | chr2:36417482-36417146 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 126, 19 |
| Conread position: | 37-401 |
| Cow position: | chr2:56300747-56300392 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 62, 10 |
| Conread position: | 37-480 |
| Cow position: | chr2:41778813-41779271 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 17 |
| Conread position: | 37-491 |
| Cow position: | chr2:39255484-39255036 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 166 |
| Conread position: | 38-231 |
| Cow position: | chr2:20909039-20909231 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 124, 77 |
| Conread position: | 38-237 |
| Cow position: | chr2:47921639-47921438 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 38-240 |
| Cow position: | chr2:3472883-3473086 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 144, 9 |
| Conread position: | 38-240 |
| Cow position: | chr2:47384302-47384099 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 136, 9 |
| Conread position: | 38-375 |
| Cow position: | chr2:29192076-29191732 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 38-445 |
| Cow position: | chr2:15263393-15263813 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 12 |
| Conread position: | 38-457 |
| Cow position: | chr2:40299461-40299875 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 294 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 141, 9 |
| Conread position: | 38-479 |
| Cow position: | chr2:35971283-35971749 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 19 |
| Conread position: | 38-480 |
| Cow position: | chr2:1479519-1479949 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 125, 34 |
| Conread position: | 38-480 |
| Cow position: | chr2:12693450-12693018 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 287 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 136, 12 |
| Conread position: | 38-480 |
| Cow position: | chr2:85010152-85009696 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 16 |
| Conread position: | 38-486 |
| Cow position: | chr2:44683986-44683548 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 279 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 125, 12 |
| Conread position: | 38-486 |
| Cow position: | chr2:81186159-81185699 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 168 |
| Conread position: | 38-486 |
| Cow position: | chr2:82301215-82301651 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 296 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 136, 12 |
| Conread position: | 38-486 |
| Cow position: | chr2:85383119-85383586 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 12 |
| Conread position: | 39-252 |
| Cow position: | chr2:12767900-12768112 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 135, 15 |
| Conread position: | 39-486 |
| Cow position: | chr2:35984369-35984827 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 16 |
| Conread position: | 42-237 |
| Cow position: | chr2:83889767-83889567 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 42-389 |
| Cow position: | chr2:34293190-34292846 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 54 |
| Conread position: | 42-480 |
| Cow position: | chr2:66671336-66670879 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 162 |
| Conread position: | 44-344 |
| Cow position: | chr2:46204711-46205007 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 214 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 185, 126 |
| Conread position: | 46-234 |
| Cow position: | chr2:45110272-45110078 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 47-239 |
| Cow position: | chr2:69133623-69133818 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 117, 156 |
| Conread position: | 47-316 |
| Cow position: | chr2:37080084-37079815 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 115, 155 |
| Conread position: | 47-318 |
| Cow position: | chr2:39878371-39878111 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 119, 45 |
| Conread position: | 47-455 |
| Cow position: | chr2:45927497-45927930 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 266 |
| Conread position: | 50-244 |
| Cow position: | chr2:28918579-28918774 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 132, 44 |
| Conread position: | 56-240 |
| Cow position: | chr2:45933929-45934118 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 36, 146 |
| Conread position: | 56-417 |
| Cow position: | chr2:68427100-68426725 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 19 |
| Conread position: | 56-420 |
| Cow position: | chr2:23043264-23043621 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 109, 147 |
| Conread position: | 57-345 |
| Cow position: | chr2:86326781-86327071 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 115, 109 |
| Conread position: | 59-326 |
| Cow position: | chr2:83144567-83144834 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 107 |
| Conread position: | 70-488 |
| Cow position: | chr2:24509062-24508643 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 291 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 96, 49 |
| Conread position: | 133-486 |
| Cow position: | chr2:40853440-40853076 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 43, 21 |
| Conread position: | 150-486 |
| Cow position: | chr2:35978558-35978884 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 196, 28 |
| Conread position: | 246-480 |
| Cow position: | chr2:44039771-44039530 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 130, 99 |
| Conread position: | 249-479 |
| Cow position: | chr2:49909170-49909410 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 249-486 |
| Cow position: | chr2:21336531-21336282 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 99, 163 |
| Conread position: | 251-479 |
| Cow position: | chr2:47149918-47150163 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 5, 219 |
| Conread position: | 257-486 |
| Cow position: | chr2:7316832-7316594 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 87, 147 |
| Conread position: | 257-486 |
| Cow position: | chr2:25375839-25375594 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 187 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 257-486 |
| Cow position: | chr2:33630663-33630902 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 22, 150 |
| Conread position: | 257-492 |
| Cow position: | chr2:46565028-46565280 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 88, 224 |
| Conread position: | 264-473 |
| Cow position: | chr2:46567024-46567248 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 46, 33 |
| Conread position: | 264-487 |
| Cow position: | chr2:44972655-44972426 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 56 |
| Conread position: | 265-486 |
| Cow position: | chr2:68157602-68157830 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 141 |
| Conread position: | 272-507 |
| Cow position: | chr2:41586119-41586370 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 63, 199 |
| Conread position: | 281-486 |
| Cow position: | chr2:69133833-69134051 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 62, 170 |
| Conread position: | 308-486 |
| Cow position: | chr2:65721171-65721364 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 38, 93 |
Show alignments to all cow chromosomes.