Cow genome map
| Conread name: | Pig1-129C12 |
| Conread position: | 35-438 |
| Cow position: | chr27:26502263-26501852 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 170 |
| Conread position: | 37-344 |
| Cow position: | chr27:18109976-18109668 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 18 |
| Conread position: | 37-471 |
| Cow position: | chr27:14681364-14680926 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 291 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 21, 169 |
| Conread position: | 38-224 |
| Cow position: | chr27:7596757-7596571 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 122, 12 |
| Conread position: | 38-226 |
| Cow position: | chr27:7142097-7141908 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 38-226 |
| Cow position: | chr27:21526254-21526065 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 131, 12 |
| Conread position: | 38-237 |
| Cow position: | chr27:57864-58064 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 136, 12 |
| Conread position: | 38-237 |
| Cow position: | chr27:30246466-30246668 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 17, 166 |
| Conread position: | 38-240 |
| Cow position: | chr27:7150230-7150028 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 125, 12 |
| Conread position: | 38-402 |
| Cow position: | chr27:2392232-2392593 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 257 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 125, 138 |
| Conread position: | 38-486 |
| Cow position: | chr27:3911819-3912286 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 65 |
| Conread position: | 38-486 |
| Cow position: | chr27:18467739-18467299 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 295 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 136, 200 |
| Conread position: | 38-486 |
| Cow position: | chr27:29451720-29452144 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 301 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 135, 12 |
| Conread position: | 38-486 |
| Cow position: | chr27:30988500-30988060 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 121, 9 |
| Conread position: | 38-491 |
| Cow position: | chr27:23877334-23877774 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 191, 18 |
| Conread position: | 40-491 |
| Cow position: | chr27:23052369-23052838 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 79 |
| Conread position: | 42-476 |
| Cow position: | chr27:23190237-23190672 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 308 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 104, 164 |
| Conread position: | 46-234 |
| Cow position: | chr27:29522768-29522957 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 117, 128 |
| Conread position: | 46-241 |
| Cow position: | chr27:10584795-10584599 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 136, 81 |
| Conread position: | 46-252 |
| Cow position: | chr27:7158384-7158179 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 117, 75 |
| Conread position: | 46-279 |
| Cow position: | chr27:7133287-7133053 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 195 |
| Conread position: | 47-197 |
| Cow position: | chr27:22568236-22568084 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 47-240 |
| Cow position: | chr27:7175204-7175011 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 116, 9 |
| Conread position: | 47-480 |
| Cow position: | chr27:29498501-29498951 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 112 |
| Conread position: | 47-486 |
| Cow position: | chr27:14139461-14139002 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 156 |
| Conread position: | 47-486 |
| Cow position: | chr27:21528147-21527712 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 8, 213 |
| Conread position: | 58-237 |
| Cow position: | chr27:22990299-22990120 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 124, 69 |
| Conread position: | 67-486 |
| Cow position: | chr27:30246961-30247369 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 97, 115 |
| Conread position: | 90-395 |
| Cow position: | chr27:21601001-21601302 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 87, 158 |
| Conread position: | 129-477 |
| Cow position: | chr27:7086136-7086481 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 133-486 |
| Cow position: | chr27:14151827-14152207 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 251-486 |
| Cow position: | chr27:14181750-14181506 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 88, 58 |
| Conread position: | 257-476 |
| Cow position: | chr27:14333755-14333521 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 90, 146 |
| Conread position: | 257-486 |
| Cow position: | chr27:22803603-22803836 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 88, 140 |
| Conread position: | 257-506 |
| Cow position: | chr27:22567831-22567566 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 88, 161 |
| Conread position: | 258-477 |
| Cow position: | chr27:29996024-29996258 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 87, 145 |
| Conread position: | 260-472 |
| Cow position: | chr27:530654-530880 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 84, 0 |
Show alignments to all cow chromosomes.