Cow genome map
| Conread name: | Pig1-129C12 |
| Conread position: | 15-364 |
| Cow position: | chr21:2802358-2802705 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 35-480 |
| Cow position: | chr21:47356251-47356713 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 12 |
| Conread position: | 37-194 |
| Cow position: | chr21:8375027-8375187 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 37-240 |
| Cow position: | chr21:13861320-13861118 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 127, 13 |
| Conread position: | 37-486 |
| Cow position: | chr21:32404948-32404503 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 64, 13 |
| Conread position: | 37-487 |
| Cow position: | chr21:19866558-19867002 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 41 |
| Conread position: | 38-231 |
| Cow position: | chr21:41413043-41413233 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 135, 9 |
| Conread position: | 38-238 |
| Cow position: | chr21:3967077-3966875 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 38-240 |
| Cow position: | chr21:18485499-18485704 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 128, 19 |
| Conread position: | 38-304 |
| Cow position: | chr21:10171119-10170854 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 127, 17 |
| Conread position: | 38-417 |
| Cow position: | chr21:41070875-41070468 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 284 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 49, 183 |
| Conread position: | 38-486 |
| Cow position: | chr21:19092273-19092711 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 16 |
| Conread position: | 38-486 |
| Cow position: | chr21:20015758-20016235 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 12 |
| Conread position: | 38-486 |
| Cow position: | chr21:28768637-28768176 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 16 |
| Conread position: | 38-488 |
| Cow position: | chr21:21407417-21407885 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 17 |
| Conread position: | 39-240 |
| Cow position: | chr21:24935968-24935765 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 42-240 |
| Cow position: | chr21:10555907-10556111 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 8, 162 |
| Conread position: | 42-343 |
| Cow position: | chr21:10237873-10237577 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 122, 15 |
| Conread position: | 47-215 |
| Cow position: | chr21:1500656-1500487 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 116, 67 |
| Conread position: | 47-216 |
| Cow position: | chr21:42180528-42180359 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 116, 95 |
| Conread position: | 47-233 |
| Cow position: | chr21:41526991-41526805 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 127, 22 |
| Conread position: | 47-252 |
| Cow position: | chr21:36209687-36209896 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 100, 150 |
| Conread position: | 47-374 |
| Cow position: | chr21:12208301-12208641 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 158 |
| Conread position: | 47-486 |
| Cow position: | chr21:18171524-18171981 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 33 |
| Conread position: | 50-480 |
| Cow position: | chr21:42853372-42853799 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 113, 188 |
| Conread position: | 58-475 |
| Cow position: | chr21:18571591-18572010 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 296 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 101, 149 |
| Conread position: | 63-344 |
| Cow position: | chr21:40724740-40725009 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 110, 43 |
| Conread position: | 65-486 |
| Cow position: | chr21:14787140-14787551 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 296 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 98, 173 |
| Conread position: | 67-360 |
| Cow position: | chr21:3962188-3961895 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 95, 21 |
| Conread position: | 68-473 |
| Cow position: | chr21:7402454-7402856 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 26, 135 |
| Conread position: | 71-454 |
| Cow position: | chr21:35323062-35322652 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 136 |
| Conread position: | 76-253 |
| Cow position: | chr21:14016303-14016124 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 87, 106 |
| Conread position: | 76-253 |
| Cow position: | chr21:14024584-14024405 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 87, 106 |
| Conread position: | 179-477 |
| Cow position: | chr21:8375458-8375763 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 249-491 |
| Cow position: | chr21:42179869-42179607 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 96, 236 |
| Conread position: | 257-486 |
| Cow position: | chr21:10556311-10556559 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 257-486 |
| Cow position: | chr21:28391787-28391550 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 124 |
| Conread position: | 257-491 |
| Cow position: | chr21:36212069-36212312 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 88, 119 |
Show alignments to all cow chromosomes.