Cow genome map
| Conread name: | Pig1-129C12 |
| Conread position: | 27-488 |
| Cow position: | chr20:8298296-8297810 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 27 |
| Conread position: | 35-479 |
| Cow position: | chr20:40526994-40527428 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 289 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 125, 12 |
| Conread position: | 37-224 |
| Cow position: | chr20:13125911-13125728 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 123, 112 |
| Conread position: | 37-486 |
| Cow position: | chr20:649618-649175 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 18 |
| Conread position: | 38-199 |
| Cow position: | chr20:31430434-31430597 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 130, 65 |
| Conread position: | 38-237 |
| Cow position: | chr20:28820044-28820242 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 136, 104 |
| Conread position: | 38-249 |
| Cow position: | chr20:32949433-32949219 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 124, 166 |
| Conread position: | 38-250 |
| Cow position: | chr20:31439755-31439969 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 125, 16 |
| Conread position: | 38-388 |
| Cow position: | chr20:13080339-13079971 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 52, 16 |
| Conread position: | 38-395 |
| Cow position: | chr20:17673775-17674129 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 136, 9 |
| Conread position: | 38-486 |
| Cow position: | chr20:24340559-24340100 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 39 |
| Conread position: | 38-486 |
| Cow position: | chr20:41157105-41157570 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 22 |
| Conread position: | 38-491 |
| Cow position: | chr20:3532191-3531748 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 291 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 38-492 |
| Cow position: | chr20:22412538-22412979 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 38-516 |
| Cow position: | chr20:37058925-37059427 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 166 |
| Conread position: | 42-218 |
| Cow position: | chr20:35181292-35181475 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 114, 160 |
| Conread position: | 45-342 |
| Cow position: | chr20:8964485-8964783 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 121, 90 |
| Conread position: | 46-237 |
| Cow position: | chr20:3057731-3057915 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 47-234 |
| Cow position: | chr20:10508560-10508376 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 47-240 |
| Cow position: | chr20:23921317-23921511 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 119, 154 |
| Conread position: | 47-343 |
| Cow position: | chr20:2226835-2227117 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 214 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 47-486 |
| Cow position: | chr20:19030966-19030515 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 156 |
| Conread position: | 47-491 |
| Cow position: | chr20:13083086-13083529 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 116, 155 |
| Conread position: | 48-237 |
| Cow position: | chr20:2210508-2210699 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 7, 47 |
| Conread position: | 50-233 |
| Cow position: | chr20:28137933-28137757 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 50-467 |
| Cow position: | chr20:33711279-33711678 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 113, 54 |
| Conread position: | 51-240 |
| Cow position: | chr20:35434368-35434559 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 111, 152 |
| Conread position: | 74-507 |
| Cow position: | chr20:37910710-37911146 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 309 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 9, 131 |
| Conread position: | 100-486 |
| Cow position: | chr20:13282473-13282075 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 276 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 67, 103 |
| Conread position: | 162-417 |
| Cow position: | chr20:40203893-40204158 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 60, 42 |
| Conread position: | 180-471 |
| Cow position: | chr20:25039206-25038899 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 200-480 |
| Cow position: | chr20:33098103-33098404 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 50, 31 |
| Conread position: | 242-455 |
| Cow position: | chr20:33667721-33667504 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 35, 160 |
| Conread position: | 247-486 |
| Cow position: | chr20:13124848-13124585 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 97, 149 |
| Conread position: | 249-458 |
| Cow position: | chr20:35181521-35181738 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 96, 23 |
| Conread position: | 249-486 |
| Cow position: | chr20:35251507-35251756 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 97, 53 |
| Conread position: | 249-491 |
| Cow position: | chr20:23921499-23921749 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 249-499 |
| Cow position: | chr20:1511809-1511553 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 95, 79 |
| Conread position: | 257-385 |
| Cow position: | chr20:31431125-31431264 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 257-486 |
| Cow position: | chr20:22682159-22681924 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 59, 40 |
Show alignments to all cow chromosomes.